RNA–Protein interactions for RNA: ENST00000558093.1

SPG11-206, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 526 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-206ENST00000558093 CUEDC2Q9H467 287 aa2.57□□□□□ -2
SPG11-206ENST00000558093 GRPEL1Q9HAV7 217 aa2.57□□□□□ -2
SPG11-206ENST00000558093 ZNF319Q9P2F9 582 aa2.57□□□□□ -2
SPG11-206ENST00000558093 CGNQ9P2M7 1197 aaKnown RBP2.57□□□□□ -2
SPG11-206ENST00000558093 EPS15L1Q9UBC2 864 aa2.57□□□□□ -2
SPG11-206ENST00000558093 SUN2Q9UH99 717 aa2.57□□□□□ -2
SPG11-206ENST00000558093 SPATA2Q9UM82 520 aa2.57□□□□□ -2
SPG11-206ENST00000558093 ETV7Q9Y603 341 aa2.57□□□□□ -2
SPG11-206ENST00000558093 PFASO15067 1338 aa2.57□□□□□ -2
SPG11-206ENST00000558093 SALL1Q9NSC2 1324 aa2.57□□□□□ -2
SPG11-206ENST00000558093 RAD54L2Q9Y4B4 1467 aa2.57□□□□□ -2
SPG11-206ENST00000558093 EIF4G1Q04637 1599 aaKnown RBP2.57□□□□□ -2
SPG11-206ENST00000558093 OR5H15A6NDH6 313 aa2.56□□□□□ -2
SPG11-206ENST00000558093 NEDD8-MDP1E9PL57 170 aa2.56□□□□□ -2
SPG11-206ENST00000558093 LRRTM2O43300 516 aa2.56□□□□□ -2
SPG11-206ENST00000558093 RAD51DO75771 328 aa2.56□□□□□ -2
SPG11-206ENST00000558093 OR6B1O95007 311 aa2.56□□□□□ -2
SPG11-206ENST00000558093 SIX3O95343 332 aaPredicted RBP2.56□□□□□ -2
SPG11-206ENST00000558093 TGDSO95455 350 aa2.56□□□□□ -2
SPG11-206ENST00000558093 MT-ND3P03897 115 aa2.56□□□□□ -2
SPG11-206ENST00000558093 KRTAP1-4P0C5Y4 121 aa2.56□□□□□ -2
SPG11-206ENST00000558093 OR9G9P0C7N8 305 aa2.56□□□□□ -2
SPG11-206ENST00000558093 KRT13P13646 458 aa2.56□□□□□ -2
SPG11-206ENST00000558093 PRELPP51888 382 aa2.56□□□□□ -2
SPG11-206ENST00000558093 KRTAP12-2P59991 146 aa2.56□□□□□ -2
SPG11-206ENST00000558093 POLR2FP61218 127 aaKnown RBP2.56□□□□□ -2
SPG11-206ENST00000558093 CRMP1Q14194 572 aa2.56□□□□□ -2
SPG11-206ENST00000558093 ACKR1Q16570 336 aa2.56□□□□□ -2
SPG11-206ENST00000558093 SLC22A6Q4U2R8 563 aa2.56□□□□□ -2
SPG11-206ENST00000558093 VWA2Q5GFL6 755 aa2.56□□□□□ -2
SPG11-206ENST00000558093 MARC1Q5VT66 337 aa2.56□□□□□ -2
SPG11-206ENST00000558093 TAF3Q5VWG9 929 aa2.56□□□□□ -2
SPG11-206ENST00000558093 LIPJQ5W064 366 aa2.56□□□□□ -2
SPG11-206ENST00000558093 OLFML2AQ68BL7 652 aa2.56□□□□□ -2
SPG11-206ENST00000558093 REP15Q6BDI9 236 aa2.56□□□□□ -2
SPG11-206ENST00000558093 SIX6OS1Q8N1H7 587 aa2.56□□□□□ -2
SPG11-206ENST00000558093 ZNF781Q8N8C0 355 aa2.56□□□□□ -2
SPG11-206ENST00000558093 CLEC1AQ8NC01 280 aa2.56□□□□□ -2
SPG11-206ENST00000558093 BEST4Q8NFU0 473 aa2.56□□□□□ -2
SPG11-206ENST00000558093 C8orf46Q8TAG6 207 aa2.56□□□□□ -2
SPG11-206ENST00000558093 SYAP1Q96A49 352 aaPredicted RBP2.56□□□□□ -2
SPG11-206ENST00000558093 TSGA13Q96PP4 275 aa2.56□□□□□ -2
SPG11-206ENST00000558093 CITED2Q99967 270 aaPredicted RBP2.56□□□□□ -2
SPG11-206ENST00000558093 HSD17B14Q9BPX1 270 aa2.56□□□□□ -2
SPG11-206ENST00000558093 ADPGKQ9BRR6 497 aa2.56□□□□□ -2
SPG11-206ENST00000558093 CCM2Q9BSQ5 444 aa2.56□□□□□ -2
SPG11-206ENST00000558093 THUMPD3Q9BV44 507 aaKnown RBP2.56□□□□□ -2
SPG11-206ENST00000558093 FANCFQ9NPI8 374 aa2.56□□□□□ -2
SPG11-206ENST00000558093 GPR173Q9NS66 373 aa2.56□□□□□ -2
SPG11-206ENST00000558093 ARGLU1Q9NWB6 273 aaPredicted RBP2.56□□□□□ -2
SPG11-206ENST00000558093 UTP6Q9NYH9 597 aaKnown RBP2.56□□□□□ -2
SPG11-206ENST00000558093 MTRRQ9UBK8 725 aa2.56□□□□□ -2
SPG11-206ENST00000558093 ITM2BQ9Y287 266 aa2.56□□□□□ -2
SPG11-206ENST00000558093 FBXO7Q9Y3I1 522 aa2.56□□□□□ -2
SPG11-206ENST00000558093 VGLL3A8MV65 326 aa2.55□□□□□ -2
SPG11-206ENST00000558093 FAM25EA8MYX2 175 aa2.55□□□□□ -2
SPG11-206ENST00000558093 M0R296 226 aa2.55□□□□□ -2
SPG11-206ENST00000558093 IFIT3O14879 490 aaKnown RBP2.55□□□□□ -2
SPG11-206ENST00000558093 HAT1O14929 419 aa2.55□□□□□ -2
SPG11-206ENST00000558093 P2RX6O15547 441 aa2.55□□□□□ -2
SPG11-206ENST00000558093 BBOX1O75936 387 aa2.55□□□□□ -2
SPG11-206ENST00000558093 KBTBD11O94819 623 aa2.55□□□□□ -2
SPG11-206ENST00000558093 KIAA0754O94854 1291 aa2.55□□□□□ -2
SPG11-206ENST00000558093 SLU7O95391 586 aaKnown RBP2.55□□□□□ -2
SPG11-206ENST00000558093 SEMA4FO95754 770 aa2.55□□□□□ -2
SPG11-206ENST00000558093 GUCA1CO95843 209 aa2.55□□□□□ -2
SPG11-206ENST00000558093 HCKP08631 526 aa2.55□□□□□ -2
SPG11-206ENST00000558093 DUX4L4P0CJ87 422 aa2.55□□□□□ -2
SPG11-206ENST00000558093 IFNAR1P17181 557 aa2.55□□□□□ -2
SPG11-206ENST00000558093 ID1P41134 155 aa2.55□□□□□ -2
SPG11-206ENST00000558093 ALDH3B1P43353 468 aa2.55□□□□□ -2
SPG11-206ENST00000558093 BRCC3P46736 316 aa2.55□□□□□ -2
SPG11-206ENST00000558093 PPIAP62937 165 aaKnown RBP2.55□□□□□ -2
SPG11-206ENST00000558093 AP1B1Q10567 949 aa2.55□□□□□ -2
SPG11-206ENST00000558093 SHROOM1Q2M3G4 852 aaPredicted RBP2.55□□□□□ -2
SPG11-206ENST00000558093 IQCCQ4KMZ1 466 aa2.55□□□□□ -2
SPG11-206ENST00000558093 FHL5Q5TD97 284 aa2.55□□□□□ -2
SPG11-206ENST00000558093 RSBN1Q5VWQ0 802 aaPredicted RBP2.55□□□□□ -2
SPG11-206ENST00000558093 TATDN1Q6P1N9 297 aa2.55□□□□□ -2
SPG11-206ENST00000558093 CNSTQ6PJW8 725 aa2.55□□□□□ -2
SPG11-206ENST00000558093 ABRAXAS1Q6UWZ7 409 aa2.55□□□□□ -2
SPG11-206ENST00000558093 SAMD12Q8N8I0 201 aa2.55□□□□□ -2
SPG11-206ENST00000558093 UXS1Q8NBZ7 420 aa2.55□□□□□ -2
SPG11-206ENST00000558093 GANCQ8TET4 914 aa2.55□□□□□ -2
SPG11-206ENST00000558093 DEPDC1BQ8WUY9 529 aa2.55□□□□□ -2
SPG11-206ENST00000558093 SPATA17Q96L03 361 aa2.55□□□□□ -2
SPG11-206ENST00000558093 CCDC114Q96M63 670 aa2.55□□□□□ -2
SPG11-206ENST00000558093 GSDMAQ96QA5 445 aa2.55□□□□□ -2
SPG11-206ENST00000558093 LRRC2Q9BYS8 371 aa2.55□□□□□ -2
SPG11-206ENST00000558093 RPAP3Q9H6T3 665 aaPredicted RBP2.55□□□□□ -2
SPG11-206ENST00000558093 ZNF665Q9H7R5 613 aa2.55□□□□□ -2
SPG11-206ENST00000558093 ZWILCHQ9H900 591 aa2.55□□□□□ -2
SPG11-206ENST00000558093 SLCO1C1Q9NYB5 712 aa2.55□□□□□ -2
SPG11-206ENST00000558093 ARMCX3Q9UH62 379 aaPredicted RBP2.55□□□□□ -2
SPG11-206ENST00000558093 RSPH14Q9UHP6 348 aa2.55□□□□□ -2
SPG11-206ENST00000558093 CELA1Q9UNI1 258 aa2.55□□□□□ -2
SPG11-206ENST00000558093 GPR132Q9UNW8 380 aa2.55□□□□□ -2
SPG11-206ENST00000558093 MTF2Q9Y483 593 aaPredicted RBP2.55□□□□□ -2
SPG11-206ENST00000558093 LINC00854A0A1B0GVQ3 168 aa2.54□□□□□ -2
SPG11-206ENST00000558093 FOXI3A8MTJ6 420 aaPredicted RBP2.54□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms