RNA–Protein interactions for RNA: ENST00000555055.5

XRCC3-211, Transcript of X-ray repair cross complementing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene XRCC3, Length 2,584 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-211ENST00000555055 PDZK1P1A8MUH7 402 aa14.12□□□□□ -0.15
XRCC3-211ENST00000555055 PRMT3O60678 531 aa14.12□□□□□ -0.15
XRCC3-211ENST00000555055 NME6O75414 186 aaPredicted RBP14.12□□□□□ -0.15
XRCC3-211ENST00000555055 KELP23276 732 aa14.12□□□□□ -0.15
XRCC3-211ENST00000555055 CHI3L1P36222 383 aaPredicted RBP14.12□□□□□ -0.15
XRCC3-211ENST00000555055 HSPB3Q12988 150 aa14.12□□□□□ -0.15
XRCC3-211ENST00000555055 TMEM196Q5HYL7 178 aa14.12□□□□□ -0.15
XRCC3-211ENST00000555055 RPS26P11Q5JNZ5 115 aaPredicted RBP14.12□□□□□ -0.15
XRCC3-211ENST00000555055 TNFAIP8L2Q6P589 184 aaPredicted RBP14.12□□□□□ -0.15
XRCC3-211ENST00000555055 KLHDC8AQ8IYD2 350 aa14.12□□□□□ -0.15
XRCC3-211ENST00000555055 LILRB4Q8NHJ6 448 aa14.12□□□□□ -0.15
XRCC3-211ENST00000555055 SLC38A4Q969I6 547 aa14.12□□□□□ -0.15
XRCC3-211ENST00000555055 TRMT61BQ9BVS5 477 aaKnown RBP14.12□□□□□ -0.15
XRCC3-211ENST00000555055 SYNPO2LQ9H987 977 aa14.12□□□□□ -0.15
XRCC3-211ENST00000555055 TEX10Q9NXF1 929 aaPredicted RBP14.12□□□□□ -0.15
XRCC3-211ENST00000555055 CCDC59Q9P031 241 aaKnown RBP14.12□□□□□ -0.15
XRCC3-211ENST00000555055 COL6A3P12111 3177 aa14.12□□□□□ -0.15
XRCC3-211ENST00000555055 PRAMEF25A6NGN4 478 aa14.12□□□□□ -0.15
XRCC3-211ENST00000555055 KCNK2O95069 426 aa14.12□□□□□ -0.15
XRCC3-211ENST00000555055 MT-ND2P03891 347 aa14.12□□□□□ -0.15
XRCC3-211ENST00000555055 PSMB9P28065 219 aa14.12□□□□□ -0.15
XRCC3-211ENST00000555055 E2F2Q14209 437 aa14.12□□□□□ -0.15
XRCC3-211ENST00000555055 ITPRIPL2Q3MIP1 535 aa14.12□□□□□ -0.15
XRCC3-211ENST00000555055 FAM71E1Q6IPT2 247 aa14.12□□□□□ -0.15
XRCC3-211ENST00000555055 ANKRD54Q6NXT1 300 aa14.12□□□□□ -0.15
XRCC3-211ENST00000555055 CBLL1Q75N03 491 aa14.12□□□□□ -0.15
XRCC3-211ENST00000555055 TSPYL5Q86VY4 417 aaPredicted RBP14.12□□□□□ -0.15
XRCC3-211ENST00000555055 METTL4Q8N3J2 472 aa14.12□□□□□ -0.15
XRCC3-211ENST00000555055 EXOSC8Q96B26 276 aaKnown RBP14.12□□□□□ -0.15
XRCC3-211ENST00000555055 ZNF717Q9BY31 904 aaPredicted RBP14.12□□□□□ -0.15
XRCC3-211ENST00000555055 RASSF1Q9NS23 344 aa14.12□□□□□ -0.15
XRCC3-211ENST00000555055 RHCGQ9UBD6 479 aa14.12□□□□□ -0.15
XRCC3-211ENST00000555055 RBMX2Q9Y388 322 aaKnown RBP14.12□□□□□ -0.15
XRCC3-211ENST00000555055 SCN2AQ99250 2005 aa14.12□□□□□ -0.15
XRCC3-211ENST00000555055 IGKV1-8A0A0C4DH67 115 aa14.11□□□□□ -0.15
XRCC3-211ENST00000555055 A0A1W2PRB8 838 aa14.11□□□□□ -0.15
XRCC3-211ENST00000555055 POM121BA6NF01 834 aa14.11□□□□□ -0.15
XRCC3-211ENST00000555055 EFCAB9A8MZ26 197 aa14.11□□□□□ -0.15
XRCC3-211ENST00000555055 E9PQ18 207 aa14.11□□□□□ -0.15
XRCC3-211ENST00000555055 FOXE1O00358 373 aaPredicted RBP14.11□□□□□ -0.15
XRCC3-211ENST00000555055 EML2O95834 649 aa14.11□□□□□ -0.15
XRCC3-211ENST00000555055 POU2F2P09086 479 aa14.11□□□□□ -0.15
XRCC3-211ENST00000555055 TCEA1P23193 301 aaKnown RBP14.11□□□□□ -0.15
XRCC3-211ENST00000555055 RRM2P31350 389 aa14.11□□□□□ -0.15
XRCC3-211ENST00000555055 ETV6P41212 452 aa14.11□□□□□ -0.15
XRCC3-211ENST00000555055 KIR2DL1P43626 348 aaPredicted RBP14.11□□□□□ -0.15
XRCC3-211ENST00000555055 MAP2K4P45985 399 aa14.11□□□□□ -0.15
XRCC3-211ENST00000555055 KCNJ10P78508 379 aa14.11□□□□□ -0.15
XRCC3-211ENST00000555055 MAPK11Q15759 364 aa14.11□□□□□ -0.15
XRCC3-211ENST00000555055 STEAP3Q658P3 488 aa14.11□□□□□ -0.15
XRCC3-211ENST00000555055 KDM4DQ6B0I6 523 aa14.11□□□□□ -0.15
XRCC3-211ENST00000555055 TSEN54Q7Z6J9 526 aaKnown RBP14.11□□□□□ -0.15
XRCC3-211ENST00000555055 SLC9B2Q86UD5 537 aa14.11□□□□□ -0.15
XRCC3-211ENST00000555055 PHF6Q8IWS0 365 aaKnown RBP eCLIP14.11□□□□□ -0.15
XRCC3-211ENST00000555055 ATG16L2Q8NAA4 619 aa14.11□□□□□ -0.15
XRCC3-211ENST00000555055 TP53I13Q8NBR0 393 aaPredicted RBP14.11□□□□□ -0.15
XRCC3-211ENST00000555055 PROX1Q92786 737 aa14.11□□□□□ -0.15
XRCC3-211ENST00000555055 RAB8BQ92930 207 aa14.11□□□□□ -0.15
XRCC3-211ENST00000555055 FCRL4Q96PJ5 515 aa14.11□□□□□ -0.15
XRCC3-211ENST00000555055 DCSTAMPQ9H295 470 aa14.11□□□□□ -0.15
XRCC3-211ENST00000555055 RUBCNLQ9H714 662 aa14.11□□□□□ -0.15
XRCC3-211ENST00000555055 CXorf36Q9H7Y0 433 aa14.11□□□□□ -0.15
XRCC3-211ENST00000555055 TRPV4Q9HBA0 871 aa14.11□□□□□ -0.15
XRCC3-211ENST00000555055 POLE4Q9NR33 117 aa14.11□□□□□ -0.15
XRCC3-211ENST00000555055 THUMPD1Q9NXG2 353 aaKnown RBP14.11□□□□□ -0.15
XRCC3-211ENST00000555055 BTNL2Q9UIR0 455 aa14.11□□□□□ -0.15
XRCC3-211ENST00000555055 NDRG4Q9ULP0 352 aaKnown RBP14.11□□□□□ -0.15
XRCC3-211ENST00000555055 MUC3AQ02505 3323 aa14.11□□□□□ -0.15
XRCC3-211ENST00000555055 RNASET2O00584 256 aaKnown RBP14.11□□□□□ -0.15
XRCC3-211ENST00000555055 TMPRSS11DO60235 418 aa14.11□□□□□ -0.15
XRCC3-211ENST00000555055 AK4P27144 223 aaPredicted RBP14.11□□□□□ -0.15
XRCC3-211ENST00000555055 SGCGQ13326 291 aa14.11□□□□□ -0.15
XRCC3-211ENST00000555055 MAD2L1BPQ15013 274 aaPredicted RBP14.11□□□□□ -0.15
XRCC3-211ENST00000555055 USP43Q70EL4 1123 aa14.11□□□□□ -0.15
XRCC3-211ENST00000555055 CCL4L1Q8NHW4 92 aa14.11□□□□□ -0.15
XRCC3-211ENST00000555055 WDR34Q96EX3 536 aa14.11□□□□□ -0.15
XRCC3-211ENST00000555055 SNX18Q96RF0 628 aa14.11□□□□□ -0.15
XRCC3-211ENST00000555055 PITX2Q99697 317 aa14.11□□□□□ -0.15
XRCC3-211ENST00000555055 C17orf62Q9BQA9 187 aa14.11□□□□□ -0.15
XRCC3-211ENST00000555055 ITPAQ9BY32 194 aa14.11□□□□□ -0.15
XRCC3-211ENST00000555055 KLHL31Q9H511 634 aa14.11□□□□□ -0.15
XRCC3-211ENST00000555055 LHX9Q9NQ69 397 aa14.11□□□□□ -0.15
XRCC3-211ENST00000555055 CFAP54Q96N23 3096 aa14.11□□□□□ -0.15
XRCC3-211ENST00000555055 A0A1W2PS29 197 aa14.1□□□□□ -0.15
XRCC3-211ENST00000555055 ANKRD34BA5PLL1 514 aa14.1□□□□□ -0.15
XRCC3-211ENST00000555055 SUV39H1O43463 412 aa14.1□□□□□ -0.15
XRCC3-211ENST00000555055 EGFP01133 1207 aa14.1□□□□□ -0.15
XRCC3-211ENST00000555055 POU2F1P14859 743 aa14.1□□□□□ -0.15
XRCC3-211ENST00000555055 CD36P16671 472 aa14.1□□□□□ -0.15
XRCC3-211ENST00000555055 CD72P21854 359 aa14.1□□□□□ -0.15
XRCC3-211ENST00000555055 RCVRNP35243 200 aa14.1□□□□□ -0.15
XRCC3-211ENST00000555055 IGFALSP35858 605 aa14.1□□□□□ -0.15
XRCC3-211ENST00000555055 PRIM2P49643 509 aa14.1□□□□□ -0.15
XRCC3-211ENST00000555055 MAPK12P53778 367 aa14.1□□□□□ -0.15
XRCC3-211ENST00000555055 SNRPNP63162 240 aaKnown RBP14.1□□□□□ -0.15
XRCC3-211ENST00000555055 SLC13A2Q13183 592 aa14.1□□□□□ -0.15
XRCC3-211ENST00000555055 KRT33BQ14525 404 aa14.1□□□□□ -0.15
XRCC3-211ENST00000555055 GANABQ14697 944 aaKnown RBP14.1□□□□□ -0.15
XRCC3-211ENST00000555055 PROX2Q3B8N5 592 aa14.1□□□□□ -0.15
XRCC3-211ENST00000555055 C6orf183Q5T699 404 aa14.1□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms