RNA–Protein interactions for RNA: ENST00000561354.1

CARMIL3-204, Transcript of capping protein regulator and myosin 1 linker 3, humanhuman

TSL 4

Gene CARMIL3, Length 564 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CARMIL3-204ENST00000561354 ADNP2Q6IQ32 1131 aa10.92□□□□□ -0.66
CARMIL3-204ENST00000561354 ZZZ3Q8IYH5 903 aa10.92□□□□□ -0.66
CARMIL3-204ENST00000561354 NOA1Q8NC60 698 aaKnown RBP10.92□□□□□ -0.66
CARMIL3-204ENST00000561354 PTCD3Q96EY7 689 aaKnown RBP10.92□□□□□ -0.66
CARMIL3-204ENST00000561354 VPS39Q96JC1 886 aa10.92□□□□□ -0.66
CARMIL3-204ENST00000561354 F2RL3Q96RI0 385 aa10.92□□□□□ -0.66
CARMIL3-204ENST00000561354 TMEM79Q9BSE2 394 aa10.92□□□□□ -0.66
CARMIL3-204ENST00000561354 TBCDQ9BTW9 1192 aa10.92□□□□□ -0.66
CARMIL3-204ENST00000561354 EFCAB11Q9BUY7 163 aa10.92□□□□□ -0.66
CARMIL3-204ENST00000561354 DERL2Q9GZP9 239 aa10.92□□□□□ -0.66
CARMIL3-204ENST00000561354 DDX47Q9H0S4 455 aaKnown RBP10.92□□□□□ -0.66
CARMIL3-204ENST00000561354 CLEC4MQ9H2X3 399 aaPredicted RBP10.92□□□□□ -0.66
CARMIL3-204ENST00000561354 CNOT10Q9H9A5 744 aaKnown RBP10.92□□□□□ -0.66
CARMIL3-204ENST00000561354 SEMA4BQ9NPR2 832 aaPredicted RBP10.92□□□□□ -0.66
CARMIL3-204ENST00000561354 RASSF1Q9NS23 344 aa10.92□□□□□ -0.66
CARMIL3-204ENST00000561354 DNAJC11Q9NVH1 559 aa10.92□□□□□ -0.66
CARMIL3-204ENST00000561354 MOCS1Q9NZB8 636 aa10.92□□□□□ -0.66
CARMIL3-204ENST00000561354 COPS7AQ9UBW8 275 aa10.92□□□□□ -0.66
CARMIL3-204ENST00000561354 SEC23IPQ9Y6Y8 1000 aaKnown RBP10.92□□□□□ -0.66
CARMIL3-204ENST00000561354 SPACA6W5XKT8 324 aa10.92□□□□□ -0.66
CARMIL3-204ENST00000561354 NF1P21359 2839 aa10.91□□□□□ -0.66
CARMIL3-204ENST00000561354 ITPR3Q14573 2671 aa10.91□□□□□ -0.66
CARMIL3-204ENST00000561354 HSPB2A8KAH6 182 aa10.91□□□□□ -0.66
CARMIL3-204ENST00000561354 CCDC188H7C350 402 aa10.91□□□□□ -0.66
CARMIL3-204ENST00000561354 FAM155BO75949 473 aa10.91□□□□□ -0.66
CARMIL3-204ENST00000561354 SCELO95171 688 aa10.91□□□□□ -0.66
CARMIL3-204ENST00000561354 WISP3O95389 354 aaPredicted RBP10.91□□□□□ -0.66
CARMIL3-204ENST00000561354 IGKV3-11P04433 115 aa10.91□□□□□ -0.66
CARMIL3-204ENST00000561354 ATP5A1P25705 553 aaKnown RBP10.91□□□□□ -0.66
CARMIL3-204ENST00000561354 IGLV3-21P80748 117 aaPredicted RBP10.91□□□□□ -0.66
CARMIL3-204ENST00000561354 ASPHQ12797 758 aa10.91□□□□□ -0.66
CARMIL3-204ENST00000561354 BIKQ13323 160 aa10.91□□□□□ -0.66
CARMIL3-204ENST00000561354 LAPTM5Q13571 262 aa10.91□□□□□ -0.66
CARMIL3-204ENST00000561354 DOC2AQ14183 400 aa10.91□□□□□ -0.66
CARMIL3-204ENST00000561354 E2F2Q14209 437 aa10.91□□□□□ -0.66
CARMIL3-204ENST00000561354 TBCCQ15814 346 aa10.91□□□□□ -0.66
CARMIL3-204ENST00000561354 HSPB2Q16082 182 aa10.91□□□□□ -0.66
CARMIL3-204ENST00000561354 PAGE2BQ5JRK9 111 aa10.91□□□□□ -0.66
CARMIL3-204ENST00000561354 C8orf74Q6P047 294 aa10.91□□□□□ -0.66
CARMIL3-204ENST00000561354 ADGRD1Q6QNK2 874 aa10.91□□□□□ -0.66
CARMIL3-204ENST00000561354 ZNF793Q6ZN11 406 aa10.91□□□□□ -0.66
CARMIL3-204ENST00000561354 WDR53Q7Z5U6 358 aaPredicted RBP10.91□□□□□ -0.66
CARMIL3-204ENST00000561354 UBE3DQ7Z6J8 389 aa10.91□□□□□ -0.66
CARMIL3-204ENST00000561354 DND1Q8IYX4 353 aaKnown RBP10.91□□□□□ -0.66
CARMIL3-204ENST00000561354 LRRC25Q8N386 305 aaPredicted RBP10.91□□□□□ -0.66
CARMIL3-204ENST00000561354 FBXW8Q8N3Y1 598 aa10.91□□□□□ -0.66
CARMIL3-204ENST00000561354 SLC15A4Q8N697 577 aa10.91□□□□□ -0.66
CARMIL3-204ENST00000561354 ACOT4Q8N9L9 421 aa10.91□□□□□ -0.66
CARMIL3-204ENST00000561354 SLC22A8Q8TCC7 542 aa10.91□□□□□ -0.66
CARMIL3-204ENST00000561354 PAQR8Q8TEZ7 354 aa10.91□□□□□ -0.66
CARMIL3-204ENST00000561354 SREK1Q8WXA9 508 aaKnown RBP10.91□□□□□ -0.66
CARMIL3-204ENST00000561354 ANKRD9Q96BM1 317 aaPredicted RBP10.91□□□□□ -0.66
CARMIL3-204ENST00000561354 PWWP2AQ96N64 755 aa10.91□□□□□ -0.66
CARMIL3-204ENST00000561354 MAPKAP1Q9BPZ7 522 aa10.91□□□□□ -0.66
CARMIL3-204ENST00000561354 MCMBPQ9BTE3 642 aa10.91□□□□□ -0.66
CARMIL3-204ENST00000561354 CNPPD1Q9BV87 410 aa10.91□□□□□ -0.66
CARMIL3-204ENST00000561354 ACBD3Q9H3P7 528 aa10.91□□□□□ -0.66
CARMIL3-204ENST00000561354 LIME1Q9H400 295 aa10.91□□□□□ -0.66
CARMIL3-204ENST00000561354 RHOJQ9H4E5 214 aa10.91□□□□□ -0.66
CARMIL3-204ENST00000561354 EXO5Q9H790 373 aa10.91□□□□□ -0.66
CARMIL3-204ENST00000561354 ZNF703Q9H7S9 590 aaPredicted RBP10.91□□□□□ -0.66
CARMIL3-204ENST00000561354 ACKR4Q9NPB9 350 aa10.91□□□□□ -0.66
CARMIL3-204ENST00000561354 QPCTLQ9NXS2 382 aa10.91□□□□□ -0.66
CARMIL3-204ENST00000561354 ALKBH4Q9NXW9 302 aa10.91□□□□□ -0.66
CARMIL3-204ENST00000561354 NSMCE4AQ9NXX6 385 aa10.91□□□□□ -0.66
CARMIL3-204ENST00000561354 WWOXQ9NZC7 414 aa10.91□□□□□ -0.66
CARMIL3-204ENST00000561354 SPRR3Q9UBC9 169 aa10.91□□□□□ -0.66
CARMIL3-204ENST00000561354 BOKQ9UMX3 212 aaPredicted RBP10.91□□□□□ -0.66
CARMIL3-204ENST00000561354 NCF1BA6NI72 391 aaPredicted RBP10.9□□□□□ -0.66
CARMIL3-204ENST00000561354 NCF1CA8MVU1 366 aaPredicted RBP10.9□□□□□ -0.66
CARMIL3-204ENST00000561354 PROM1O43490 865 aa10.9□□□□□ -0.66
CARMIL3-204ENST00000561354 STK16O75716 305 aa10.9□□□□□ -0.66
CARMIL3-204ENST00000561354 RHOXF2BP0C7M4 288 aa10.9□□□□□ -0.66
CARMIL3-204ENST00000561354 COX7A2P14406 83 aa10.9□□□□□ -0.66
CARMIL3-204ENST00000561354 NCF1P14598 390 aaPredicted RBP10.9□□□□□ -0.66
CARMIL3-204ENST00000561354 FOSL1P15407 271 aa10.9□□□□□ -0.66
CARMIL3-204ENST00000561354 CD22P20273 847 aa10.9□□□□□ -0.66
CARMIL3-204ENST00000561354 HIST1H1TP22492 207 aaPredicted RBP10.9□□□□□ -0.66
CARMIL3-204ENST00000561354 DNASE1P24855 282 aa10.9□□□□□ -0.66
CARMIL3-204ENST00000561354 PIGAP37287 484 aa10.9□□□□□ -0.66
CARMIL3-204ENST00000561354 CASP2P42575 452 aa10.9□□□□□ -0.66
CARMIL3-204ENST00000561354 STT3AP46977 705 aa10.9□□□□□ -0.66
CARMIL3-204ENST00000561354 ARL4CP56559 192 aa10.9□□□□□ -0.66
CARMIL3-204ENST00000561354 CEBPEQ15744 281 aa10.9□□□□□ -0.66
CARMIL3-204ENST00000561354 PDK4Q16654 411 aa10.9□□□□□ -0.66
CARMIL3-204ENST00000561354 HIST2H2ACQ16777 129 aaPredicted RBP10.9□□□□□ -0.66
CARMIL3-204ENST00000561354 FBXL19-AS1Q494R0 122 aa10.9□□□□□ -0.66
CARMIL3-204ENST00000561354 TMEM35AQ53FP2 167 aa10.9□□□□□ -0.66
CARMIL3-204ENST00000561354 HIST2H2AA3Q6FI13 130 aa10.9□□□□□ -0.66
CARMIL3-204ENST00000561354 SULT1C3Q6IMI6 304 aa10.9□□□□□ -0.66
CARMIL3-204ENST00000561354 LYPD8Q6UX82 237 aa10.9□□□□□ -0.66
CARMIL3-204ENST00000561354 SEM1Q6ZVN7 128 aa10.9□□□□□ -0.66
CARMIL3-204ENST00000561354 SYDE1Q6ZW31 735 aaPredicted RBP10.9□□□□□ -0.66
CARMIL3-204ENST00000561354 GPSM1Q86YR5 675 aa10.9□□□□□ -0.66
CARMIL3-204ENST00000561354 EIF1ADQ8N9N8 165 aaKnown RBP10.9□□□□□ -0.66
CARMIL3-204ENST00000561354 ZNF473Q8WTR7 871 aaKnown RBP10.9□□□□□ -0.66
CARMIL3-204ENST00000561354 FAM222BQ8WU58 562 aa10.9□□□□□ -0.66
CARMIL3-204ENST00000561354 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP10.9□□□□□ -0.66
CARMIL3-204ENST00000561354 SPACA9Q96E40 222 aaPredicted RBP10.9□□□□□ -0.66
CARMIL3-204ENST00000561354 RMND5BQ96G75 393 aaPredicted RBP10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms