RNA–Protein interactions for RNA: ENST00000556951.5

PSEN1-219, Transcript of presenilin 1, humanhuman

TSL 2

Gene PSEN1, Length 552 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-219ENST00000556951 SF1Q15637 639 aaKnown RBP11.91□□□□□ -0.5
PSEN1-219ENST00000556951 CEBPEQ15744 281 aa11.91□□□□□ -0.5
PSEN1-219ENST00000556951 ABHD17BQ5VST6 288 aa11.91□□□□□ -0.5
PSEN1-219ENST00000556951 METTL21CQ5VZV1 264 aa11.91□□□□□ -0.5
PSEN1-219ENST00000556951 KANK2Q63ZY3 851 aa11.91□□□□□ -0.5
PSEN1-219ENST00000556951 AGTRAPQ6RW13 159 aa11.91□□□□□ -0.5
PSEN1-219ENST00000556951 C3P1Q6ZMU1 363 aa11.91□□□□□ -0.5
PSEN1-219ENST00000556951 MILR1Q7Z6M3 343 aa11.91□□□□□ -0.5
PSEN1-219ENST00000556951 MTDHQ86UE4 582 aaKnown RBP11.91□□□□□ -0.5
PSEN1-219ENST00000556951 DCUN1D3Q8IWE4 304 aa11.91□□□□□ -0.5
PSEN1-219ENST00000556951 SHISA5Q8N114 240 aa11.91□□□□□ -0.5
PSEN1-219ENST00000556951 GBP7Q8N8V2 638 aaPredicted RBP11.91□□□□□ -0.5
PSEN1-219ENST00000556951 AMER3Q8N944 861 aa11.91□□□□□ -0.5
PSEN1-219ENST00000556951 SNX31Q8N9S9 440 aa11.91□□□□□ -0.5
PSEN1-219ENST00000556951 OR56A3Q8NH54 315 aa11.91□□□□□ -0.5
PSEN1-219ENST00000556951 SUN3Q8TAQ9 357 aa11.91□□□□□ -0.5
PSEN1-219ENST00000556951 SLC22A18Q96BI1 424 aa11.91□□□□□ -0.5
PSEN1-219ENST00000556951 SDCCAG3Q96C92 435 aa11.91□□□□□ -0.5
PSEN1-219ENST00000556951 MAGED4Q96JG8 741 aa11.91□□□□□ -0.5
PSEN1-219ENST00000556951 NPAS2Q99743 824 aa11.91□□□□□ -0.5
PSEN1-219ENST00000556951 VKORC1Q9BQB6 163 aa11.91□□□□□ -0.5
PSEN1-219ENST00000556951 CCDC28BQ9BUN5 200 aa11.91□□□□□ -0.5
PSEN1-219ENST00000556951 TNFRSF12AQ9NP84 129 aa11.91□□□□□ -0.5
PSEN1-219ENST00000556951 PFDN4Q9NQP4 134 aa11.91□□□□□ -0.5
PSEN1-219ENST00000556951 NPDC1Q9NQX5 325 aaPredicted RBP11.91□□□□□ -0.5
PSEN1-219ENST00000556951 DNAJC11Q9NVH1 559 aa11.91□□□□□ -0.5
PSEN1-219ENST00000556951 A0A0J9YVX5 310 aa11.9□□□□□ -0.5
PSEN1-219ENST00000556951 TMEM233B4DJY2 109 aa11.9□□□□□ -0.5
PSEN1-219ENST00000556951 NPIPA5E9PKD4 350 aa11.9□□□□□ -0.5
PSEN1-219ENST00000556951 FAM227AF5H4B4 570 aa11.9□□□□□ -0.5
PSEN1-219ENST00000556951 WDR47O94967 919 aa11.9□□□□□ -0.5
PSEN1-219ENST00000556951 CHEK2O96017 543 aa11.9□□□□□ -0.5
PSEN1-219ENST00000556951 FBLP22087 321 aaKnown RBP11.9□□□□□ -0.5
PSEN1-219ENST00000556951 CXCR2P25025 360 aa11.9□□□□□ -0.5
PSEN1-219ENST00000556951 PSMB5P28074 263 aa11.9□□□□□ -0.5
PSEN1-219ENST00000556951 SERPINB3P29508 390 aa11.9□□□□□ -0.5
PSEN1-219ENST00000556951 CD96P40200 585 aa11.9□□□□□ -0.5
PSEN1-219ENST00000556951 HCFC1P51610 2035 aa11.9□□□□□ -0.5
PSEN1-219ENST00000556951 SNRPNP63162 240 aaKnown RBP11.9□□□□□ -0.5
PSEN1-219ENST00000556951 HSF1Q00613 529 aa11.9□□□□□ -0.5
PSEN1-219ENST00000556951 ALDH6A1Q02252 535 aaKnown RBP11.9□□□□□ -0.5
PSEN1-219ENST00000556951 BTKQ06187 659 aa11.9□□□□□ -0.5
PSEN1-219ENST00000556951 ZNF33BQ06732 778 aa11.9□□□□□ -0.5
PSEN1-219ENST00000556951 TFF3Q07654 80 aa11.9□□□□□ -0.5
PSEN1-219ENST00000556951 NAE1Q13564 534 aa11.9□□□□□ -0.5
PSEN1-219ENST00000556951 TUBA3CQ13748 450 aa11.9□□□□□ -0.5
PSEN1-219ENST00000556951 CCSMST1Q4G0I0 132 aa11.9□□□□□ -0.5
PSEN1-219ENST00000556951 SLC9B1Q4ZJI4 515 aa11.9□□□□□ -0.5
PSEN1-219ENST00000556951 RNFT1Q5M7Z0 435 aa11.9□□□□□ -0.5
PSEN1-219ENST00000556951 TUBA3EQ6PEY2 450 aa11.9□□□□□ -0.5
PSEN1-219ENST00000556951 CCDC121Q6ZUS5 278 aa11.9□□□□□ -0.5
PSEN1-219ENST00000556951 ACAD11Q709F0 780 aa11.9□□□□□ -0.5
PSEN1-219ENST00000556951 YTHDF3Q7Z739 585 aaKnown RBP11.9□□□□□ -0.5
PSEN1-219ENST00000556951 ARHGEF39Q8N4T4 335 aa11.9□□□□□ -0.5
PSEN1-219ENST00000556951 ACTRT2Q8TDY3 377 aa11.9□□□□□ -0.5
PSEN1-219ENST00000556951 CCT6BQ92526 530 aa11.9□□□□□ -0.5
PSEN1-219ENST00000556951 SCMH1Q96GD3 660 aa11.9□□□□□ -0.5
PSEN1-219ENST00000556951 FRMD6Q96NE9 622 aa11.9□□□□□ -0.5
PSEN1-219ENST00000556951 CCT7Q99832 543 aa11.9□□□□□ -0.5
PSEN1-219ENST00000556951 EBF4Q9BQW3 602 aa11.9□□□□□ -0.5
PSEN1-219ENST00000556951 NTMT1Q9BV86 223 aa11.9□□□□□ -0.5
PSEN1-219ENST00000556951 NUF2Q9BZD4 464 aa11.9□□□□□ -0.5
PSEN1-219ENST00000556951 TGIF2Q9GZN2 237 aa11.9□□□□□ -0.5
PSEN1-219ENST00000556951 ATG10Q9H0Y0 220 aa11.9□□□□□ -0.5
PSEN1-219ENST00000556951 MEAF6Q9HAF1 191 aa11.9□□□□□ -0.5
PSEN1-219ENST00000556951 INTS7Q9NVH2 962 aaKnown RBP11.9□□□□□ -0.5
PSEN1-219ENST00000556951 NPIPA1Q9UND3 350 aa11.9□□□□□ -0.5
PSEN1-219ENST00000556951 MEGF8Q7Z7M0 2845 aa11.9□□□□□ -0.5
PSEN1-219ENST00000556951 A0A1W2PPV9 198 aa11.89□□□□□ -0.51
PSEN1-219ENST00000556951 ZNF839A8K0R7 811 aa11.89□□□□□ -0.51
PSEN1-219ENST00000556951 FAM171A2A8MVW0 826 aa11.89□□□□□ -0.51
PSEN1-219ENST00000556951 FCHO1O14526 889 aa11.89□□□□□ -0.51
PSEN1-219ENST00000556951 FOXS1O43638 330 aa11.89□□□□□ -0.51
PSEN1-219ENST00000556951 MAN1A2O60476 641 aa11.89□□□□□ -0.51
PSEN1-219ENST00000556951 CLDN9O95484 217 aa11.89□□□□□ -0.51
PSEN1-219ENST00000556951 SLC16A8O95907 504 aa11.89□□□□□ -0.51
PSEN1-219ENST00000556951 ICAM2P13598 275 aa11.89□□□□□ -0.51
PSEN1-219ENST00000556951 PNLIPRP1P54315 467 aa11.89□□□□□ -0.51
PSEN1-219ENST00000556951 PCDH1Q08174 1060 aa11.89□□□□□ -0.51
PSEN1-219ENST00000556951 TRAF3Q13114 568 aa11.89□□□□□ -0.51
PSEN1-219ENST00000556951 DSG2Q14126 1118 aa11.89□□□□□ -0.51
PSEN1-219ENST00000556951 ARHGAP19Q14CB8 494 aa11.89□□□□□ -0.51
PSEN1-219ENST00000556951 PDCD2Q16342 344 aaPredicted RBP11.89□□□□□ -0.51
PSEN1-219ENST00000556951 MUM1Q2TAK8 710 aa11.89□□□□□ -0.51
PSEN1-219ENST00000556951 SPDYAQ5MJ70 313 aa11.89□□□□□ -0.51
PSEN1-219ENST00000556951 FCRLBQ6BAA4 426 aa11.89□□□□□ -0.51
PSEN1-219ENST00000556951 CLEC6AQ6EIG7 209 aa11.89□□□□□ -0.51
PSEN1-219ENST00000556951 CAPN13Q6MZZ7 669 aaPredicted RBP11.89□□□□□ -0.51
PSEN1-219ENST00000556951 RNF44Q7L0R7 432 aa11.89□□□□□ -0.51
PSEN1-219ENST00000556951 THOC6Q86W42 341 aaKnown RBP11.89□□□□□ -0.51
PSEN1-219ENST00000556951 BEST3Q8N1M1 668 aa11.89□□□□□ -0.51
PSEN1-219ENST00000556951 MARVELD2Q8N4S9 558 aa11.89□□□□□ -0.51
PSEN1-219ENST00000556951 FITM2Q8N6M3 262 aa11.89□□□□□ -0.51
PSEN1-219ENST00000556951 OR52B6Q8NGF0 335 aa11.89□□□□□ -0.51
PSEN1-219ENST00000556951 OR2A1Q8NGT9 310 aa11.89□□□□□ -0.51
PSEN1-219ENST00000556951 METTL6Q8TCB7 284 aa11.89□□□□□ -0.51
PSEN1-219ENST00000556951 ZNF480Q8WV37 535 aa11.89□□□□□ -0.51
PSEN1-219ENST00000556951 MAELQ96JY0 434 aaKnown RBP11.89□□□□□ -0.51
PSEN1-219ENST00000556951 TUBB6Q9BUF5 446 aa11.89□□□□□ -0.51
PSEN1-219ENST00000556951 MYLK2Q9H1R3 596 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms