RNA–Protein interactions for RNA: ENST00000558602.5

IDH3A-208, Transcript of isocitrate dehydrogenase 3 (NAD(+)) alpha, human

TSL 2

Gene IDH3A, Length 2,217 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
IDH3A-208	ENST00000558602	FAM46D	Q8NEK8	389 aa		4.64	□□□□□ -1.67
IDH3A-208	ENST00000558602	VPS37A	Q8NEZ2	397 aa		4.64	□□□□□ -1.67
IDH3A-208	ENST00000558602	PJA1	Q8NG27	643 aa		4.64	□□□□□ -1.67
IDH3A-208	ENST00000558602	OR2L5	Q8NG80	312 aa		4.64	□□□□□ -1.67
IDH3A-208	ENST00000558602	RSC1A1	Q92681	617 aa		4.64	□□□□□ -1.67
IDH3A-208	ENST00000558602	SLC35B4	Q969S0	331 aa		4.64	□□□□□ -1.67
IDH3A-208	ENST00000558602	NCLN	Q969V3	563 aa		4.64	□□□□□ -1.67
IDH3A-208	ENST00000558602	EXOSC8	Q96B26	276 aa	Known RBP	4.64	□□□□□ -1.67
IDH3A-208	ENST00000558602	CLDN23	Q96B33	292 aa		4.64	□□□□□ -1.67
IDH3A-208	ENST00000558602	TM4SF19	Q96DZ7	209 aa		4.64	□□□□□ -1.67
IDH3A-208	ENST00000558602	MTERF3	Q96E29	417 aa		4.64	□□□□□ -1.67
IDH3A-208	ENST00000558602	CENPN	Q96H22	339 aa	Predicted RBP	4.64	□□□□□ -1.67
IDH3A-208	ENST00000558602	HSPA12B	Q96MM6	686 aa		4.64	□□□□□ -1.67
IDH3A-208	ENST00000558602	NECAB3	Q96P71	396 aa	Predicted RBP	4.64	□□□□□ -1.67
IDH3A-208	ENST00000558602	BTBD9	Q96Q07	612 aa		4.64	□□□□□ -1.67
IDH3A-208	ENST00000558602	SLC35A5	Q9BS91	424 aa		4.64	□□□□□ -1.67
IDH3A-208	ENST00000558602	GSDMC	Q9BYG8	508 aa		4.64	□□□□□ -1.67
IDH3A-208	ENST00000558602	MIR1-1HG	Q9H1L0	117 aa		4.64	□□□□□ -1.67
IDH3A-208	ENST00000558602	VCX3B	Q9H321	246 aa		4.64	□□□□□ -1.67
IDH3A-208	ENST00000558602	TM9SF3	Q9HD45	589 aa		4.64	□□□□□ -1.67
IDH3A-208	ENST00000558602	MIEF1	Q9NQG6	463 aa		4.64	□□□□□ -1.67
IDH3A-208	ENST00000558602	C1GALT1	Q9NS00	363 aa		4.64	□□□□□ -1.67
IDH3A-208	ENST00000558602	SIRT3	Q9NTG7	399 aa	Predicted RBP	4.64	□□□□□ -1.67
IDH3A-208	ENST00000558602	VNN3	Q9NY84	501 aa		4.64	□□□□□ -1.67
IDH3A-208	ENST00000558602	PILRA	Q9UKJ1	303 aa		4.64	□□□□□ -1.67
IDH3A-208	ENST00000558602	CNOT11	Q9UKZ1	510 aa	Known RBP	4.64	□□□□□ -1.67
IDH3A-208	ENST00000558602	SNX7	Q9UNH6	387 aa		4.64	□□□□□ -1.67
IDH3A-208	ENST00000558602	MAPRE3	Q9UPY8	281 aa		4.64	□□□□□ -1.67
IDH3A-208	ENST00000558602	MRPS17	Q9Y2R5	130 aa	Known RBP	4.64	□□□□□ -1.67
IDH3A-208	ENST00000558602	MRPS2	Q9Y399	296 aa	Known RBP	4.64	□□□□□ -1.67
IDH3A-208	ENST00000558602		A0A1B0GTW7	788 aa		4.63	□□□□□ -1.67
IDH3A-208	ENST00000558602	MYOCOS	A0A1B0GUC4	107 aa		4.63	□□□□□ -1.67
IDH3A-208	ENST00000558602	GSAP	A4D1B5	854 aa		4.63	□□□□□ -1.67
IDH3A-208	ENST00000558602	FAM86C2P	A6NEL3	165 aa		4.63	□□□□□ -1.67
IDH3A-208	ENST00000558602		B4DGG1	531 aa		4.63	□□□□□ -1.67
IDH3A-208	ENST00000558602	EI24	O14681	340 aa		4.63	□□□□□ -1.67
IDH3A-208	ENST00000558602	CASC3	O15234	703 aa	Known RBP	4.63	□□□□□ -1.67
IDH3A-208	ENST00000558602	CLOCK	O15516	846 aa		4.63	□□□□□ -1.67
IDH3A-208	ENST00000558602	ZW10	O43264	779 aa		4.63	□□□□□ -1.67
IDH3A-208	ENST00000558602	DENR	O43583	198 aa	Known RBP	4.63	□□□□□ -1.67
IDH3A-208	ENST00000558602	TBX19	O60806	448 aa		4.63	□□□□□ -1.67
IDH3A-208	ENST00000558602	NDUFS2	O75306	463 aa		4.63	□□□□□ -1.67
IDH3A-208	ENST00000558602	CSF2	P04141	144 aa		4.63	□□□□□ -1.67
IDH3A-208	ENST00000558602	LYN	P07948	512 aa		4.63	□□□□□ -1.67
IDH3A-208	ENST00000558602	SMIM10L1	P0DMW3	83 aa		4.63	□□□□□ -1.67
IDH3A-208	ENST00000558602	RAP2A	P10114	183 aa		4.63	□□□□□ -1.67
IDH3A-208	ENST00000558602	ALPPL2	P10696	532 aa		4.63	□□□□□ -1.67
IDH3A-208	ENST00000558602	TYRP1	P17643	537 aa		4.63	□□□□□ -1.67
IDH3A-208	ENST00000558602	AQP1	P29972	269 aa		4.63	□□□□□ -1.67
IDH3A-208	ENST00000558602	KDELR2	P33947	212 aa		4.63	□□□□□ -1.67
IDH3A-208	ENST00000558602	GRK3	P35626	688 aa		4.63	□□□□□ -1.67
IDH3A-208	ENST00000558602	CRAT	P43155	626 aa		4.63	□□□□□ -1.67
IDH3A-208	ENST00000558602	CSNK1E	P49674	416 aa	Known RBP	4.63	□□□□□ -1.67
IDH3A-208	ENST00000558602	RAB15	P59190	212 aa		4.63	□□□□□ -1.67
IDH3A-208	ENST00000558602	RPS26	P62854	115 aa	Known RBP	4.63	□□□□□ -1.67
IDH3A-208	ENST00000558602	RPL6	Q02878	288 aa	Known RBP	4.63	□□□□□ -1.67
IDH3A-208	ENST00000558602	HHEX	Q03014	270 aa		4.63	□□□□□ -1.67
IDH3A-208	ENST00000558602	EEF1A2	Q05639	463 aa	Known RBP	4.63	□□□□□ -1.67
IDH3A-208	ENST00000558602	CHRNB3	Q05901	458 aa		4.63	□□□□□ -1.67
IDH3A-208	ENST00000558602	MED21	Q13503	144 aa		4.63	□□□□□ -1.67
IDH3A-208	ENST00000558602	IQCC	Q4KMZ1	466 aa		4.63	□□□□□ -1.67
IDH3A-208	ENST00000558602	FAM98B	Q52LJ0	330 aa	Known RBP	4.63	□□□□□ -1.67
IDH3A-208	ENST00000558602	NHSL2	Q5HYW2	709 aa		4.63	□□□□□ -1.67
IDH3A-208	ENST00000558602	INTS11	Q5TA45	600 aa	Known RBP	4.63	□□□□□ -1.67
IDH3A-208	ENST00000558602	TSSK4	Q6SA08	328 aa		4.63	□□□□□ -1.67
IDH3A-208	ENST00000558602	UGT2A3	Q6UWM9	527 aa		4.63	□□□□□ -1.67
IDH3A-208	ENST00000558602	CCDC81	Q6ZN84	652 aa		4.63	□□□□□ -1.67
IDH3A-208	ENST00000558602	TMEM26	Q6ZUK4	368 aa		4.63	□□□□□ -1.67
IDH3A-208	ENST00000558602	PRSS41	Q7RTY9	318 aa		4.63	□□□□□ -1.67
IDH3A-208	ENST00000558602	PAGE2	Q7Z2X7	111 aa		4.63	□□□□□ -1.67
IDH3A-208	ENST00000558602	SPRED1	Q7Z699	444 aa		4.63	□□□□□ -1.67
IDH3A-208	ENST00000558602	TSEN54	Q7Z6J9	526 aa	Known RBP	4.63	□□□□□ -1.67
IDH3A-208	ENST00000558602	VTCN1	Q7Z7D3	282 aa		4.63	□□□□□ -1.67
IDH3A-208	ENST00000558602	RNF130	Q86XS8	419 aa		4.63	□□□□□ -1.67
IDH3A-208	ENST00000558602	TRIM48	Q8IWZ4	208 aa		4.63	□□□□□ -1.67
IDH3A-208	ENST00000558602	MFSD2A	Q8NA29	543 aa		4.63	□□□□□ -1.67
IDH3A-208	ENST00000558602	CATSPER1	Q8NEC5	780 aa		4.63	□□□□□ -1.67
IDH3A-208	ENST00000558602	TTL	Q8NG68	377 aa		4.63	□□□□□ -1.67
IDH3A-208	ENST00000558602	ZDHHC1	Q8WTX9	485 aa		4.63	□□□□□ -1.67
IDH3A-208	ENST00000558602	KLHL6	Q8WZ60	621 aa		4.63	□□□□□ -1.67
IDH3A-208	ENST00000558602	TMBIM1	Q969X1	311 aa		4.63	□□□□□ -1.67
IDH3A-208	ENST00000558602	CNRIP1	Q96F85	164 aa	Predicted RBP	4.63	□□□□□ -1.67
IDH3A-208	ENST00000558602	SLC47A1	Q96FL8	570 aa		4.63	□□□□□ -1.67
IDH3A-208	ENST00000558602	SMIM10	Q96HG1	83 aa		4.63	□□□□□ -1.67
IDH3A-208	ENST00000558602	PYURF	Q96I23	114 aa		4.63	□□□□□ -1.67
IDH3A-208	ENST00000558602	SHD	Q96IW2	340 aa		4.63	□□□□□ -1.67
IDH3A-208	ENST00000558602	VPS50	Q96JG6	964 aa		4.63	□□□□□ -1.67
IDH3A-208	ENST00000558602	QRFPR	Q96P65	431 aa		4.63	□□□□□ -1.67
IDH3A-208	ENST00000558602	NELL2	Q99435	816 aa		4.63	□□□□□ -1.67
IDH3A-208	ENST00000558602	MAPKAP1	Q9BPZ7	522 aa		4.63	□□□□□ -1.67
IDH3A-208	ENST00000558602	SOX17	Q9H6I2	414 aa	Predicted RBP	4.63	□□□□□ -1.67
IDH3A-208	ENST00000558602	FAM60A	Q9NP50	221 aa		4.63	□□□□□ -1.67
IDH3A-208	ENST00000558602	POT1	Q9NUX5	634 aa		4.63	□□□□□ -1.67
IDH3A-208	ENST00000558602	ATAD3A	Q9NVI7	634 aa		4.63	□□□□□ -1.67
IDH3A-208	ENST00000558602	HRASLS2	Q9NWW9	162 aa		4.63	□□□□□ -1.67
IDH3A-208	ENST00000558602	UCKL1	Q9NWZ5	548 aa		4.63	□□□□□ -1.67
IDH3A-208	ENST00000558602	ZNF282	Q9UDV7	671 aa	Predicted RBP	4.63	□□□□□ -1.67
IDH3A-208	ENST00000558602	ZNF639	Q9UID6	485 aa		4.63	□□□□□ -1.67
IDH3A-208	ENST00000558602	MUTYH	Q9UIF7	546 aa		4.63	□□□□□ -1.67
IDH3A-208	ENST00000558602	ADAM29	Q9UKF5	820 aa		4.63	□□□□□ -1.67

Retrieved 100 of 20,778 RNA–protein pairs in 23 ms