RNA–Protein interactions for RNA: ENST00000565990.2

SF3B3-206, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 967 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-206ENST00000565990 LAPTM4BQ86VI4 370 aa11.89□□□□□ -0.51
SF3B3-206ENST00000565990 ZNF248Q8NDW4 579 aa11.89□□□□□ -0.51
SF3B3-206ENST00000565990 PLPP5Q8NEB5 264 aa11.89□□□□□ -0.51
SF3B3-206ENST00000565990 NACC2Q96BF6 587 aa11.89□□□□□ -0.51
SF3B3-206ENST00000565990 TUBGCP3Q96CW5 907 aa11.89□□□□□ -0.51
SF3B3-206ENST00000565990 MAPKAP1Q9BPZ7 522 aa11.89□□□□□ -0.51
SF3B3-206ENST00000565990 COPS7BQ9H9Q2 264 aaPredicted RBP11.89□□□□□ -0.51
SF3B3-206ENST00000565990 LANCL2Q9NS86 450 aa11.89□□□□□ -0.51
SF3B3-206ENST00000565990 ASIC5Q9NY37 505 aa11.89□□□□□ -0.51
SF3B3-206ENST00000565990 TRPC4Q9UBN4 977 aa11.89□□□□□ -0.51
SF3B3-206ENST00000565990 CROTQ9UKG9 612 aa11.89□□□□□ -0.51
SF3B3-206ENST00000565990 POMPQ9Y244 141 aa11.89□□□□□ -0.51
SF3B3-206ENST00000565990 NCOR2Q9Y618 2525 aa11.89□□□□□ -0.51
SF3B3-206ENST00000565990 BLACEA4D250 179 aa11.88□□□□□ -0.51
SF3B3-206ENST00000565990 ZNF860A6NHJ4 632 aa11.88□□□□□ -0.51
SF3B3-206ENST00000565990 C1QTNF9BB2RNN3 333 aa11.88□□□□□ -0.51
SF3B3-206ENST00000565990 FAM227AF5H4B4 570 aa11.88□□□□□ -0.51
SF3B3-206ENST00000565990 PCDH7O60245 1069 aa11.88□□□□□ -0.51
SF3B3-206ENST00000565990 CTNSO60931 367 aa11.88□□□□□ -0.51
SF3B3-206ENST00000565990 GBAP04062 536 aa11.88□□□□□ -0.51
SF3B3-206ENST00000565990 CYC1P08574 325 aa11.88□□□□□ -0.51
SF3B3-206ENST00000565990 C1QTNF9P0C862 333 aa11.88□□□□□ -0.51
SF3B3-206ENST00000565990 RNH1P13489 461 aaKnown RBP11.88□□□□□ -0.51
SF3B3-206ENST00000565990 UQCRBP14927 111 aa11.88□□□□□ -0.51
SF3B3-206ENST00000565990 PCSK2P16519 638 aa11.88□□□□□ -0.51
SF3B3-206ENST00000565990 NCF2P19878 526 aaPredicted RBP11.88□□□□□ -0.51
SF3B3-206ENST00000565990 PAX7P23759 505 aa11.88□□□□□ -0.51
SF3B3-206ENST00000565990 PIK3R1P27986 724 aa11.88□□□□□ -0.51
SF3B3-206ENST00000565990 DLSTP36957 453 aa11.88□□□□□ -0.51
SF3B3-206ENST00000565990 XCR1P46094 333 aa11.88□□□□□ -0.51
SF3B3-206ENST00000565990 ATP4BP51164 291 aa11.88□□□□□ -0.51
SF3B3-206ENST00000565990 RPS15P62841 145 aaKnown RBP11.88□□□□□ -0.51
SF3B3-206ENST00000565990 SLC25A3Q00325 362 aa11.88□□□□□ -0.51
SF3B3-206ENST00000565990 OCA2Q04671 838 aa11.88□□□□□ -0.51
SF3B3-206ENST00000565990 CCNIQ14094 377 aa11.88□□□□□ -0.51
SF3B3-206ENST00000565990 NR6A1Q15406 480 aa11.88□□□□□ -0.51
SF3B3-206ENST00000565990 SPATS1Q496A3 300 aa11.88□□□□□ -0.51
SF3B3-206ENST00000565990 SLC9B1Q4ZJI4 515 aa11.88□□□□□ -0.51
SF3B3-206ENST00000565990 ATP6AP1LQ52LC2 224 aa11.88□□□□□ -0.51
SF3B3-206ENST00000565990 MLIPQ5VWP3 458 aa11.88□□□□□ -0.51
SF3B3-206ENST00000565990 CYP20A1Q6UW02 462 aa11.88□□□□□ -0.51
SF3B3-206ENST00000565990 IZUMO2Q6UXV1 221 aa11.88□□□□□ -0.51
SF3B3-206ENST00000565990 ZC3H7AQ8IWR0 971 aaKnown RBP11.88□□□□□ -0.51
SF3B3-206ENST00000565990 DEFB107AQ8IZN7 70 aa11.88□□□□□ -0.51
SF3B3-206ENST00000565990 ST13P4Q8IZP2 240 aaPredicted RBP11.88□□□□□ -0.51
SF3B3-206ENST00000565990 IL22RA1Q8N6P7 574 aa11.88□□□□□ -0.51
SF3B3-206ENST00000565990 KDF1Q8NAX2 398 aaPredicted RBP11.88□□□□□ -0.51
SF3B3-206ENST00000565990 OR2Y1Q8NGV0 311 aa11.88□□□□□ -0.51
SF3B3-206ENST00000565990 ADAMTS18Q8TE60 1221 aa11.88□□□□□ -0.51
SF3B3-206ENST00000565990 TBC1D20Q96BZ9 403 aa11.88□□□□□ -0.51
SF3B3-206ENST00000565990 PEX11GQ96HA9 241 aa11.88□□□□□ -0.51
SF3B3-206ENST00000565990 TSC22D3Q99576 134 aa11.88□□□□□ -0.51
SF3B3-206ENST00000565990 SPSB2Q99619 263 aa11.88□□□□□ -0.51
SF3B3-206ENST00000565990 EFHD1Q9BUP0 239 aa11.88□□□□□ -0.51
SF3B3-206ENST00000565990 WDR55Q9H6Y2 383 aaPredicted RBP11.88□□□□□ -0.51
SF3B3-206ENST00000565990 EFCAB1Q9HAE3 211 aa11.88□□□□□ -0.51
SF3B3-206ENST00000565990 C14orf105Q9NVL8 296 aa11.88□□□□□ -0.51
SF3B3-206ENST00000565990 LYARQ9NX58 379 aaKnown RBP11.88□□□□□ -0.51
SF3B3-206ENST00000565990 HCN3Q9P1Z3 774 aa11.88□□□□□ -0.51
SF3B3-206ENST00000565990 CTSFQ9UBX1 484 aa11.88□□□□□ -0.51
SF3B3-206ENST00000565990 GPN3Q9UHW5 284 aaPredicted RBP11.88□□□□□ -0.51
SF3B3-206ENST00000565990 PHF11Q9UIL8 331 aa11.88□□□□□ -0.51
SF3B3-206ENST00000565990 KCND3Q9UK17 655 aa11.88□□□□□ -0.51
SF3B3-206ENST00000565990 NXT1Q9UKK6 140 aaKnown RBP11.88□□□□□ -0.51
SF3B3-206ENST00000565990 CNOT11Q9UKZ1 510 aaKnown RBP11.88□□□□□ -0.51
SF3B3-206ENST00000565990 TCFL5Q9UL49 500 aa11.88□□□□□ -0.51
SF3B3-206ENST00000565990 ATG4BQ9Y4P1 393 aa11.88□□□□□ -0.51
SF3B3-206ENST00000565990 ZFHX4Q86UP3 3567 aa11.88□□□□□ -0.51
SF3B3-206ENST00000565990 C9J4A7 227 aa11.87□□□□□ -0.51
SF3B3-206ENST00000565990 TAF4O00268 1085 aa11.87□□□□□ -0.51
SF3B3-206ENST00000565990 EFSO43281 561 aa11.87□□□□□ -0.51
SF3B3-206ENST00000565990 GUCY1B2O75343 617 aa11.87□□□□□ -0.51
SF3B3-206ENST00000565990 MYO1DO94832 1006 aa11.87□□□□□ -0.51
SF3B3-206ENST00000565990 LYNP07948 512 aa11.87□□□□□ -0.51
SF3B3-206ENST00000565990 FHP07954 510 aa11.87□□□□□ -0.51
SF3B3-206ENST00000565990 ANXA4P09525 319 aaPredicted RBP11.87□□□□□ -0.51
SF3B3-206ENST00000565990 PRPS2P11908 318 aa11.87□□□□□ -0.51
SF3B3-206ENST00000565990 BCKDHAP12694 445 aa11.87□□□□□ -0.51
SF3B3-206ENST00000565990 LBPP18428 481 aa11.87□□□□□ -0.51
SF3B3-206ENST00000565990 EPHA3P29320 983 aa11.87□□□□□ -0.51
SF3B3-206ENST00000565990 EFNA3P52797 238 aa11.87□□□□□ -0.51
SF3B3-206ENST00000565990 MAPK12P53778 367 aa11.87□□□□□ -0.51
SF3B3-206ENST00000565990 HSD17B7P56937 341 aa11.87□□□□□ -0.51
SF3B3-206ENST00000565990 ERVK-8P63133 956 aa11.87□□□□□ -0.51
SF3B3-206ENST00000565990 MED21Q13503 144 aa11.87□□□□□ -0.51
SF3B3-206ENST00000565990 DNASE1L3Q13609 305 aa11.87□□□□□ -0.51
SF3B3-206ENST00000565990 CYLC2Q14093 348 aaPredicted RBP11.87□□□□□ -0.51
SF3B3-206ENST00000565990 ERV3-1Q14264 604 aa11.87□□□□□ -0.51
SF3B3-206ENST00000565990 SSPNQ14714 243 aa11.87□□□□□ -0.51
SF3B3-206ENST00000565990 CRTC2Q53ET0 693 aaPredicted RBP11.87□□□□□ -0.51
SF3B3-206ENST00000565990 OGFRL1Q5TC84 451 aaPredicted RBP11.87□□□□□ -0.51
SF3B3-206ENST00000565990 C18orf63Q68DL7 685 aa11.87□□□□□ -0.51
SF3B3-206ENST00000565990 UNQ6494/PRO21346Q6UXR6 183 aa11.87□□□□□ -0.51
SF3B3-206ENST00000565990 HACD2Q6Y1H2 254 aa11.87□□□□□ -0.51
SF3B3-206ENST00000565990 BNC2Q6ZN30 1099 aaPredicted RBP11.87□□□□□ -0.51
SF3B3-206ENST00000565990 ZNF595Q8IYB9 648 aa11.87□□□□□ -0.51
SF3B3-206ENST00000565990 TMEM52Q8NDY8 209 aa11.87□□□□□ -0.51
SF3B3-206ENST00000565990 ADCY4Q8NFM4 1077 aa11.87□□□□□ -0.51
SF3B3-206ENST00000565990 CEP70Q8NHQ1 597 aa11.87□□□□□ -0.51
SF3B3-206ENST00000565990 FBXO27Q8NI29 283 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms