RNA–Protein interactions for RNA: ENST00000558319.5

SPG11-210, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SPG11, Length 6,426 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-210ENST00000558319 TSPAN15O95858 294 aa13.42□□□□□ -0.26
SPG11-210ENST00000558319 HOXA10P31260 410 aaPredicted RBP13.42□□□□□ -0.26
SPG11-210ENST00000558319 OTX2P32243 289 aa13.42□□□□□ -0.26
SPG11-210ENST00000558319 GMPRP36959 345 aa13.42□□□□□ -0.26
SPG11-210ENST00000558319 FIGNL1Q6PIW4 674 aa13.42□□□□□ -0.26
SPG11-210ENST00000558319 PLEKHG7Q6ZR37 379 aa13.42□□□□□ -0.26
SPG11-210ENST00000558319 hCG_1807616A0A1W2PRN6 198 aa13.41□□□□□ -0.26
SPG11-210ENST00000558319 PI15O43692 258 aa13.41□□□□□ -0.26
SPG11-210ENST00000558319 HOXC6P09630 235 aa13.41□□□□□ -0.26
SPG11-210ENST00000558319 ETV3P41162 512 aa13.41□□□□□ -0.26
SPG11-210ENST00000558319 LEPRP48357 1165 aaKnown RBP13.41□□□□□ -0.26
SPG11-210ENST00000558319 KIAA0930Q6ICG6 404 aaPredicted RBP13.41□□□□□ -0.26
SPG11-210ENST00000558319 GNPDA2Q8TDQ7 276 aa13.41□□□□□ -0.26
SPG11-210ENST00000558319 SLC22A17Q8WUG5 538 aa13.41□□□□□ -0.26
SPG11-210ENST00000558319 ZNF223Q9UK11 482 aaPredicted RBP13.41□□□□□ -0.26
SPG11-210ENST00000558319 PCDHGB2Q9Y5G2 931 aa13.41□□□□□ -0.26
SPG11-210ENST00000558319 A0A1W2PP18 115 aa13.41□□□□□ -0.26
SPG11-210ENST00000558319 DUXAA6NLW8 204 aa13.41□□□□□ -0.26
SPG11-210ENST00000558319 IFNA5P01569 189 aa13.41□□□□□ -0.26
SPG11-210ENST00000558319 OPN1LWP04000 364 aa13.41□□□□□ -0.26
SPG11-210ENST00000558319 ATP5A1P25705 553 aaKnown RBP13.41□□□□□ -0.26
SPG11-210ENST00000558319 FASLGP48023 281 aa13.41□□□□□ -0.26
SPG11-210ENST00000558319 NKX6-1P78426 367 aaPredicted RBP13.41□□□□□ -0.26
SPG11-210ENST00000558319 FRG2Q64ET8 278 aa13.41□□□□□ -0.26
SPG11-210ENST00000558319 FRG2BQ96QU4 278 aa13.41□□□□□ -0.26
SPG11-210ENST00000558319 NELL2Q99435 816 aa13.41□□□□□ -0.26
SPG11-210ENST00000558319 HDHD5Q9BXW7 423 aa13.41□□□□□ -0.26
SPG11-210ENST00000558319 SLC32A1Q9H598 525 aa13.41□□□□□ -0.26
SPG11-210ENST00000558319 RBPJLQ9UBG7 517 aa13.41□□□□□ -0.26
SPG11-210ENST00000558319 CSNK2A2P19784 350 aaPredicted RBP13.41□□□□□ -0.26
SPG11-210ENST00000558319 GINS1Q14691 196 aa13.41□□□□□ -0.26
SPG11-210ENST00000558319 DCDC5Q6ZRR9 648 aa13.41□□□□□ -0.26
SPG11-210ENST00000558319 SHISA6Q6ZSJ9 500 aa13.41□□□□□ -0.26
SPG11-210ENST00000558319 OR14K1Q8NGZ2 314 aa13.41□□□□□ -0.26
SPG11-210ENST00000558319 FETUBQ9UGM5 382 aa13.41□□□□□ -0.26
SPG11-210ENST00000558319 PCDHB3Q9Y5E6 796 aa13.41□□□□□ -0.26
SPG11-210ENST00000558319 LEFTY2O00292 366 aa13.41□□□□□ -0.26
SPG11-210ENST00000558319 SLC11A1P49279 550 aa13.41□□□□□ -0.26
SPG11-210ENST00000558319 TMEM225Q6GV28 225 aa13.41□□□□□ -0.26
SPG11-210ENST00000558319 NUDT13Q86X67 352 aa13.41□□□□□ -0.26
SPG11-210ENST00000558319 NIFKQ9BYG3 293 aaKnown RBP13.41□□□□□ -0.26
SPG11-210ENST00000558319 ABCG5Q9H222 651 aa13.41□□□□□ -0.26
SPG11-210ENST00000558319 ZDHHC3Q9NYG2 299 aa13.41□□□□□ -0.26
SPG11-210ENST00000558319 IL20RAQ9UHF4 553 aa13.41□□□□□ -0.26
SPG11-210ENST00000558319 A0A0G2JLL6 359 aaPredicted RBP13.41□□□□□ -0.26
SPG11-210ENST00000558319 CLCA4Q14CN2 919 aa13.41□□□□□ -0.26
SPG11-210ENST00000558319 SMAD2Q15796 467 aaKnown RBP13.41□□□□□ -0.26
SPG11-210ENST00000558319 LY6G5CQ5SRR4 150 aa13.41□□□□□ -0.26
SPG11-210ENST00000558319 PRRT2Q7Z6L0 340 aaPredicted RBP13.41□□□□□ -0.26
SPG11-210ENST00000558319 WDR20Q8TBZ3 569 aa13.41□□□□□ -0.26
SPG11-210ENST00000558319 IL17FQ96PD4 163 aa13.41□□□□□ -0.26
SPG11-210ENST00000558319 LRFN1Q9P244 771 aa13.41□□□□□ -0.26
SPG11-210ENST00000558319 HSD17B2P37059 387 aa13.4□□□□□ -0.26
SPG11-210ENST00000558319 AKR1C8PQ5T2L2 129 aa13.4□□□□□ -0.26
SPG11-210ENST00000558319 ENDOVQ8N8Q3 282 aaKnown RBP13.4□□□□□ -0.26
SPG11-210ENST00000558319 NDNFQ8TB73 568 aa13.4□□□□□ -0.26
SPG11-210ENST00000558319 OSTF1Q92882 214 aa13.4□□□□□ -0.26
SPG11-210ENST00000558319 LRCH3Q96II8 777 aa13.4□□□□□ -0.26
SPG11-210ENST00000558319 FUNDC2Q9BWH2 189 aa13.4□□□□□ -0.26
SPG11-210ENST00000558319 GNG13Q9P2W3 67 aa13.4□□□□□ -0.26
SPG11-210ENST00000558319 MST1RQ04912 1400 aa13.4□□□□□ -0.26
SPG11-210ENST00000558319 UBFD1O14562 309 aaKnown RBP13.4□□□□□ -0.26
SPG11-210ENST00000558319 POLR1CO15160 346 aaPredicted RBP13.4□□□□□ -0.26
SPG11-210ENST00000558319 MT-ND2P03891 347 aa13.4□□□□□ -0.26
SPG11-210ENST00000558319 YBEYP58557 167 aaPredicted RBP13.4□□□□□ -0.26
SPG11-210ENST00000558319 RPS26P62854 115 aaKnown RBP13.4□□□□□ -0.26
SPG11-210ENST00000558319 SPIN4Q56A73 249 aa13.4□□□□□ -0.26
SPG11-210ENST00000558319 TMPRSS12Q86WS5 348 aa13.4□□□□□ -0.26
SPG11-210ENST00000558319 KLBQ86Z14 1044 aa13.4□□□□□ -0.26
SPG11-210ENST00000558319 CPT1CQ8TCG5 803 aa13.4□□□□□ -0.26
SPG11-210ENST00000558319 BRI3BPQ8WY22 251 aa13.4□□□□□ -0.26
SPG11-210ENST00000558319 TFGQ92734 400 aaPredicted RBP13.4□□□□□ -0.26
SPG11-210ENST00000558319 PCBD2Q9H0N5 130 aa13.4□□□□□ -0.26
SPG11-210ENST00000558319 GPATCH2Q9NW75 528 aa13.4□□□□□ -0.26
SPG11-210ENST00000558319 HRASLS2Q9NWW9 162 aa13.4□□□□□ -0.26
SPG11-210ENST00000558319 NLGN3Q9NZ94 848 aa13.4□□□□□ -0.26
SPG11-210ENST00000558319 HCN4Q9Y3Q4 1203 aa13.4□□□□□ -0.26
SPG11-210ENST00000558319 MYH10P35580 1976 aa13.4□□□□□ -0.26
SPG11-210ENST00000558319 FUOMA2VDF0 154 aa13.4□□□□□ -0.26
SPG11-210ENST00000558319 FAM159BA6NKW6 160 aa13.4□□□□□ -0.26
SPG11-210ENST00000558319 MANBAO00462 879 aa13.4□□□□□ -0.26
SPG11-210ENST00000558319 PRICKLE3O43900 615 aaPredicted RBP13.4□□□□□ -0.26
SPG11-210ENST00000558319 GJB5O95377 273 aa13.4□□□□□ -0.26
SPG11-210ENST00000558319 MAS1P04201 325 aa13.4□□□□□ -0.26
SPG11-210ENST00000558319 ADH6P28332 368 aa13.4□□□□□ -0.26
SPG11-210ENST00000558319 CTBP2P56545 445 aa13.4□□□□□ -0.26
SPG11-210ENST00000558319 PMS2P3Q13401 168 aa13.4□□□□□ -0.26
SPG11-210ENST00000558319 IRF5Q13568 498 aa13.4□□□□□ -0.26
SPG11-210ENST00000558319 DEFB110Q30KQ9 67 aa13.4□□□□□ -0.26
SPG11-210ENST00000558319 C6orf141Q5SZD1 244 aa13.4□□□□□ -0.26
SPG11-210ENST00000558319 FAM198BQ6UWH4 519 aa13.4□□□□□ -0.26
SPG11-210ENST00000558319 OSTM1Q86WC4 334 aa13.4□□□□□ -0.26
SPG11-210ENST00000558319 GLIS1Q8NBF1 620 aa13.4□□□□□ -0.26
SPG11-210ENST00000558319 CNTNAP3BQ96NU0 1288 aa13.4□□□□□ -0.26
SPG11-210ENST00000558319 MGAT4BQ9UQ53 548 aa13.4□□□□□ -0.26
SPG11-210ENST00000558319 A6NLC8 198 aa13.4□□□□□ -0.26
SPG11-210ENST00000558319 PLSCR1O15162 318 aa13.4□□□□□ -0.26
SPG11-210ENST00000558319 CREBL2O60519 120 aaPredicted RBP13.4□□□□□ -0.26
SPG11-210ENST00000558319 IFNA17P01571 189 aa13.4□□□□□ -0.26
SPG11-210ENST00000558319 GNB3P16520 340 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms