RNA–Protein interactions for RNA: ENST00000559061.5

SNX1-204, Transcript of sorting nexin 1, humanhuman

TSL 5

Gene SNX1, Length 550 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-204ENST00000559061 FER1L6-AS2Q96M78 137 aa10.69□□□□□ -0.7
SNX1-204ENST00000559061 ZNF681Q96N22 645 aa10.69□□□□□ -0.7
SNX1-204ENST00000559061 SMAD5Q99717 465 aaKnown RBP10.69□□□□□ -0.7
SNX1-204ENST00000559061 CENPKQ9BS16 269 aa10.69□□□□□ -0.7
SNX1-204ENST00000559061 ADNPQ9H2P0 1102 aa10.69□□□□□ -0.7
SNX1-204ENST00000559061 VTI1BQ9UEU0 232 aa10.69□□□□□ -0.7
SNX1-204ENST00000559061 RAP2CQ9Y3L5 183 aa10.69□□□□□ -0.7
SNX1-204ENST00000559061 PCDHGA9Q9Y5G4 932 aaKnown RBP10.69□□□□□ -0.7
SNX1-204ENST00000559061 CSAG2Q9Y5P2 127 aa10.69□□□□□ -0.7
SNX1-204ENST00000559061 TLN1Q9Y490 2541 aaKnown RBP10.69□□□□□ -0.7
SNX1-204ENST00000559061 ATP6AP2A0A1C7CYW4 349 aa10.68□□□□□ -0.7
SNX1-204ENST00000559061 TMEM200CA6NKL6 621 aa10.68□□□□□ -0.7
SNX1-204ENST00000559061 SLC28A1O00337 649 aa10.68□□□□□ -0.7
SNX1-204ENST00000559061 KLF11O14901 512 aa10.68□□□□□ -0.7
SNX1-204ENST00000559061 PCDH17O14917 1159 aa10.68□□□□□ -0.7
SNX1-204ENST00000559061 CRCPO75575 148 aa10.68□□□□□ -0.7
SNX1-204ENST00000559061 ATP6AP2O75787 350 aa10.68□□□□□ -0.7
SNX1-204ENST00000559061 SERPINA7P05543 415 aa10.68□□□□□ -0.7
SNX1-204ENST00000559061 CT62P0C5K7 136 aa10.68□□□□□ -0.7
SNX1-204ENST00000559061 SDC1P18827 310 aa10.68□□□□□ -0.7
SNX1-204ENST00000559061 RRADP55042 308 aa10.68□□□□□ -0.7
SNX1-204ENST00000559061 TAS2R50P59544 299 aa10.68□□□□□ -0.7
SNX1-204ENST00000559061 PPP2R2AP63151 447 aa10.68□□□□□ -0.7
SNX1-204ENST00000559061 ACSM2AQ08AH3 577 aa10.68□□□□□ -0.7
SNX1-204ENST00000559061 SLC13A2Q13183 592 aa10.68□□□□□ -0.7
SNX1-204ENST00000559061 MYBPC3Q14896 1274 aa10.68□□□□□ -0.7
SNX1-204ENST00000559061 PDCD2Q16342 344 aaPredicted RBP10.68□□□□□ -0.7
SNX1-204ENST00000559061 MPEG1Q2M385 716 aa10.68□□□□□ -0.7
SNX1-204ENST00000559061 COLEC12Q5KU26 742 aa10.68□□□□□ -0.7
SNX1-204ENST00000559061 ACSM2BQ68CK6 577 aa10.68□□□□□ -0.7
SNX1-204ENST00000559061 FAM71E1Q6IPT2 247 aa10.68□□□□□ -0.7
SNX1-204ENST00000559061 NOXRED1Q6NXP6 359 aa10.68□□□□□ -0.7
SNX1-204ENST00000559061 H3F3CQ6NXT2 135 aa10.68□□□□□ -0.7
SNX1-204ENST00000559061 SLC48A1Q6P1K1 146 aa10.68□□□□□ -0.7
SNX1-204ENST00000559061 ELP5Q8TE02 316 aa10.68□□□□□ -0.7
SNX1-204ENST00000559061 METTL21AQ8WXB1 218 aa10.68□□□□□ -0.7
SNX1-204ENST00000559061 ZNF75CPQ92670 426 aaPredicted RBP10.68□□□□□ -0.7
SNX1-204ENST00000559061 PPWD1Q96BP3 646 aaKnown RBP10.68□□□□□ -0.7
SNX1-204ENST00000559061 CNRIP1Q96F85 164 aaPredicted RBP10.68□□□□□ -0.7
SNX1-204ENST00000559061 THOC3Q96J01 351 aaKnown RBP10.68□□□□□ -0.7
SNX1-204ENST00000559061 TUBB6Q9BUF5 446 aa10.68□□□□□ -0.7
SNX1-204ENST00000559061 ALOXE3Q9BYJ1 711 aa10.68□□□□□ -0.7
SNX1-204ENST00000559061 LRTM1Q9HBL6 345 aa10.68□□□□□ -0.7
SNX1-204ENST00000559061 EML4Q9HC35 981 aaKnown RBP10.68□□□□□ -0.7
SNX1-204ENST00000559061 SLCO1B3Q9NPD5 702 aa10.68□□□□□ -0.7
SNX1-204ENST00000559061 ADAP2Q9NPF8 381 aa10.68□□□□□ -0.7
SNX1-204ENST00000559061 ATP13A2Q9NQ11 1180 aa10.68□□□□□ -0.7
SNX1-204ENST00000559061 RIC8BQ9NVN3 520 aa10.68□□□□□ -0.7
SNX1-204ENST00000559061 C1orf109Q9NX04 203 aa10.68□□□□□ -0.7
SNX1-204ENST00000559061 MS4A12Q9NXJ0 267 aa10.68□□□□□ -0.7
SNX1-204ENST00000559061 GPR83Q9NYM4 423 aa10.68□□□□□ -0.7
SNX1-204ENST00000559061 NKIRAS1Q9NYS0 192 aa10.68□□□□□ -0.7
SNX1-204ENST00000559061 TUBD1Q9UJT1 453 aa10.68□□□□□ -0.7
SNX1-204ENST00000559061 EPB41L3Q9Y2J2 1087 aaPredicted RBP10.68□□□□□ -0.7
SNX1-204ENST00000559061 CFAP46Q8IYW2 2715 aa10.68□□□□□ -0.7
SNX1-204ENST00000559061 CROCCQ5TZA2 2017 aa10.67□□□□□ -0.7
SNX1-204ENST00000559061 SDHDO14521 159 aa10.67□□□□□ -0.7
SNX1-204ENST00000559061 MYO1DO94832 1006 aa10.67□□□□□ -0.7
SNX1-204ENST00000559061 GPR75O95800 540 aa10.67□□□□□ -0.7
SNX1-204ENST00000559061 IGKV3-11P04433 115 aa10.67□□□□□ -0.7
SNX1-204ENST00000559061 ITGA3P26006 1051 aa10.67□□□□□ -0.7
SNX1-204ENST00000559061 STT3AP46977 705 aa10.67□□□□□ -0.7
SNX1-204ENST00000559061 ST13P50502 369 aaKnown RBP10.67□□□□□ -0.7
SNX1-204ENST00000559061 RPL14P50914 215 aaKnown RBP10.67□□□□□ -0.7
SNX1-204ENST00000559061 TRA2BP62995 288 aaKnown RBP10.67□□□□□ -0.7
SNX1-204ENST00000559061 RPL38P63173 70 aaKnown RBP10.67□□□□□ -0.7
SNX1-204ENST00000559061 MGAT2Q10469 447 aa10.67□□□□□ -0.7
SNX1-204ENST00000559061 DUSP8Q13202 625 aa10.67□□□□□ -0.7
SNX1-204ENST00000559061 NR6A1Q15406 480 aa10.67□□□□□ -0.7
SNX1-204ENST00000559061 ZNF385BQ569K4 471 aa10.67□□□□□ -0.7
SNX1-204ENST00000559061 SPDYAQ5MJ70 313 aa10.67□□□□□ -0.7
SNX1-204ENST00000559061 OR52E8Q6IFG1 317 aa10.67□□□□□ -0.7
SNX1-204ENST00000559061 IGFL2Q6UWQ7 119 aa10.67□□□□□ -0.7
SNX1-204ENST00000559061 PAGE2Q7Z2X7 111 aa10.67□□□□□ -0.7
SNX1-204ENST00000559061 DDIASQ8IXT1 998 aa10.67□□□□□ -0.7
SNX1-204ENST00000559061 SIRT6Q8N6T7 355 aa10.67□□□□□ -0.7
SNX1-204ENST00000559061 RBMXL3Q8N7X1 1067 aaKnown RBP10.67□□□□□ -0.7
SNX1-204ENST00000559061 SIMC1Q8NDZ2 872 aa10.67□□□□□ -0.7
SNX1-204ENST00000559061 PPP1R14CQ8TAE6 165 aa10.67□□□□□ -0.7
SNX1-204ENST00000559061 SUN3Q8TAQ9 357 aa10.67□□□□□ -0.7
SNX1-204ENST00000559061 RAB3IL1Q8TBN0 382 aa10.67□□□□□ -0.7
SNX1-204ENST00000559061 ZNF721Q8TF20 911 aa10.67□□□□□ -0.7
SNX1-204ENST00000559061 TANKQ92844 425 aa10.67□□□□□ -0.7
SNX1-204ENST00000559061 C19orf60Q96EN9 201 aa10.67□□□□□ -0.7
SNX1-204ENST00000559061 PPP1R36Q96LQ0 422 aa10.67□□□□□ -0.7
SNX1-204ENST00000559061 SLC25A23Q9BV35 468 aa10.67□□□□□ -0.7
SNX1-204ENST00000559061 LHPPQ9H008 270 aa10.67□□□□□ -0.7
SNX1-204ENST00000559061 MANSC1Q9H8J5 431 aa10.67□□□□□ -0.7
SNX1-204ENST00000559061 PRM3Q9NNZ6 103 aa10.67□□□□□ -0.7
SNX1-204ENST00000559061 MMP25Q9NPA2 562 aa10.67□□□□□ -0.7
SNX1-204ENST00000559061 MYNNQ9NPC7 610 aa10.67□□□□□ -0.7
SNX1-204ENST00000559061 SLAMF7Q9NQ25 335 aa10.67□□□□□ -0.7
SNX1-204ENST00000559061 ZNF71Q9NQZ8 489 aaPredicted RBP10.67□□□□□ -0.7
SNX1-204ENST00000559061 PNO1Q9NRX1 252 aaKnown RBP10.67□□□□□ -0.7
SNX1-204ENST00000559061 AHSPQ9NZD4 102 aa10.67□□□□□ -0.7
SNX1-204ENST00000559061 C19orf25Q9UFG5 118 aaPredicted RBP10.67□□□□□ -0.7
SNX1-204ENST00000559061 EXPH5Q8NEV8 1989 aa10.66□□□□□ -0.7
SNX1-204ENST00000559061 BLACEA4D250 179 aa10.66□□□□□ -0.7
SNX1-204ENST00000559061 CLDN4O14493 209 aa10.66□□□□□ -0.7
SNX1-204ENST00000559061 RGS14O43566 566 aa10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms