RNA–Protein interactions for RNA: ENST00000554390.5

PPP4R3A-202, Transcript of protein phosphatase 4 regulatory subunit 3A, humanhuman

TSL 1 (best)

Gene PPP4R3A, Length 2,953 nt, Biotype non stop decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3A-202ENST00000554390 PPIL3Q9H2H8 161 aaKnown RBP16.15■□□□□ 0.18
PPP4R3A-202ENST00000554390 TXNL4BQ9NX01 149 aaKnown RBP16.15■□□□□ 0.18
PPP4R3A-202ENST00000554390 NDUFB11Q9NX14 153 aa16.15■□□□□ 0.18
PPP4R3A-202ENST00000554390 MALT1Q9UDY8 824 aa16.15■□□□□ 0.18
PPP4R3A-202ENST00000554390 EOMESO95936 686 aa16.14■□□□□ 0.17
PPP4R3A-202ENST00000554390 CSNK1DP48730 415 aa16.14■□□□□ 0.17
PPP4R3A-202ENST00000554390 CLDN20P56880 219 aa16.14■□□□□ 0.17
PPP4R3A-202ENST00000554390 RAB25P57735 213 aa16.14■□□□□ 0.17
PPP4R3A-202ENST00000554390 PTSQ03393 145 aa16.14■□□□□ 0.17
PPP4R3A-202ENST00000554390 DBPQ10586 325 aaPredicted RBP16.14■□□□□ 0.17
PPP4R3A-202ENST00000554390 MFSD13AQ14CX5 517 aa16.14■□□□□ 0.17
PPP4R3A-202ENST00000554390 C22orf42Q6IC83 251 aa16.14■□□□□ 0.17
PPP4R3A-202ENST00000554390 MZT2BQ6NZ67 158 aa16.14■□□□□ 0.17
PPP4R3A-202ENST00000554390 TIGD4Q8IY51 512 aa16.14■□□□□ 0.17
PPP4R3A-202ENST00000554390 DUSP26Q9BV47 211 aa16.14■□□□□ 0.17
PPP4R3A-202ENST00000554390 SLC29A3Q9BZD2 475 aa16.14■□□□□ 0.17
PPP4R3A-202ENST00000554390 C11orf16Q9NQ32 467 aa16.14■□□□□ 0.17
PPP4R3A-202ENST00000554390 UCKL1Q9NWZ5 548 aa16.14■□□□□ 0.17
PPP4R3A-202ENST00000554390 ELF5Q9UKW6 265 aaPredicted RBP16.14■□□□□ 0.17
PPP4R3A-202ENST00000554390 LRFN2Q9ULH4 789 aa16.14■□□□□ 0.17
PPP4R3A-202ENST00000554390 TMCC3Q9ULS5 477 aa16.14■□□□□ 0.17
PPP4R3A-202ENST00000554390 KCNE2Q9Y6J6 123 aa16.14■□□□□ 0.17
PPP4R3A-202ENST00000554390 TPST2O60704 377 aa16.14■□□□□ 0.17
PPP4R3A-202ENST00000554390 PSMA3P25788 255 aa16.14■□□□□ 0.17
PPP4R3A-202ENST00000554390 PTGER1P34995 402 aa16.14■□□□□ 0.17
PPP4R3A-202ENST00000554390 DOC2AQ14183 400 aa16.14■□□□□ 0.17
PPP4R3A-202ENST00000554390 TMEM65Q6PI78 240 aa16.14■□□□□ 0.17
PPP4R3A-202ENST00000554390 PAQR6Q6TCH4 344 aa16.14■□□□□ 0.17
PPP4R3A-202ENST00000554390 MSANTD1Q6ZTZ1 278 aa16.14■□□□□ 0.17
PPP4R3A-202ENST00000554390 PHC2Q8IXK0 858 aa16.14■□□□□ 0.17
PPP4R3A-202ENST00000554390 Q8N402 240 aa16.14■□□□□ 0.17
PPP4R3A-202ENST00000554390 SLC37A3Q8NCC5 494 aa16.14■□□□□ 0.17
PPP4R3A-202ENST00000554390 NFKBIDQ8NI38 313 aa16.14■□□□□ 0.17
PPP4R3A-202ENST00000554390 ZC3HAV1LQ96H79 300 aaKnown RBP16.14■□□□□ 0.17
PPP4R3A-202ENST00000554390 FAM129BQ96TA1 746 aa16.14■□□□□ 0.17
PPP4R3A-202ENST00000554390 SORBS1Q9BX66 1292 aaKnown RBP16.14■□□□□ 0.17
PPP4R3A-202ENST00000554390 GPATCH2Q9NW75 528 aa16.14■□□□□ 0.17
PPP4R3A-202ENST00000554390 MYO10Q9HD67 2058 aa16.14■□□□□ 0.17
PPP4R3A-202ENST00000554390 LOC102723532A0A0G2JNH3 316 aa16.14■□□□□ 0.17
PPP4R3A-202ENST00000554390 TMEM189-UBE2V1I3L0A0 370 aa16.14■□□□□ 0.17
PPP4R3A-202ENST00000554390 LGI1O95970 557 aa16.14■□□□□ 0.17
PPP4R3A-202ENST00000554390 IL1AP01583 271 aa16.14■□□□□ 0.17
PPP4R3A-202ENST00000554390 ANXA4P09525 319 aaPredicted RBP16.14■□□□□ 0.17
PPP4R3A-202ENST00000554390 FAM157BP0CG42 384 aa16.14■□□□□ 0.17
PPP4R3A-202ENST00000554390 PRKAR1AP10644 381 aa16.14■□□□□ 0.17
PPP4R3A-202ENST00000554390 ACLYP53396 1101 aa16.14■□□□□ 0.17
PPP4R3A-202ENST00000554390 SNTA1Q13424 505 aa16.14■□□□□ 0.17
PPP4R3A-202ENST00000554390 CDKN3Q16667 212 aa16.14■□□□□ 0.17
PPP4R3A-202ENST00000554390 FLYWCH1Q4VC44 716 aa16.14■□□□□ 0.17
PPP4R3A-202ENST00000554390 ANKRD54Q6NXT1 300 aa16.14■□□□□ 0.17
PPP4R3A-202ENST00000554390 TEX261Q6UWH6 196 aa16.14■□□□□ 0.17
PPP4R3A-202ENST00000554390 IFNL1Q8IU54 200 aa16.14■□□□□ 0.17
PPP4R3A-202ENST00000554390 CMTM8Q8IZV2 173 aa16.14■□□□□ 0.17
PPP4R3A-202ENST00000554390 KIAA1143Q96AT1 154 aaPredicted RBP16.14■□□□□ 0.17
PPP4R3A-202ENST00000554390 MAGEB10Q96LZ2 347 aaPredicted RBP16.14■□□□□ 0.17
PPP4R3A-202ENST00000554390 U3KQ87 197 aa16.14■□□□□ 0.17
PPP4R3A-202ENST00000554390 FABP7O15540 132 aa16.13■□□□□ 0.17
PPP4R3A-202ENST00000554390 LYRM1O43325 122 aa16.13■□□□□ 0.17
PPP4R3A-202ENST00000554390 PLOD3O60568 738 aa16.13■□□□□ 0.17
PPP4R3A-202ENST00000554390 RFPL3O75679 317 aa16.13■□□□□ 0.17
PPP4R3A-202ENST00000554390 IGHA2P01877 340 aa16.13■□□□□ 0.17
PPP4R3A-202ENST00000554390 PIPP12273 146 aaPredicted RBP16.13■□□□□ 0.17
PPP4R3A-202ENST00000554390 MAPK1P28482 360 aa16.13■□□□□ 0.17
PPP4R3A-202ENST00000554390 PFN3P60673 137 aa16.13■□□□□ 0.17
PPP4R3A-202ENST00000554390 RGS1Q08116 209 aa16.13■□□□□ 0.17
PPP4R3A-202ENST00000554390 LRRC74AQ0VAA2 488 aa16.13■□□□□ 0.17
PPP4R3A-202ENST00000554390 HSDL2Q6YN16 418 aa16.13■□□□□ 0.17
PPP4R3A-202ENST00000554390 CLDN22Q8N7P3 220 aa16.13■□□□□ 0.17
PPP4R3A-202ENST00000554390 CHST14Q8NCH0 376 aa16.13■□□□□ 0.17
PPP4R3A-202ENST00000554390 ZNF680Q8NEM1 530 aa16.13■□□□□ 0.17
PPP4R3A-202ENST00000554390 MTERF3Q96E29 417 aa16.13■□□□□ 0.17
PPP4R3A-202ENST00000554390 OTUB1Q96FW1 271 aaPredicted RBP16.13■□□□□ 0.17
PPP4R3A-202ENST00000554390 CMTM7Q96FZ5 175 aa16.13■□□□□ 0.17
PPP4R3A-202ENST00000554390 HTATIP2Q9BUP3 242 aa16.13■□□□□ 0.17
PPP4R3A-202ENST00000554390 VN1R3Q9BXE9 311 aa16.13■□□□□ 0.17
PPP4R3A-202ENST00000554390 PCDHB11Q9Y5F2 797 aa16.13■□□□□ 0.17
PPP4R3A-202ENST00000554390 OR51B4Q9Y5P0 310 aa16.13■□□□□ 0.17
PPP4R3A-202ENST00000554390 AUP1Q9Y679 476 aa16.13■□□□□ 0.17
PPP4R3A-202ENST00000554390 MPZL2O60487 215 aa16.13■□□□□ 0.17
PPP4R3A-202ENST00000554390 ZNF821O75541 412 aaPredicted RBP16.13■□□□□ 0.17
PPP4R3A-202ENST00000554390 SDC2P34741 201 aa16.13■□□□□ 0.17
PPP4R3A-202ENST00000554390 ABATP80404 500 aa16.13■□□□□ 0.17
PPP4R3A-202ENST00000554390 LMAN2Q12907 356 aa16.13■□□□□ 0.17
PPP4R3A-202ENST00000554390 ZNF782Q6ZMW2 699 aaPredicted RBP16.13■□□□□ 0.17
PPP4R3A-202ENST00000554390 CDH24Q86UP0 819 aa16.13■□□□□ 0.17
PPP4R3A-202ENST00000554390 GPR65Q8IYL9 337 aa16.13■□□□□ 0.17
PPP4R3A-202ENST00000554390 GALNT11Q8NCW6 608 aa16.13■□□□□ 0.17
PPP4R3A-202ENST00000554390 OR4A15Q8NGL6 344 aa16.13■□□□□ 0.17
PPP4R3A-202ENST00000554390 ALG14Q96F25 216 aa16.13■□□□□ 0.17
PPP4R3A-202ENST00000554390 PKP4Q99569 1192 aa16.13■□□□□ 0.17
PPP4R3A-202ENST00000554390 MARVELD1Q9BSK0 173 aa16.13■□□□□ 0.17
PPP4R3A-202ENST00000554390 KLF16Q9BXK1 252 aaPredicted RBP16.13■□□□□ 0.17
PPP4R3A-202ENST00000554390 XRN2Q9H0D6 950 aaKnown RBP eCLIP16.13■□□□□ 0.17
PPP4R3A-202ENST00000554390 ANKRA2Q9H9E1 313 aa16.13■□□□□ 0.17
PPP4R3A-202ENST00000554390 SLC25A19Q9HC21 320 aa16.13■□□□□ 0.17
PPP4R3A-202ENST00000554390 KCTD5Q9NXV2 234 aa16.13■□□□□ 0.17
PPP4R3A-202ENST00000554390 DNAJC27Q9NZQ0 273 aa16.13■□□□□ 0.17
PPP4R3A-202ENST00000554390 VPS29Q9UBQ0 182 aa16.13■□□□□ 0.17
PPP4R3A-202ENST00000554390 STOML2Q9UJZ1 356 aa16.13■□□□□ 0.17
PPP4R3A-202ENST00000554390 RWDD3Q9Y3V2 267 aa16.13■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms