RNA–Protein interactions for RNA: ENST00000558264.5

TPM1-210, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 2,687 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-210ENST00000558264 RIPOR3Q96MK2 946 aa10.01□□□□□ -0.81
TPM1-210ENST00000558264 RAD21L1Q9H4I0 556 aa10.01□□□□□ -0.81
TPM1-210ENST00000558264 NDRG4Q9ULP0 352 aaKnown RBP10.01□□□□□ -0.81
TPM1-210ENST00000558264 MYO10Q9HD67 2058 aa10.01□□□□□ -0.81
TPM1-210ENST00000558264 A0A1W2PR48 441 aa10.01□□□□□ -0.81
TPM1-210ENST00000558264 GPR89AB7ZAQ6 455 aa10.01□□□□□ -0.81
TPM1-210ENST00000558264 ANHXE9PGG2 379 aa10.01□□□□□ -0.81
TPM1-210ENST00000558264 HMGN4O00479 90 aa10.01□□□□□ -0.81
TPM1-210ENST00000558264 SEC14L2O76054 403 aa10.01□□□□□ -0.81
TPM1-210ENST00000558264 GPR89BP0CG08 455 aa10.01□□□□□ -0.81
TPM1-210ENST00000558264 GSTM2P28161 218 aa10.01□□□□□ -0.81
TPM1-210ENST00000558264 HTR1BP28222 390 aa10.01□□□□□ -0.81
TPM1-210ENST00000558264 GRK3P35626 688 aa10.01□□□□□ -0.81
TPM1-210ENST00000558264 LTBRP36941 435 aa10.01□□□□□ -0.81
TPM1-210ENST00000558264 GP2P55259 537 aaKnown RBP10.01□□□□□ -0.81
TPM1-210ENST00000558264 RBBP4Q09028 425 aa10.01□□□□□ -0.81
TPM1-210ENST00000558264 PUM1Q14671 1186 aaKnown RBP eCLIP10.01□□□□□ -0.815e-9■□□□□ 8.1
TPM1-210ENST00000558264 MAD2L1BPQ15013 274 aaPredicted RBP10.01□□□□□ -0.81
TPM1-210ENST00000558264 NPTX1Q15818 432 aa10.01□□□□□ -0.81
TPM1-210ENST00000558264 GTF2IRD2BQ6EKJ0 949 aa10.01□□□□□ -0.81
TPM1-210ENST00000558264 REEP3Q6NUK4 255 aa10.01□□□□□ -0.81
TPM1-210ENST00000558264 GTF2IRD2Q86UP8 949 aa10.01□□□□□ -0.81
TPM1-210ENST00000558264 ENTHD1Q8IYW4 607 aa10.01□□□□□ -0.81
TPM1-210ENST00000558264 OR10G6Q8NH81 332 aa10.01□□□□□ -0.81
TPM1-210ENST00000558264 FAM81AQ8TBF8 368 aa10.01□□□□□ -0.81
TPM1-210ENST00000558264 HMGB4Q8WW32 186 aa10.01□□□□□ -0.81
TPM1-210ENST00000558264 MS4A6EQ96DS6 147 aa10.01□□□□□ -0.81
TPM1-210ENST00000558264 NEURL3Q96EH8 262 aa10.01□□□□□ -0.81
TPM1-210ENST00000558264 APOL4Q9BPW4 351 aa10.01□□□□□ -0.81
TPM1-210ENST00000558264 FUNDC2Q9BWH2 189 aa10.01□□□□□ -0.81
TPM1-210ENST00000558264 C1QTNF7Q9BXJ2 289 aa10.01□□□□□ -0.81
TPM1-210ENST00000558264 EQTNQ9NQ60 294 aa10.01□□□□□ -0.81
TPM1-210ENST00000558264 CTPS2Q9NRF8 586 aa10.01□□□□□ -0.81
TPM1-210ENST00000558264 ZCCHC3Q9NUD5 404 aaKnown RBP10.01□□□□□ -0.81
TPM1-210ENST00000558264 SELENONQ9NZV5 590 aa10.01□□□□□ -0.81
TPM1-210ENST00000558264 APOBEC3BQ9UH17 382 aaKnown RBP10.01□□□□□ -0.81
TPM1-210ENST00000558264 PCDHGA6Q9Y5G7 932 aa10.01□□□□□ -0.81
TPM1-210ENST00000558264 GMEB1Q9Y692 573 aa10.01□□□□□ -0.81
TPM1-210ENST00000558264 TCRBV21S2A2A0A5A6 115 aa10□□□□□ -0.81
TPM1-210ENST00000558264 PRAMEF27A3QJZ7 478 aa10□□□□□ -0.81
TPM1-210ENST00000558264 ADAMDEC1O15204 470 aa10□□□□□ -0.81
TPM1-210ENST00000558264 SLC28A2O43868 658 aa10□□□□□ -0.81
TPM1-210ENST00000558264 TPST2O60704 377 aa10□□□□□ -0.81
TPM1-210ENST00000558264 NOL3O60936 208 aaKnown RBP10□□□□□ -0.81
TPM1-210ENST00000558264 CLEC3AO75596 197 aa10□□□□□ -0.81
TPM1-210ENST00000558264 MT-ND2P03891 347 aa10□□□□□ -0.81
TPM1-210ENST00000558264 ASGR2P07307 311 aa10□□□□□ -0.81
TPM1-210ENST00000558264 ENTPD1P49961 510 aa10□□□□□ -0.81
TPM1-210ENST00000558264 LIM2P55344 173 aa10□□□□□ -0.81
TPM1-210ENST00000558264 OCA2Q04671 838 aa10□□□□□ -0.81
TPM1-210ENST00000558264 KEAP1Q14145 624 aa10□□□□□ -0.81
TPM1-210ENST00000558264 MAPK11Q15759 364 aa10□□□□□ -0.81
TPM1-210ENST00000558264 LEXMQ3ZCV2 418 aa10□□□□□ -0.81
TPM1-210ENST00000558264 CRB2Q5IJ48 1285 aa10□□□□□ -0.81
TPM1-210ENST00000558264 DEF8Q6ZN54 512 aa10□□□□□ -0.81
TPM1-210ENST00000558264 COMTD1Q86VU5 262 aa10□□□□□ -0.81
TPM1-210ENST00000558264 ACOT4Q8N9L9 421 aa10□□□□□ -0.81
TPM1-210ENST00000558264 SETD9Q8NE22 299 aa10□□□□□ -0.81
TPM1-210ENST00000558264 GPR32P1Q8NGA4 272 aa10□□□□□ -0.81
TPM1-210ENST00000558264 APH1BQ8WW43 257 aa10□□□□□ -0.81
TPM1-210ENST00000558264 GEMIN6Q8WXD5 167 aaKnown RBP10□□□□□ -0.81
TPM1-210ENST00000558264 POP5Q969H6 163 aaKnown RBP10□□□□□ -0.81
TPM1-210ENST00000558264 ZBED6CLQ96FA7 236 aaPredicted RBP10□□□□□ -0.81
TPM1-210ENST00000558264 BMFQ96LC9 184 aa10□□□□□ -0.81
TPM1-210ENST00000558264 COL21A1Q96P44 957 aa10□□□□□ -0.81
TPM1-210ENST00000558264 QRFPRQ96P65 431 aa10□□□□□ -0.81
TPM1-210ENST00000558264 QRSL1Q9H0R6 528 aaKnown RBP10□□□□□ -0.81
TPM1-210ENST00000558264 OR51I1Q9H343 314 aa10□□□□□ -0.81
TPM1-210ENST00000558264 DDX31Q9H8H2 851 aaKnown RBP10□□□□□ -0.81
TPM1-210ENST00000558264 ZNF624Q9P2J8 865 aaPredicted RBP10□□□□□ -0.81
TPM1-210ENST00000558264 ZBTB32Q9Y2Y4 487 aaPredicted RBP10□□□□□ -0.81
TPM1-210ENST00000558264 PRR19A6NJB7 356 aa10□□□□□ -0.81
TPM1-210ENST00000558264 FFAR1O14842 300 aa10□□□□□ -0.81
TPM1-210ENST00000558264 SEMA7AO75326 666 aa10□□□□□ -0.81
TPM1-210ENST00000558264 WBP4O75554 376 aaKnown RBP10□□□□□ -0.81
TPM1-210ENST00000558264 GADD45GO95257 159 aa10□□□□□ -0.81
TPM1-210ENST00000558264 HOXB6P17509 224 aaKnown RBP10□□□□□ -0.81
TPM1-210ENST00000558264 PCMT1P22061 227 aa10□□□□□ -0.81
TPM1-210ENST00000558264 POU1F1P28069 291 aa10□□□□□ -0.81
TPM1-210ENST00000558264 CD6P30203 668 aa10□□□□□ -0.81
TPM1-210ENST00000558264 MASP1P48740 699 aa10□□□□□ -0.81
TPM1-210ENST00000558264 MVKQ03426 396 aa10□□□□□ -0.81
TPM1-210ENST00000558264 SLC9A5Q14940 896 aa10□□□□□ -0.81
TPM1-210ENST00000558264 TJAP1Q5JTD0 557 aa10□□□□□ -0.81
TPM1-210ENST00000558264 TMEM107Q6UX40 140 aa10□□□□□ -0.81
TPM1-210ENST00000558264 AMIGO1Q86WK6 493 aa10□□□□□ -0.81
TPM1-210ENST00000558264 ZNF761Q86XN6 746 aaPredicted RBP10□□□□□ -0.81
TPM1-210ENST00000558264 LACC1Q8IV20 430 aa10□□□□□ -0.81
TPM1-210ENST00000558264 OR4D11Q8NGI4 311 aa10□□□□□ -0.81
TPM1-210ENST00000558264 OR4C15Q8NGM1 316 aa10□□□□□ -0.81
TPM1-210ENST00000558264 ZCCHC10Q8TBK6 192 aa10□□□□□ -0.81
TPM1-210ENST00000558264 GAB3Q8WWW8 586 aa10□□□□□ -0.81
TPM1-210ENST00000558264 DNASE1L2Q92874 299 aa10□□□□□ -0.81
TPM1-210ENST00000558264 THAP11Q96EK4 314 aa10□□□□□ -0.81
TPM1-210ENST00000558264 AMDHD1Q96NU7 426 aa10□□□□□ -0.81
TPM1-210ENST00000558264 BBS4Q96RK4 519 aa10□□□□□ -0.81
TPM1-210ENST00000558264 ACER3Q9NUN7 267 aa10□□□□□ -0.81
TPM1-210ENST00000558264 RNF6Q9Y252 685 aa10□□□□□ -0.81
TPM1-210ENST00000558264 FAM32AQ9Y421 112 aaKnown RBP10□□□□□ -0.81
TPM1-210ENST00000558264 PCDHGA10Q9Y5H3 936 aa10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms