RNA–Protein interactions for RNA: ENST00000559494.1

TSPAN3-207, Transcript of tetraspanin 3, humanhuman

TSL 5 BASIC

Gene TSPAN3, Length 1,326 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-207ENST00000559494 HAO1Q9UJM8 370 aa18.99■□□□□ 0.63
TSPAN3-207ENST00000559494 PCDHA9Q9Y5H5 950 aa18.99■□□□□ 0.63
TSPAN3-207ENST00000559494 GUCY1B2O75343 617 aa18.98■□□□□ 0.63
TSPAN3-207ENST00000559494 SEC22BO75396 215 aa18.98■□□□□ 0.63
TSPAN3-207ENST00000559494 SNUPNO95149 360 aaKnown RBP18.98■□□□□ 0.63
TSPAN3-207ENST00000559494 GPR75O95800 540 aa18.98■□□□□ 0.63
TSPAN3-207ENST00000559494 ITGAMP11215 1152 aa18.98■□□□□ 0.63
TSPAN3-207ENST00000559494 ICAM2P13598 275 aa18.98■□□□□ 0.63
TSPAN3-207ENST00000559494 NR1D1P20393 614 aa18.98■□□□□ 0.63
TSPAN3-207ENST00000559494 SLC26A5P58743 744 aa18.98■□□□□ 0.63
TSPAN3-207ENST00000559494 SERTAD2Q14140 314 aa18.98■□□□□ 0.63
TSPAN3-207ENST00000559494 BTBD16Q32M84 506 aa18.98■□□□□ 0.63
TSPAN3-207ENST00000559494 TCTN3Q6NUS6 607 aa18.98■□□□□ 0.63
TSPAN3-207ENST00000559494 C9orf43Q8TAL5 461 aaPredicted RBP18.98■□□□□ 0.63
TSPAN3-207ENST00000559494 M1APQ8TC57 530 aa18.98■□□□□ 0.63
TSPAN3-207ENST00000559494 C16orf78Q8WTQ4 265 aa18.98■□□□□ 0.63
TSPAN3-207ENST00000559494 METTL2AQ96IZ6 378 aaKnown RBP18.98■□□□□ 0.63
TSPAN3-207ENST00000559494 EBPLQ9BY08 206 aa18.98■□□□□ 0.63
TSPAN3-207ENST00000559494 ACBD3Q9H3P7 528 aa18.98■□□□□ 0.63
TSPAN3-207ENST00000559494 LRTM1Q9HBL6 345 aa18.98■□□□□ 0.63
TSPAN3-207ENST00000559494 ZNF71Q9NQZ8 489 aaPredicted RBP18.98■□□□□ 0.63
TSPAN3-207ENST00000559494 PNPOQ9NVS9 261 aa18.98■□□□□ 0.63
TSPAN3-207ENST00000559494 CES1P1Q9UKY3 287 aa18.98■□□□□ 0.63
TSPAN3-207ENST00000559494 TP53TG5Q9Y2B4 290 aa18.98■□□□□ 0.63
TSPAN3-207ENST00000559494 DLGAP4Q9Y2H0 992 aa18.98■□□□□ 0.63
TSPAN3-207ENST00000559494 COL6A6A6NMZ7 2263 aa18.97■□□□□ 0.63
TSPAN3-207ENST00000559494 GNG14A0A1W2PPG7 69 aa18.97■□□□□ 0.63
TSPAN3-207ENST00000559494 SAGE2PA6NJ88 616 aa18.97■□□□□ 0.63
TSPAN3-207ENST00000559494 LSM1O15116 133 aaKnown RBP18.97■□□□□ 0.63
TSPAN3-207ENST00000559494 KALRNO60229 2985 aa18.97■□□□□ 0.63
TSPAN3-207ENST00000559494 SNNO75324 88 aaPredicted RBP18.97■□□□□ 0.63
TSPAN3-207ENST00000559494 SKAP2O75563 359 aaPredicted RBP18.97■□□□□ 0.63
TSPAN3-207ENST00000559494 IFNA16P05015 189 aa18.97■□□□□ 0.63
TSPAN3-207ENST00000559494 ANXA4P09525 319 aaPredicted RBP18.97■□□□□ 0.63
TSPAN3-207ENST00000559494 SFTPCP11686 197 aa18.97■□□□□ 0.63
TSPAN3-207ENST00000559494 RPL14P50914 215 aaKnown RBP18.97■□□□□ 0.63
TSPAN3-207ENST00000559494 TAS2R50P59544 299 aa18.97■□□□□ 0.63
TSPAN3-207ENST00000559494 PPP2R2AP63151 447 aa18.97■□□□□ 0.63
TSPAN3-207ENST00000559494 NR6A1Q15406 480 aa18.97■□□□□ 0.63
TSPAN3-207ENST00000559494 EXT1Q16394 746 aa18.97■□□□□ 0.63
TSPAN3-207ENST00000559494 RFTN2Q52LD8 501 aaPredicted RBP18.97■□□□□ 0.63
TSPAN3-207ENST00000559494 XKR7Q5GH72 579 aa18.97■□□□□ 0.63
TSPAN3-207ENST00000559494 NOXRED1Q6NXP6 359 aa18.97■□□□□ 0.63
TSPAN3-207ENST00000559494 TRIM42Q8IWZ5 723 aa18.97■□□□□ 0.63
TSPAN3-207ENST00000559494 FAM76AQ8TAV0 307 aa18.97■□□□□ 0.63
TSPAN3-207ENST00000559494 RAB3IL1Q8TBN0 382 aa18.97■□□□□ 0.63
TSPAN3-207ENST00000559494 ZNF75CPQ92670 426 aaPredicted RBP18.97■□□□□ 0.63
TSPAN3-207ENST00000559494 SMAD5Q99717 465 aaKnown RBP18.97■□□□□ 0.63
TSPAN3-207ENST00000559494 SLC25A18Q9H1K4 315 aa18.97■□□□□ 0.63
TSPAN3-207ENST00000559494 ADAP2Q9NPF8 381 aa18.97■□□□□ 0.63
TSPAN3-207ENST00000559494 THAP1Q9NVV9 213 aa18.97■□□□□ 0.63
TSPAN3-207ENST00000559494 HEY2Q9UBP5 337 aa18.97■□□□□ 0.63
TSPAN3-207ENST00000559494 POLR3HQ9Y535 204 aaPredicted RBP18.97■□□□□ 0.63
TSPAN3-207ENST00000559494 A0A1W2PS29 197 aa18.96■□□□□ 0.63
TSPAN3-207ENST00000559494 C1orf226A1L170 272 aa18.96■□□□□ 0.63
TSPAN3-207ENST00000559494 MYO1DO94832 1006 aa18.96■□□□□ 0.63
TSPAN3-207ENST00000559494 JUNP05412 331 aaKnown RBP18.96■□□□□ 0.63
TSPAN3-207ENST00000559494 IL3P08700 152 aa18.96■□□□□ 0.63
TSPAN3-207ENST00000559494 BIKQ13323 160 aa18.96■□□□□ 0.63
TSPAN3-207ENST00000559494 ELAVL1Q15717 326 aaKnown RBP18.96■□□□□ 0.63
TSPAN3-207ENST00000559494 ATG16L1Q676U5 607 aa18.96■□□□□ 0.63
TSPAN3-207ENST00000559494 OR52E8Q6IFG1 317 aa18.96■□□□□ 0.63
TSPAN3-207ENST00000559494 DGAT2L6Q6ZPD8 337 aa18.96■□□□□ 0.63
TSPAN3-207ENST00000559494 PUM2Q8TB72 1066 aaKnown RBP eCLIP18.96■□□□□ 0.631e-7■■■□□ 17.5
TSPAN3-207ENST00000559494 BRIX1Q8TDN6 353 aaKnown RBP18.96■□□□□ 0.63
TSPAN3-207ENST00000559494 PTPMT1Q8WUK0 201 aaPredicted RBP18.96■□□□□ 0.63
TSPAN3-207ENST00000559494 PPWD1Q96BP3 646 aaKnown RBP18.96■□□□□ 0.63
TSPAN3-207ENST00000559494 FCRL1Q96LA6 429 aa18.96■□□□□ 0.63
TSPAN3-207ENST00000559494 MMP25Q9NPA2 562 aa18.96■□□□□ 0.63
TSPAN3-207ENST00000559494 C5AR2Q9P296 337 aa18.96■□□□□ 0.63
TSPAN3-207ENST00000559494 GIMAP2Q9UG22 337 aa18.96■□□□□ 0.63
TSPAN3-207ENST00000559494 BSNQ9UPA5 3926 aa18.96■□□□□ 0.62
TSPAN3-207ENST00000559494 ATP6AP2A0A1C7CYW4 349 aa18.95■□□□□ 0.62
TSPAN3-207ENST00000559494 SYNDIG1LA6NDD5 238 aa18.95■□□□□ 0.62
TSPAN3-207ENST00000559494 ATP6AP2O75787 350 aa18.95■□□□□ 0.62
TSPAN3-207ENST00000559494 STT3AP46977 705 aa18.95■□□□□ 0.62
TSPAN3-207ENST00000559494 GPR143P51810 404 aa18.95■□□□□ 0.62
TSPAN3-207ENST00000559494 JMJD6Q6NYC1 403 aaPredicted RBP18.95■□□□□ 0.62
TSPAN3-207ENST00000559494 SLC48A1Q6P1K1 146 aa18.95■□□□□ 0.62
TSPAN3-207ENST00000559494 SIRT6Q8N6T7 355 aa18.95■□□□□ 0.62
TSPAN3-207ENST00000559494 OR4K14Q8NGD5 310 aa18.95■□□□□ 0.62
TSPAN3-207ENST00000559494 ELP5Q8TE02 316 aa18.95■□□□□ 0.62
TSPAN3-207ENST00000559494 FAIM2Q9BWQ8 316 aa18.95■□□□□ 0.62
TSPAN3-207ENST00000559494 ZBTB20Q9HC78 741 aaPredicted RBP18.95■□□□□ 0.62
TSPAN3-207ENST00000559494 PPIEQ9UNP9 301 aaKnown RBP18.95■□□□□ 0.62
TSPAN3-207ENST00000559494 KLF11O14901 512 aa18.94■□□□□ 0.62
TSPAN3-207ENST00000559494 PEX11AO75192 247 aa18.94■□□□□ 0.62
TSPAN3-207ENST00000559494 DRD2P14416 443 aa18.94■□□□□ 0.62
TSPAN3-207ENST00000559494 ALOX15P16050 662 aaPredicted RBP18.94■□□□□ 0.62
TSPAN3-207ENST00000559494 TNNI3P19429 210 aa18.94■□□□□ 0.62
TSPAN3-207ENST00000559494 TACR1P25103 407 aa18.94■□□□□ 0.62
TSPAN3-207ENST00000559494 PIK3R1P27986 724 aa18.94■□□□□ 0.62
TSPAN3-207ENST00000559494 XKP51811 444 aa18.94■□□□□ 0.62
TSPAN3-207ENST00000559494 PGDP52209 483 aa18.94■□□□□ 0.62
TSPAN3-207ENST00000559494 OCRLQ01968 901 aa18.94■□□□□ 0.62
TSPAN3-207ENST00000559494 ZNF763Q0D2J5 394 aa18.94■□□□□ 0.62
TSPAN3-207ENST00000559494 TERF2Q15554 542 aa18.94■□□□□ 0.62
TSPAN3-207ENST00000559494 PDCD2Q16342 344 aaPredicted RBP18.94■□□□□ 0.62
TSPAN3-207ENST00000559494 ZNF750Q32MQ0 723 aa18.94■□□□□ 0.62
TSPAN3-207ENST00000559494 GALNTL6Q49A17 601 aa18.94■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms