RNA–Protein interactions for RNA: ENST00000558373.5

CTDSPL2-202, Transcript of CTD small phosphatase like 2, humanhuman

TSL 1 (best) BASIC

Gene CTDSPL2, Length 4,255 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-202ENST00000558373 PTPN6P29350 595 aa1.21□□□□□ -2.22
CTDSPL2-202ENST00000558373 MDH1P40925 334 aaKnown RBP1.21□□□□□ -2.22
CTDSPL2-202ENST00000558373 PRKCIP41743 596 aa1.21□□□□□ -2.22
CTDSPL2-202ENST00000558373 ACADSBP45954 432 aa1.21□□□□□ -2.22
CTDSPL2-202ENST00000558373 NDST1P52848 882 aa1.21□□□□□ -2.22
CTDSPL2-202ENST00000558373 METAP1P53582 386 aa1.21□□□□□ -2.22
CTDSPL2-202ENST00000558373 PROK1P58294 105 aa1.21□□□□□ -2.22
CTDSPL2-202ENST00000558373 KIF5AQ12840 1032 aa1.21□□□□□ -2.22
CTDSPL2-202ENST00000558373 PDK3Q15120 406 aa1.21□□□□□ -2.22
CTDSPL2-202ENST00000558373 ACSF3Q4G176 576 aaPredicted RBP1.21□□□□□ -2.22
CTDSPL2-202ENST00000558373 TMEM41BQ5BJD5 291 aa1.21□□□□□ -2.22
CTDSPL2-202ENST00000558373 ZNF542PQ5EBM4 170 aa1.21□□□□□ -2.22
CTDSPL2-202ENST00000558373 ATP1A1-AS1Q5TC04 95 aa1.21□□□□□ -2.22
CTDSPL2-202ENST00000558373 PRAMEF8Q5VWM4 474 aa1.21□□□□□ -2.22
CTDSPL2-202ENST00000558373 TMEM225Q6GV28 225 aa1.21□□□□□ -2.22
CTDSPL2-202ENST00000558373 ZNF425Q6IV72 752 aa1.21□□□□□ -2.22
CTDSPL2-202ENST00000558373 KLHL10Q6JEL2 608 aa1.21□□□□□ -2.22
CTDSPL2-202ENST00000558373 TRMT11Q7Z4G4 463 aaKnown RBP1.21□□□□□ -2.22
CTDSPL2-202ENST00000558373 ARHGAP22Q7Z5H3 698 aa1.21□□□□□ -2.22
CTDSPL2-202ENST00000558373 DCUN1D3Q8IWE4 304 aa1.21□□□□□ -2.22
CTDSPL2-202ENST00000558373 RAB42Q8N4Z0 105 aa1.21□□□□□ -2.22
CTDSPL2-202ENST00000558373 NECAB1Q8N987 351 aa1.21□□□□□ -2.22
CTDSPL2-202ENST00000558373 SLC37A3Q8NCC5 494 aa1.21□□□□□ -2.22
CTDSPL2-202ENST00000558373 TMEM185AQ8NFB2 350 aa1.21□□□□□ -2.22
CTDSPL2-202ENST00000558373 OR5M9Q8NGP3 310 aa1.21□□□□□ -2.22
CTDSPL2-202ENST00000558373 ST7LQ8TDW4 575 aa1.21□□□□□ -2.22
CTDSPL2-202ENST00000558373 ZNF274Q96GC6 653 aaPredicted RBP1.21□□□□□ -2.22
CTDSPL2-202ENST00000558373 ZNF583Q96ND8 569 aa1.21□□□□□ -2.22
CTDSPL2-202ENST00000558373 CBWD1Q9BRT8 395 aa1.21□□□□□ -2.22
CTDSPL2-202ENST00000558373 RHNO1Q9BSD3 238 aa1.21□□□□□ -2.22
CTDSPL2-202ENST00000558373 TRMT61BQ9BVS5 477 aaKnown RBP1.21□□□□□ -2.22
CTDSPL2-202ENST00000558373 WDR76Q9H967 626 aa1.21□□□□□ -2.22
CTDSPL2-202ENST00000558373 KCNK13Q9HB14 408 aa1.21□□□□□ -2.22
CTDSPL2-202ENST00000558373 Q9N2K0 584 aa1.21□□□□□ -2.22
CTDSPL2-202ENST00000558373 DNAJC4Q9NNZ3 241 aa1.21□□□□□ -2.22
CTDSPL2-202ENST00000558373 CLIP2Q9UDT6 1046 aa1.21□□□□□ -2.22
CTDSPL2-202ENST00000558373 MRTO4Q9UKD2 239 aaKnown RBP1.21□□□□□ -2.22
CTDSPL2-202ENST00000558373 DHRS7Q9Y394 339 aa1.21□□□□□ -2.22
CTDSPL2-202ENST00000558373 C2CD2Q9Y426 696 aa1.21□□□□□ -2.22
CTDSPL2-202ENST00000558373 ARHGAP31Q2M1Z3 1444 aa1.21□□□□□ -2.22
CTDSPL2-202ENST00000558373 A0A1W2PPC1 479 aa1.21□□□□□ -2.22
CTDSPL2-202ENST00000558373 WASHC1A8K0Z3 465 aa1.21□□□□□ -2.22
CTDSPL2-202ENST00000558373 ZNF587BE7ETH6 402 aa1.21□□□□□ -2.22
CTDSPL2-202ENST00000558373 SDC3O75056 442 aa1.21□□□□□ -2.22
CTDSPL2-202ENST00000558373 LDB3O75112 727 aa1.21□□□□□ -2.22
CTDSPL2-202ENST00000558373 SCGB2A1O75556 95 aa1.21□□□□□ -2.22
CTDSPL2-202ENST00000558373 CLPTM1O96005 669 aa1.21□□□□□ -2.22
CTDSPL2-202ENST00000558373 NR3C1P04150 777 aa1.21□□□□□ -2.22
CTDSPL2-202ENST00000558373 ATP1B1P05026 303 aa1.21□□□□□ -2.22
CTDSPL2-202ENST00000558373 NGFRP08138 427 aa1.21□□□□□ -2.22
CTDSPL2-202ENST00000558373 MYOD1P15172 320 aa1.21□□□□□ -2.22
CTDSPL2-202ENST00000558373 TNFRSF1BP20333 461 aa1.21□□□□□ -2.22
CTDSPL2-202ENST00000558373 C4BPBP20851 252 aa1.21□□□□□ -2.22
CTDSPL2-202ENST00000558373 ACKR3P25106 362 aa1.21□□□□□ -2.22
CTDSPL2-202ENST00000558373 CEACAM8P31997 349 aaPredicted RBP1.21□□□□□ -2.22
CTDSPL2-202ENST00000558373 ARRB2P32121 409 aa1.21□□□□□ -2.22
CTDSPL2-202ENST00000558373 SLC1A6P48664 564 aa1.21□□□□□ -2.22
CTDSPL2-202ENST00000558373 RPL23AP62750 156 aaKnown RBP1.21□□□□□ -2.22
CTDSPL2-202ENST00000558373 GPR50Q13585 617 aa1.21□□□□□ -2.22
CTDSPL2-202ENST00000558373 HNF4GQ14541 408 aa1.21□□□□□ -2.22
CTDSPL2-202ENST00000558373 IZUMO4Q1ZYL8 232 aa1.21□□□□□ -2.22
CTDSPL2-202ENST00000558373 GPAT3Q53EU6 434 aa1.21□□□□□ -2.22
CTDSPL2-202ENST00000558373 MEDAGQ5VYS4 303 aa1.21□□□□□ -2.22
CTDSPL2-202ENST00000558373 LCLAT1Q6UWP7 414 aa1.21□□□□□ -2.22
CTDSPL2-202ENST00000558373 LEKR1Q6ZMV7 388 aa1.21□□□□□ -2.22
CTDSPL2-202ENST00000558373 MARK2Q7KZI7 788 aaKnown RBP1.21□□□□□ -2.22
CTDSPL2-202ENST00000558373 TAS2R42Q7RTR8 314 aa1.21□□□□□ -2.22
CTDSPL2-202ENST00000558373 ANKRD33Q7Z3H0 272 aa1.21□□□□□ -2.22
CTDSPL2-202ENST00000558373 PIWIL4Q7Z3Z4 852 aaKnown RBP1.21□□□□□ -2.22
CTDSPL2-202ENST00000558373 CROCCP3Q8IVE0 287 aa1.21□□□□□ -2.22
CTDSPL2-202ENST00000558373 ZNF595Q8IYB9 648 aa1.21□□□□□ -2.22
CTDSPL2-202ENST00000558373 KIRREL3Q8IZU9 778 aa1.21□□□□□ -2.22
CTDSPL2-202ENST00000558373 OR13J1Q8NGT2 312 aa1.21□□□□□ -2.22
CTDSPL2-202ENST00000558373 DQX1Q8TE96 717 aaKnown RBP1.21□□□□□ -2.22
CTDSPL2-202ENST00000558373 STMN2Q93045 179 aa1.21□□□□□ -2.22
CTDSPL2-202ENST00000558373 GLYATL1Q969I3 302 aa1.21□□□□□ -2.22
CTDSPL2-202ENST00000558373 ST6GALNAC6Q969X2 333 aa1.21□□□□□ -2.22
CTDSPL2-202ENST00000558373 TRIM44Q96DX7 344 aaPredicted RBP1.21□□□□□ -2.22
CTDSPL2-202ENST00000558373 C16orf58Q96GQ5 468 aa1.21□□□□□ -2.22
CTDSPL2-202ENST00000558373 ZNF354BQ96LW1 612 aa1.21□□□□□ -2.22
CTDSPL2-202ENST00000558373 VPS35Q96QK1 796 aa1.21□□□□□ -2.22
CTDSPL2-202ENST00000558373 TAAR6Q96RI8 345 aa1.21□□□□□ -2.22
CTDSPL2-202ENST00000558373 MYCBPQ99417 103 aaPredicted RBP1.21□□□□□ -2.22
CTDSPL2-202ENST00000558373 ZBTB18Q99592 522 aa1.21□□□□□ -2.22
CTDSPL2-202ENST00000558373 OLFM1Q99784 485 aa1.21□□□□□ -2.22
CTDSPL2-202ENST00000558373 OMDQ99983 421 aa1.21□□□□□ -2.22
CTDSPL2-202ENST00000558373 PAPOLGQ9BWT3 736 aaKnown RBP1.21□□□□□ -2.22
CTDSPL2-202ENST00000558373 PINK1Q9BXM7 581 aa1.21□□□□□ -2.22
CTDSPL2-202ENST00000558373 CACNG6Q9BXT2 260 aa1.21□□□□□ -2.22
CTDSPL2-202ENST00000558373 DCTPP1Q9H773 170 aa1.21□□□□□ -2.22
CTDSPL2-202ENST00000558373 NANSQ9NR45 359 aa1.21□□□□□ -2.22
CTDSPL2-202ENST00000558373 ATAD3AQ9NVI7 634 aa1.21□□□□□ -2.22
CTDSPL2-202ENST00000558373 DONSONQ9NYP3 566 aa1.21□□□□□ -2.22
CTDSPL2-202ENST00000558373 KLHL8Q9P2G9 620 aaPredicted RBP1.21□□□□□ -2.22
CTDSPL2-202ENST00000558373 XPO7Q9UIA9 1087 aaKnown RBP1.21□□□□□ -2.22
CTDSPL2-202ENST00000558373 SATB2Q9UPW6 733 aa1.21□□□□□ -2.22
CTDSPL2-202ENST00000558373 TNNQ9UQP3 1299 aa1.21□□□□□ -2.22
CTDSPL2-202ENST00000558373 SH3GLB1Q9Y371 365 aa1.21□□□□□ -2.22
CTDSPL2-202ENST00000558373 TNFRSF18Q9Y5U5 241 aa1.21□□□□□ -2.22
CTDSPL2-202ENST00000558373 R4GN57 208 aa1.21□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms