RNA–Protein interactions for RNA: ENST00000557262.5

TUBB3-213, Transcript of tubulin beta 3 class III, humanhuman

TSL 1 (best)

Gene TUBB3, Length 888 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-213ENST00000557262 DYRK3O43781 588 aa14.7□□□□□ -0.06
TUBB3-213ENST00000557262 FGF17O60258 216 aa14.7□□□□□ -0.06
TUBB3-213ENST00000557262 ZNF354AO60765 605 aaPredicted RBP14.7□□□□□ -0.06
TUBB3-213ENST00000557262 IGHG3P01860 377 aa14.7□□□□□ -0.06
TUBB3-213ENST00000557262 P04436 131 aa14.7□□□□□ -0.06
TUBB3-213ENST00000557262 MTHFD2P13995 350 aa14.7□□□□□ -0.06
TUBB3-213ENST00000557262 CHRNB4P30926 498 aa14.7□□□□□ -0.06
TUBB3-213ENST00000557262 TLX1P31314 330 aaPredicted RBP14.7□□□□□ -0.06
TUBB3-213ENST00000557262 PIK3CBP42338 1070 aa14.7□□□□□ -0.06
TUBB3-213ENST00000557262 ARFIP1P53367 373 aa14.7□□□□□ -0.06
TUBB3-213ENST00000557262 TLE4Q04727 773 aa14.7□□□□□ -0.06
TUBB3-213ENST00000557262 PMPCAQ10713 525 aa14.7□□□□□ -0.06
TUBB3-213ENST00000557262 ASPHQ12797 758 aa14.7□□□□□ -0.06
TUBB3-213ENST00000557262 NAB1Q13506 487 aa14.7□□□□□ -0.06
TUBB3-213ENST00000557262 FAM47EQ6ZV65 393 aa14.7□□□□□ -0.06
TUBB3-213ENST00000557262 ACAD11Q709F0 780 aa14.7□□□□□ -0.06
TUBB3-213ENST00000557262 CCDC91Q7Z6B0 441 aa14.7□□□□□ -0.06
TUBB3-213ENST00000557262 GPR180Q86V85 440 aa14.7□□□□□ -0.06
TUBB3-213ENST00000557262 TEX9Q8N6V9 391 aa14.7□□□□□ -0.06
TUBB3-213ENST00000557262 HUS1BQ8NHY5 278 aa14.7□□□□□ -0.06
TUBB3-213ENST00000557262 RHEBL1Q8TAI7 183 aa14.7□□□□□ -0.06
TUBB3-213ENST00000557262 NUBPLQ8TB37 319 aa14.7□□□□□ -0.06
TUBB3-213ENST00000557262 FBXO25Q8TCJ0 367 aa14.7□□□□□ -0.06
TUBB3-213ENST00000557262 TANKQ92844 425 aa14.7□□□□□ -0.06
TUBB3-213ENST00000557262 DGAT2Q96PD7 388 aa14.7□□□□□ -0.06
TUBB3-213ENST00000557262 CENPKQ9BS16 269 aa14.7□□□□□ -0.06
TUBB3-213ENST00000557262 SORBS1Q9BX66 1292 aaKnown RBP14.7□□□□□ -0.06
TUBB3-213ENST00000557262 RAB17Q9H0T7 212 aa14.7□□□□□ -0.06
TUBB3-213ENST00000557262 MCCC2Q9HCC0 563 aa14.7□□□□□ -0.06
TUBB3-213ENST00000557262 KCNJ16Q9NPI9 418 aa14.7□□□□□ -0.06
TUBB3-213ENST00000557262 ITGB1BP2Q9UKP3 347 aa14.7□□□□□ -0.06
TUBB3-213ENST00000557262 TSC22D4Q9Y3Q8 395 aa14.7□□□□□ -0.06
TUBB3-213ENST00000557262 ANGPTL3Q9Y5C1 460 aa14.7□□□□□ -0.06
TUBB3-213ENST00000557262 PCDHGA11Q9Y5H2 935 aa14.7□□□□□ -0.06
TUBB3-213ENST00000557262 A0A0G2JMM0 328 aa14.69□□□□□ -0.06
TUBB3-213ENST00000557262 A0A1B0GVC2 190 aa14.69□□□□□ -0.06
TUBB3-213ENST00000557262 A0A1W2PPB8 328 aa14.69□□□□□ -0.06
TUBB3-213ENST00000557262 A0A1W2PRS3 328 aa14.69□□□□□ -0.06
TUBB3-213ENST00000557262 CCDC189A1A4V9 331 aa14.69□□□□□ -0.06
TUBB3-213ENST00000557262 SYCE1LA8MT33 242 aa14.69□□□□□ -0.06
TUBB3-213ENST00000557262 KIR3DP1A8MWS1 328 aa14.69□□□□□ -0.06
TUBB3-213ENST00000557262 BCKDKO14874 412 aa14.69□□□□□ -0.06
TUBB3-213ENST00000557262 IGKV3-11P04433 115 aa14.69□□□□□ -0.06
TUBB3-213ENST00000557262 PTX3P26022 381 aaPredicted RBP14.69□□□□□ -0.06
TUBB3-213ENST00000557262 CASQ1P31415 396 aa14.69□□□□□ -0.06
TUBB3-213ENST00000557262 RAP1GDS1P52306 607 aa14.69□□□□□ -0.06
TUBB3-213ENST00000557262 KRTAP10-9P60411 292 aa14.69□□□□□ -0.06
TUBB3-213ENST00000557262 GUCY2DQ02846 1103 aa14.69□□□□□ -0.06
TUBB3-213ENST00000557262 FOXO1Q12778 655 aa14.69□□□□□ -0.06
TUBB3-213ENST00000557262 DDX39BQ13838 428 aaKnown RBP14.69□□□□□ -0.06
TUBB3-213ENST00000557262 SLC10A1Q14973 349 aa14.69□□□□□ -0.06
TUBB3-213ENST00000557262 TRADDQ15628 312 aa14.69□□□□□ -0.06
TUBB3-213ENST00000557262 FAM83EQ2M2I3 478 aa14.69□□□□□ -0.06
TUBB3-213ENST00000557262 HYAL4Q2M3T9 481 aa14.69□□□□□ -0.06
TUBB3-213ENST00000557262 LIPJQ5W064 366 aa14.69□□□□□ -0.06
TUBB3-213ENST00000557262 SLC22A10Q63ZE4 541 aa14.69□□□□□ -0.06
TUBB3-213ENST00000557262 ZCCHC7Q8N3Z6 543 aaKnown RBP14.69□□□□□ -0.06
TUBB3-213ENST00000557262 FAM109AQ8N4B1 249 aa14.69□□□□□ -0.06
TUBB3-213ENST00000557262 RNF175Q8N4F7 328 aa14.69□□□□□ -0.06
TUBB3-213ENST00000557262 RPRMLQ8N4K4 120 aa14.69□□□□□ -0.06
TUBB3-213ENST00000557262 SLC15A4Q8N697 577 aa14.69□□□□□ -0.06
TUBB3-213ENST00000557262 TMEM251Q8N6I4 163 aa14.69□□□□□ -0.06
TUBB3-213ENST00000557262 PPWD1Q96BP3 646 aaKnown RBP14.69□□□□□ -0.06
TUBB3-213ENST00000557262 ART5Q96L15 291 aa14.69□□□□□ -0.06
TUBB3-213ENST00000557262 SMC6Q96SB8 1091 aa14.69□□□□□ -0.06
TUBB3-213ENST00000557262 UCK2Q9BZX2 261 aa14.69□□□□□ -0.06
TUBB3-213ENST00000557262 PNPLA3Q9NST1 481 aa14.69□□□□□ -0.06
TUBB3-213ENST00000557262 PHF11Q9UIL8 331 aa14.69□□□□□ -0.06
TUBB3-213ENST00000557262 CELSR1Q9NYQ6 3014 aa14.68□□□□□ -0.06
TUBB3-213ENST00000557262 A0A087X1B8 175 aa14.68□□□□□ -0.06
TUBB3-213ENST00000557262 PROM1O43490 865 aa14.68□□□□□ -0.06
TUBB3-213ENST00000557262 SUSD5O60279 629 aa14.68□□□□□ -0.06
TUBB3-213ENST00000557262 TOXO94900 526 aa14.68□□□□□ -0.06
TUBB3-213ENST00000557262 C2P06681 752 aa14.68□□□□□ -0.06
TUBB3-213ENST00000557262 CCL3P10147 92 aa14.68□□□□□ -0.06
TUBB3-213ENST00000557262 MAGEA5P43359 124 aa14.68□□□□□ -0.06
TUBB3-213ENST00000557262 DNASE1L1P49184 302 aa14.68□□□□□ -0.06
TUBB3-213ENST00000557262 NUP107P57740 925 aa14.68□□□□□ -0.06
TUBB3-213ENST00000557262 PLIN5Q00G26 463 aa14.68□□□□□ -0.06
TUBB3-213ENST00000557262 FOLH1Q04609 750 aa14.68□□□□□ -0.06
TUBB3-213ENST00000557262 ZNF791Q3KP31 576 aaPredicted RBP14.68□□□□□ -0.06
TUBB3-213ENST00000557262 C18orf63Q68DL7 685 aa14.68□□□□□ -0.06
TUBB3-213ENST00000557262 ZDHHC24Q6UX98 284 aa14.68□□□□□ -0.06
TUBB3-213ENST00000557262 TRILQ7L0X0 811 aa14.68□□□□□ -0.06
TUBB3-213ENST00000557262 MYLK4Q86YV6 388 aaPredicted RBP14.68□□□□□ -0.06
TUBB3-213ENST00000557262 CCDC71Q8IV32 467 aaPredicted RBP14.68□□□□□ -0.06
TUBB3-213ENST00000557262 OR5M9Q8NGP3 310 aa14.68□□□□□ -0.06
TUBB3-213ENST00000557262 OR5M3Q8NGP4 307 aa14.68□□□□□ -0.06
TUBB3-213ENST00000557262 SLC22A8Q8TCC7 542 aa14.68□□□□□ -0.06
TUBB3-213ENST00000557262 KCTD4Q8WVF5 259 aa14.68□□□□□ -0.06
TUBB3-213ENST00000557262 MTERF1Q99551 399 aaKnown RBP14.68□□□□□ -0.06
TUBB3-213ENST00000557262 DMRT3Q9NQL9 472 aa14.68□□□□□ -0.06
TUBB3-213ENST00000557262 SDAD1Q9NVU7 687 aaKnown RBP eCLIP14.68□□□□□ -0.06
TUBB3-213ENST00000557262 TUBA8Q9NY65 449 aaPredicted RBP14.68□□□□□ -0.06
TUBB3-213ENST00000557262 ATG4BQ9Y4P1 393 aa14.68□□□□□ -0.06
TUBB3-213ENST00000557262 POLQO75417 2590 aa14.68□□□□□ -0.06
TUBB3-213ENST00000557262 ATP6AP2A0A1C7CYW4 349 aa14.67□□□□□ -0.06
TUBB3-213ENST00000557262 NKX2-6A6NCS4 301 aa14.67□□□□□ -0.06
TUBB3-213ENST00000557262 FOXO6A8MYZ6 492 aa14.67□□□□□ -0.06
TUBB3-213ENST00000557262 H0YIV9 168 aa14.67□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms