RNA–Protein interactions for RNA: ENST00000559339.1

SNX1-205, Transcript of sorting nexin 1, humanhuman

TSL 1 (best)

Gene SNX1, Length 101 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-205ENST00000559339 CD96P40200 585 aa4.08□□□□□ -1.76
SNX1-205ENST00000559339 GSTM5P46439 218 aa4.08□□□□□ -1.76
SNX1-205ENST00000559339 STT3AP46977 705 aa4.08□□□□□ -1.76
SNX1-205ENST00000559339 SSR4P51571 173 aa4.08□□□□□ -1.76
SNX1-205ENST00000559339 NAGLUP54802 743 aa4.08□□□□□ -1.76
SNX1-205ENST00000559339 CASP6P55212 293 aa4.08□□□□□ -1.76
SNX1-205ENST00000559339 DNAJB13P59910 316 aa4.08□□□□□ -1.76
SNX1-205ENST00000559339 TRA2BP62995 288 aaKnown RBP4.08□□□□□ -1.76
SNX1-205ENST00000559339 TNFRSF17Q02223 184 aa4.08□□□□□ -1.76
SNX1-205ENST00000559339 FOLH1Q04609 750 aa4.08□□□□□ -1.76
SNX1-205ENST00000559339 RBPJQ06330 500 aa4.08□□□□□ -1.76
SNX1-205ENST00000559339 ACSM2AQ08AH3 577 aa4.08□□□□□ -1.76
SNX1-205ENST00000559339 CSTF3Q12996 717 aaKnown RBP4.08□□□□□ -1.76
SNX1-205ENST00000559339 TRAF3Q13114 568 aa4.08□□□□□ -1.76
SNX1-205ENST00000559339 TUBA3CQ13748 450 aa4.08□□□□□ -1.76
SNX1-205ENST00000559339 UBAP2LQ14157 1087 aaKnown RBP4.08□□□□□ -1.76
SNX1-205ENST00000559339 HEPACAMQ14CZ8 416 aa4.08□□□□□ -1.76
SNX1-205ENST00000559339 OR1C1Q15619 314 aa4.08□□□□□ -1.76
SNX1-205ENST00000559339 ERCC6LQ2NKX8 1250 aa4.08□□□□□ -1.76
SNX1-205ENST00000559339 ZNF800Q2TB10 664 aaPredicted RBP eCLIP4.08□□□□□ -1.76
SNX1-205ENST00000559339 UNC50Q53HI1 259 aa4.08□□□□□ -1.76
SNX1-205ENST00000559339 PRR30Q53SZ7 412 aaPredicted RBP4.08□□□□□ -1.76
SNX1-205ENST00000559339 SPIN4Q56A73 249 aa4.08□□□□□ -1.76
SNX1-205ENST00000559339 ZNF766Q5HY98 468 aa4.08□□□□□ -1.76
SNX1-205ENST00000559339 SPDYAQ5MJ70 313 aa4.08□□□□□ -1.76
SNX1-205ENST00000559339 NDUFAF5Q5TEU4 345 aa4.08□□□□□ -1.76
SNX1-205ENST00000559339 LIPMQ5VYY2 423 aa4.08□□□□□ -1.76
SNX1-205ENST00000559339 ACSM2BQ68CK6 577 aa4.08□□□□□ -1.76
SNX1-205ENST00000559339 C18orf63Q68DL7 685 aa4.08□□□□□ -1.76
SNX1-205ENST00000559339 FCRLBQ6BAA4 426 aa4.08□□□□□ -1.76
SNX1-205ENST00000559339 SPINK14Q6IE38 97 aa4.08□□□□□ -1.76
SNX1-205ENST00000559339 OR52E8Q6IFG1 317 aa4.08□□□□□ -1.76
SNX1-205ENST00000559339 LETMD1Q6P1Q0 360 aa4.08□□□□□ -1.76
SNX1-205ENST00000559339 TUBA3EQ6PEY2 450 aa4.08□□□□□ -1.76
SNX1-205ENST00000559339 ZNF793Q6ZN11 406 aa4.08□□□□□ -1.76
SNX1-205ENST00000559339 COMMD6Q7Z4G1 85 aa4.08□□□□□ -1.76
SNX1-205ENST00000559339 CROCCP2Q86T23 111 aa4.08□□□□□ -1.76
SNX1-205ENST00000559339 MYO18BQ8IUG5 2567 aa4.08□□□□□ -1.76
SNX1-205ENST00000559339 CRLF3Q8IUI8 442 aa4.08□□□□□ -1.76
SNX1-205ENST00000559339 GPALPP1Q8IXQ4 340 aa4.08□□□□□ -1.76
SNX1-205ENST00000559339 SRRM1Q8IYB3 904 aaKnown RBP4.08□□□□□ -1.76
SNX1-205ENST00000559339 SAMD14Q8IZD0 417 aaPredicted RBP4.08□□□□□ -1.76
SNX1-205ENST00000559339 ST13P4Q8IZP2 240 aaPredicted RBP4.08□□□□□ -1.76
SNX1-205ENST00000559339 SHISA5Q8N114 240 aa4.08□□□□□ -1.76
SNX1-205ENST00000559339 C4orf33Q8N1A6 199 aa4.08□□□□□ -1.76
SNX1-205ENST00000559339 RNF175Q8N4F7 328 aa4.08□□□□□ -1.76
SNX1-205ENST00000559339 APCDD1LQ8NCL9 501 aa4.08□□□□□ -1.76
SNX1-205ENST00000559339 ST6GALNAC3Q8NDV1 305 aa4.08□□□□□ -1.76
SNX1-205ENST00000559339 ANKK1Q8NFD2 765 aa4.08□□□□□ -1.76
SNX1-205ENST00000559339 OR4K14Q8NGD5 310 aa4.08□□□□□ -1.76
SNX1-205ENST00000559339 OR8K3Q8NH51 312 aa4.08□□□□□ -1.76
SNX1-205ENST00000559339 DNAJB8Q8NHS0 232 aa4.08□□□□□ -1.76
SNX1-205ENST00000559339 SLC2A12Q8TD20 617 aa4.08□□□□□ -1.76
SNX1-205ENST00000559339 GRHL3Q8TE85 626 aa4.08□□□□□ -1.76
SNX1-205ENST00000559339 THAP3Q8WTV1 239 aaPredicted RBP4.08□□□□□ -1.76
SNX1-205ENST00000559339 PTPMT1Q8WUK0 201 aaPredicted RBP4.08□□□□□ -1.76
SNX1-205ENST00000559339 ASB15Q8WXK1 588 aa4.08□□□□□ -1.76
SNX1-205ENST00000559339 RIT1Q92963 219 aa4.08□□□□□ -1.76
SNX1-205ENST00000559339 CAVIN3Q969G5 261 aa4.08□□□□□ -1.76
SNX1-205ENST00000559339 NCLNQ969V3 563 aa4.08□□□□□ -1.76
SNX1-205ENST00000559339 C19orf60Q96EN9 201 aa4.08□□□□□ -1.76
SNX1-205ENST00000559339 SENP5Q96HI0 755 aaPredicted RBP4.08□□□□□ -1.76
SNX1-205ENST00000559339 TMEM237Q96Q45 408 aa4.08□□□□□ -1.76
SNX1-205ENST00000559339 CSF3RQ99062 836 aa4.08□□□□□ -1.76
SNX1-205ENST00000559339 BARD1Q99728 777 aaKnown RBP4.08□□□□□ -1.76
SNX1-205ENST00000559339 TRMOQ9BU70 441 aa4.08□□□□□ -1.76
SNX1-205ENST00000559339 CNPPD1Q9BV87 410 aa4.08□□□□□ -1.76
SNX1-205ENST00000559339 MRPL1Q9BYD6 325 aaKnown RBP4.08□□□□□ -1.76
SNX1-205ENST00000559339 PARD6BQ9BYG5 372 aa4.08□□□□□ -1.76
SNX1-205ENST00000559339 OR8D2Q9GZM6 311 aa4.08□□□□□ -1.76
SNX1-205ENST00000559339 AICDAQ9GZX7 198 aa4.08□□□□□ -1.76
SNX1-205ENST00000559339 EML4Q9HC35 981 aaKnown RBP4.08□□□□□ -1.76
SNX1-205ENST00000559339 ZBTB26Q9HCK0 441 aa4.08□□□□□ -1.76
SNX1-205ENST00000559339 MID1IP1Q9NPA3 183 aa4.08□□□□□ -1.76
SNX1-205ENST00000559339 RRAGDQ9NQL2 400 aaPredicted RBP4.08□□□□□ -1.76
SNX1-205ENST00000559339 KLHL1Q9NR64 748 aa4.08□□□□□ -1.76
SNX1-205ENST00000559339 HPF1Q9NWY4 346 aa4.08□□□□□ -1.76
SNX1-205ENST00000559339 SENP1Q9P0U3 644 aa4.08□□□□□ -1.76
SNX1-205ENST00000559339 MYOTQ9UBF9 498 aa4.08□□□□□ -1.76
SNX1-205ENST00000559339 MED13Q9UHV7 2174 aa4.08□□□□□ -1.76
SNX1-205ENST00000559339 ERVK-11Q9UQG0 969 aa4.08□□□□□ -1.76
SNX1-205ENST00000559339 CSAG2Q9Y5P2 127 aa4.08□□□□□ -1.76
SNX1-205ENST00000559339 ZNF780BQ9Y6R6 833 aa4.08□□□□□ -1.76
SNX1-205ENST00000559339 GCN1Q92616 2671 aaKnown RBP4.07□□□□□ -1.76
SNX1-205ENST00000559339 A0A1W2PR48 441 aa4.07□□□□□ -1.76
SNX1-205ENST00000559339 OR6C76A6NM76 312 aa4.07□□□□□ -1.76
SNX1-205ENST00000559339 CAPN14A8MX76 684 aa4.07□□□□□ -1.76
SNX1-205ENST00000559339 G3V2L1 256 aa4.07□□□□□ -1.76
SNX1-205ENST00000559339 ACOT7O00154 380 aa4.07□□□□□ -1.76
SNX1-205ENST00000559339 MANBAO00462 879 aa4.07□□□□□ -1.76
SNX1-205ENST00000559339 PPP6CO00743 305 aa4.07□□□□□ -1.76
SNX1-205ENST00000559339 RGS16O15492 202 aaPredicted RBP4.07□□□□□ -1.76
SNX1-205ENST00000559339 PLIN3O60664 434 aa4.07□□□□□ -1.76
SNX1-205ENST00000559339 TRIM13O60858 407 aa4.07□□□□□ -1.76
SNX1-205ENST00000559339 ERLIN1O75477 346 aa4.07□□□□□ -1.76
SNX1-205ENST00000559339 EEDO75530 441 aaKnown RBP4.07□□□□□ -1.76
SNX1-205ENST00000559339 OR2J2O76002 312 aa4.07□□□□□ -1.76
SNX1-205ENST00000559339 CBX6O95503 412 aa4.07□□□□□ -1.76
SNX1-205ENST00000559339 ETHE1O95571 254 aa4.07□□□□□ -1.76
SNX1-205ENST00000559339 AIFM1O95831 613 aa4.07□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms