RNA–Protein interactions for RNA: ENST00000562866.1

VPS9D1-AS1-202, VPS9D1 antisense RNA 1, humanhuman

TSL 2 BASIC

Gene VPS9D1-AS1, Length 1,753 nt, Biotype antisense RNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-AS1-202ENST00000562866 TP53BP2Q13625 1128 aa20.23■□□□□ 0.83
VPS9D1-AS1-202ENST00000562866 BHLHB9Q6PI77 547 aa20.23■□□□□ 0.83
VPS9D1-AS1-202ENST00000562866 DHRS4L2Q6PKH6 230 aa20.23■□□□□ 0.83
VPS9D1-AS1-202ENST00000562866 TMEM64Q6YI46 380 aa20.23■□□□□ 0.83
VPS9D1-AS1-202ENST00000562866 ACOT4Q8N9L9 421 aa20.23■□□□□ 0.83
VPS9D1-AS1-202ENST00000562866 SFXN5Q8TD22 340 aa20.23■□□□□ 0.83
VPS9D1-AS1-202ENST00000562866 IPCEF1Q8WWN9 437 aaPredicted RBP20.23■□□□□ 0.83
VPS9D1-AS1-202ENST00000562866 SGCDQ92629 289 aa20.23■□□□□ 0.83
VPS9D1-AS1-202ENST00000562866 PROX1Q92786 737 aa20.23■□□□□ 0.83
VPS9D1-AS1-202ENST00000562866 DNASE1L2Q92874 299 aa20.23■□□□□ 0.83
VPS9D1-AS1-202ENST00000562866 MOAP1Q96BY2 351 aa20.23■□□□□ 0.83
VPS9D1-AS1-202ENST00000562866 CCDC90BQ9GZT6 254 aa20.23■□□□□ 0.83
VPS9D1-AS1-202ENST00000562866 GLIPR2Q9H4G4 154 aa20.23■□□□□ 0.83
VPS9D1-AS1-202ENST00000562866 P2RX2Q9UBL9 471 aa20.23■□□□□ 0.83
VPS9D1-AS1-202ENST00000562866 ASB4Q9Y574 426 aa20.23■□□□□ 0.83
VPS9D1-AS1-202ENST00000562866 PRAMEF25A6NGN4 478 aa20.22■□□□□ 0.83
VPS9D1-AS1-202ENST00000562866 HMGN4O00479 90 aa20.22■□□□□ 0.83
VPS9D1-AS1-202ENST00000562866 GADD45GO95257 159 aa20.22■□□□□ 0.83
VPS9D1-AS1-202ENST00000562866 FMO3P31513 532 aa20.22■□□□□ 0.83
VPS9D1-AS1-202ENST00000562866 NCBP2P52298 156 aaKnown RBP eCLIP20.22■□□□□ 0.83
VPS9D1-AS1-202ENST00000562866 RPS15AP62244 130 aaKnown RBP20.22■□□□□ 0.83
VPS9D1-AS1-202ENST00000562866 FBXO43Q4G163 708 aa20.22■□□□□ 0.83
VPS9D1-AS1-202ENST00000562866 ZNF605Q86T29 641 aa20.22■□□□□ 0.83
VPS9D1-AS1-202ENST00000562866 OR4E2Q8NGC2 313 aa20.22■□□□□ 0.83
VPS9D1-AS1-202ENST00000562866 OR8K5Q8NH50 307 aa20.22■□□□□ 0.83
VPS9D1-AS1-202ENST00000562866 BMFQ96LC9 184 aa20.22■□□□□ 0.83
VPS9D1-AS1-202ENST00000562866 SRMSQ9H3Y6 488 aa20.22■□□□□ 0.83
VPS9D1-AS1-202ENST00000562866 PAK1IP1Q9NWT1 392 aaPredicted RBP20.22■□□□□ 0.83
VPS9D1-AS1-202ENST00000562866 LYARQ9NX58 379 aaKnown RBP20.22■□□□□ 0.83
VPS9D1-AS1-202ENST00000562866 ENTPD4Q9Y227 616 aa20.22■□□□□ 0.83
VPS9D1-AS1-202ENST00000562866 HCN4Q9Y3Q4 1203 aa20.22■□□□□ 0.83
VPS9D1-AS1-202ENST00000562866 PPM1DO15297 605 aa20.21■□□□□ 0.83
VPS9D1-AS1-202ENST00000562866 ZW10O43264 779 aa20.21■□□□□ 0.83
VPS9D1-AS1-202ENST00000562866 XPNPEP2O43895 674 aa20.21■□□□□ 0.83
VPS9D1-AS1-202ENST00000562866 FAM20BO75063 409 aa20.21■□□□□ 0.83
VPS9D1-AS1-202ENST00000562866 SERPINB7O75635 380 aa20.21■□□□□ 0.83
VPS9D1-AS1-202ENST00000562866 CCNB2O95067 398 aa20.21■□□□□ 0.83
VPS9D1-AS1-202ENST00000562866 ATE1O95260 518 aa20.21■□□□□ 0.83
VPS9D1-AS1-202ENST00000562866 NDUFV2P19404 249 aa20.21■□□□□ 0.83
VPS9D1-AS1-202ENST00000562866 CD247P20963 164 aa20.21■□□□□ 0.83
VPS9D1-AS1-202ENST00000562866 MATN1P21941 496 aa20.21■□□□□ 0.83
VPS9D1-AS1-202ENST00000562866 PPP2R1BP30154 601 aa20.21■□□□□ 0.83
VPS9D1-AS1-202ENST00000562866 LTBRP36941 435 aa20.21■□□□□ 0.83
VPS9D1-AS1-202ENST00000562866 KHKP50053 298 aa20.21■□□□□ 0.83
VPS9D1-AS1-202ENST00000562866 SLC35A2P78381 396 aa20.21■□□□□ 0.83
VPS9D1-AS1-202ENST00000562866 TJAP1Q5JTD0 557 aa20.21■□□□□ 0.83
VPS9D1-AS1-202ENST00000562866 RD3Q7Z3Z2 195 aa20.21■□□□□ 0.83
VPS9D1-AS1-202ENST00000562866 PAQR7Q86WK9 346 aa20.21■□□□□ 0.83
VPS9D1-AS1-202ENST00000562866 SVOPQ8N4V2 548 aa20.21■□□□□ 0.83
VPS9D1-AS1-202ENST00000562866 SMRP1Q8NCR6 262 aa20.21■□□□□ 0.83
VPS9D1-AS1-202ENST00000562866 ACER3Q9NUN7 267 aa20.21■□□□□ 0.83
VPS9D1-AS1-202ENST00000562866 GIMAP4Q9NUV9 329 aa20.21■□□□□ 0.83
VPS9D1-AS1-202ENST00000562866 KLF15Q9UIH9 416 aa20.21■□□□□ 0.83
VPS9D1-AS1-202ENST00000562866 COL4A2P08572 1712 aa20.21■□□□□ 0.83
VPS9D1-AS1-202ENST00000562866 ZNF99A8MXY4 864 aaPredicted RBP20.21■□□□□ 0.83
VPS9D1-AS1-202ENST00000562866 TOR1BO14657 336 aa20.21■□□□□ 0.83
VPS9D1-AS1-202ENST00000562866 SLC28A2O43868 658 aa20.21■□□□□ 0.83
VPS9D1-AS1-202ENST00000562866 B4GALT2O60909 372 aa20.21■□□□□ 0.83
VPS9D1-AS1-202ENST00000562866 MFN2O95140 757 aa20.21■□□□□ 0.83
VPS9D1-AS1-202ENST00000562866 CCNA2P20248 432 aa20.21■□□□□ 0.83
VPS9D1-AS1-202ENST00000562866 PCMT1P22061 227 aa20.21■□□□□ 0.83
VPS9D1-AS1-202ENST00000562866 ACSL1P33121 698 aa20.21■□□□□ 0.83
VPS9D1-AS1-202ENST00000562866 GGT2P36268 569 aa20.21■□□□□ 0.83
VPS9D1-AS1-202ENST00000562866 ACTR1BP42025 376 aa20.21■□□□□ 0.83
VPS9D1-AS1-202ENST00000562866 LIMS1P48059 325 aa20.21■□□□□ 0.83
VPS9D1-AS1-202ENST00000562866 TPMTP51580 245 aa20.21■□□□□ 0.83
VPS9D1-AS1-202ENST00000562866 ACTR1AP61163 376 aa20.21■□□□□ 0.83
VPS9D1-AS1-202ENST00000562866 RGS1Q08116 209 aa20.21■□□□□ 0.83
VPS9D1-AS1-202ENST00000562866 GNA13Q14344 377 aa20.21■□□□□ 0.83
VPS9D1-AS1-202ENST00000562866 KIR2DS3Q14952 304 aa20.21■□□□□ 0.83
VPS9D1-AS1-202ENST00000562866 NPTX1Q15818 432 aa20.21■□□□□ 0.83
VPS9D1-AS1-202ENST00000562866 KRT73Q86Y46 540 aa20.21■□□□□ 0.83
VPS9D1-AS1-202ENST00000562866 OR52J3Q8NH60 311 aa20.21■□□□□ 0.83
VPS9D1-AS1-202ENST00000562866 RPLP0P6Q8NHW5 317 aa20.21■□□□□ 0.83
VPS9D1-AS1-202ENST00000562866 PHF10Q8WUB8 498 aaKnown RBP20.21■□□□□ 0.83
VPS9D1-AS1-202ENST00000562866 RAB8BQ92930 207 aa20.21■□□□□ 0.83
VPS9D1-AS1-202ENST00000562866 TSACCQ96A04 125 aaPredicted RBP20.21■□□□□ 0.83
VPS9D1-AS1-202ENST00000562866 ZNF624Q9P2J8 865 aaPredicted RBP20.21■□□□□ 0.83
VPS9D1-AS1-202ENST00000562866 SNX11Q9Y5W9 270 aa20.21■□□□□ 0.83
VPS9D1-AS1-202ENST00000562866 A0A1W2PR48 441 aa20.2■□□□□ 0.82
VPS9D1-AS1-202ENST00000562866 AK4P27144 223 aaPredicted RBP20.2■□□□□ 0.82
VPS9D1-AS1-202ENST00000562866 EPHA2P29317 976 aa20.2■□□□□ 0.82
VPS9D1-AS1-202ENST00000562866 MVKQ03426 396 aa20.2■□□□□ 0.82
VPS9D1-AS1-202ENST00000562866 PIGFQ07326 219 aa20.2■□□□□ 0.82
VPS9D1-AS1-202ENST00000562866 DUSP7Q16829 419 aa20.2■□□□□ 0.82
VPS9D1-AS1-202ENST00000562866 RPS26P11Q5JNZ5 115 aaPredicted RBP20.2■□□□□ 0.82
VPS9D1-AS1-202ENST00000562866 SLC44A2Q8IWA5 706 aaPredicted RBP20.2■□□□□ 0.82
VPS9D1-AS1-202ENST00000562866 TAGAPQ8N103 731 aa20.2■□□□□ 0.82
VPS9D1-AS1-202ENST00000562866 DEPDC4Q8N2C3 294 aa20.2■□□□□ 0.82
VPS9D1-AS1-202ENST00000562866 GPN2Q9H9Y4 310 aaPredicted RBP20.2■□□□□ 0.82
VPS9D1-AS1-202ENST00000562866 ZCCHC3Q9NUD5 404 aaKnown RBP20.2■□□□□ 0.82
VPS9D1-AS1-202ENST00000562866 TRNAU1APQ9NX07 287 aaKnown RBP20.2■□□□□ 0.82
VPS9D1-AS1-202ENST00000562866 WARS2Q9UGM6 360 aaKnown RBP20.2■□□□□ 0.82
VPS9D1-AS1-202ENST00000562866 KCND3Q9UK17 655 aa20.2■□□□□ 0.82
VPS9D1-AS1-202ENST00000562866 PNMA8BQ9ULN7 279 aaPredicted RBP20.2■□□□□ 0.82
VPS9D1-AS1-202ENST00000562866 CA5BQ9Y2D0 317 aa20.2■□□□□ 0.82
VPS9D1-AS1-202ENST00000562866 PCDHGA6Q9Y5G7 932 aa20.2■□□□□ 0.82
VPS9D1-AS1-202ENST00000562866 HS3ST3A1Q9Y663 406 aa20.2■□□□□ 0.82
VPS9D1-AS1-202ENST00000562866 PLXND1Q9Y4D7 1925 aa20.2■□□□□ 0.82
VPS9D1-AS1-202ENST00000562866 TCRBV21S2A2A0A5A6 115 aa20.19■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 128.7 ms