RNA–Protein interactions for RNA: ENST00000554079.1

SIX4-202, Transcript of SIX homeobox 4, humanhuman

TSL 1 (best)

Gene SIX4, Length 2,003 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4-202ENST00000554079 METTL17Q9H7H0 456 aaPredicted RBP9.12□□□□□ -0.95
SIX4-202ENST00000554079 SEMA4BQ9NPR2 832 aaPredicted RBP9.12□□□□□ -0.95
SIX4-202ENST00000554079 C11orf16Q9NQ32 467 aa9.12□□□□□ -0.95
SIX4-202ENST00000554079 SLC6A13Q9NSD5 602 aa9.12□□□□□ -0.95
SIX4-202ENST00000554079 UBP1Q9NZI7 540 aa9.12□□□□□ -0.95
SIX4-202ENST00000554079 NDUFAF4Q9P032 175 aa9.12□□□□□ -0.95
SIX4-202ENST00000554079 CLEC2DQ9UHP7 191 aa9.12□□□□□ -0.95
SIX4-202ENST00000554079 MRTO4Q9UKD2 239 aaKnown RBP9.12□□□□□ -0.95
SIX4-202ENST00000554079 ATXN7L1Q9ULK2 861 aaPredicted RBP9.12□□□□□ -0.95
SIX4-202ENST00000554079 FZD10Q9ULW2 581 aa9.12□□□□□ -0.95
SIX4-202ENST00000554079 PIAS3Q9Y6X2 628 aa9.12□□□□□ -0.95
SIX4-202ENST00000554079 LOC285095A0A1B0GVY8 99 aa9.12□□□□□ -0.95
SIX4-202ENST00000554079 C9orf170A2RU37 121 aa9.12□□□□□ -0.95
SIX4-202ENST00000554079 OR6C68A6NDL8 312 aa9.12□□□□□ -0.95
SIX4-202ENST00000554079 SLC9B1P1A6NJY1 282 aa9.12□□□□□ -0.95
SIX4-202ENST00000554079 STMND1H3BQB6 276 aa9.12□□□□□ -0.95
SIX4-202ENST00000554079 DCLK1O15075 740 aa9.12□□□□□ -0.95
SIX4-202ENST00000554079 SLC7A4O43246 635 aa9.12□□□□□ -0.95
SIX4-202ENST00000554079 DGAT1O75907 488 aa9.12□□□□□ -0.95
SIX4-202ENST00000554079 EGFP01133 1207 aa9.12□□□□□ -0.95
SIX4-202ENST00000554079 HOXC6P09630 235 aa9.12□□□□□ -0.95
SIX4-202ENST00000554079 HOXB8P17481 243 aaPredicted RBP9.12□□□□□ -0.95
SIX4-202ENST00000554079 MST1P26927 711 aa9.12□□□□□ -0.95
SIX4-202ENST00000554079 LAP3P28838 519 aa9.12□□□□□ -0.95
SIX4-202ENST00000554079 JAK3P52333 1124 aa9.12□□□□□ -0.95
SIX4-202ENST00000554079 CAV3P56539 151 aa9.12□□□□□ -0.95
SIX4-202ENST00000554079 DCDP81605 110 aaKnown RBP9.12□□□□□ -0.95
SIX4-202ENST00000554079 PURAQ00577 322 aaKnown RBP9.12□□□□□ -0.95
SIX4-202ENST00000554079 TNFRSF17Q02223 184 aa9.12□□□□□ -0.95
SIX4-202ENST00000554079 CHAF1BQ13112 559 aa9.12□□□□□ -0.95
SIX4-202ENST00000554079 HABP2Q14520 560 aaPredicted RBP9.12□□□□□ -0.95
SIX4-202ENST00000554079 PON3Q15166 354 aa9.12□□□□□ -0.95
SIX4-202ENST00000554079 SPHARQ15513 63 aa9.12□□□□□ -0.95
SIX4-202ENST00000554079 GSG1Q2KHT4 349 aa9.12□□□□□ -0.95
SIX4-202ENST00000554079 RNF212Q495C1 297 aa9.12□□□□□ -0.95
SIX4-202ENST00000554079 MPPE1Q53F39 396 aa9.12□□□□□ -0.95
SIX4-202ENST00000554079 PDE12Q6L8Q7 609 aaKnown RBP9.12□□□□□ -0.95
SIX4-202ENST00000554079 LCLAT1Q6UWP7 414 aa9.12□□□□□ -0.95
SIX4-202ENST00000554079 SLC9B2Q86UD5 537 aa9.12□□□□□ -0.95
SIX4-202ENST00000554079 PIM3Q86V86 326 aa9.12□□□□□ -0.95
SIX4-202ENST00000554079 CRYBG2Q8N1P7 616 aa9.12□□□□□ -0.95
SIX4-202ENST00000554079 SYT14Q8NB59 555 aa9.12□□□□□ -0.95
SIX4-202ENST00000554079 OR5M9Q8NGP3 310 aa9.12□□□□□ -0.95
SIX4-202ENST00000554079 OR52P1PQ8NH57 321 aa9.12□□□□□ -0.95
SIX4-202ENST00000554079 FATE1Q969F0 183 aa9.12□□□□□ -0.95
SIX4-202ENST00000554079 PABPC5Q96DU9 382 aaKnown RBP9.12□□□□□ -0.95
SIX4-202ENST00000554079 FAM120BQ96EK7 910 aaKnown RBP9.12□□□□□ -0.95
SIX4-202ENST00000554079 PFDN5Q99471 154 aa9.12□□□□□ -0.95
SIX4-202ENST00000554079 NEU1Q99519 415 aa9.12□□□□□ -0.95
SIX4-202ENST00000554079 SPSB2Q99619 263 aa9.12□□□□□ -0.95
SIX4-202ENST00000554079 MAP3K3Q99759 626 aa9.12□□□□□ -0.95
SIX4-202ENST00000554079 ATF6BQ99941 703 aa9.12□□□□□ -0.95
SIX4-202ENST00000554079 ZYG11BQ9C0D3 744 aa9.12□□□□□ -0.95
SIX4-202ENST00000554079 SAP130Q9H0E3 1048 aa9.12□□□□□ -0.95
SIX4-202ENST00000554079 DPAGT1Q9H3H5 408 aa9.12□□□□□ -0.95
SIX4-202ENST00000554079 NSUN3Q9H649 340 aaKnown RBP9.12□□□□□ -0.95
SIX4-202ENST00000554079 PTCH2Q9Y6C5 1203 aa9.12□□□□□ -0.95
SIX4-202ENST00000554079 RALGAPA2Q2PPJ7 1873 aa9.12□□□□□ -0.95
SIX4-202ENST00000554079 MEX3AA1L020 520 aaKnown RBP9.11□□□□□ -0.95
SIX4-202ENST00000554079 MCRIP1C9JLW8 97 aa9.11□□□□□ -0.95
SIX4-202ENST00000554079 J3KR12 359 aa9.11□□□□□ -0.95
SIX4-202ENST00000554079 GPR31O00270 319 aa9.11□□□□□ -0.95
SIX4-202ENST00000554079 GLP2RO95838 553 aa9.11□□□□□ -0.95
SIX4-202ENST00000554079 TCRBP04435 133 aa9.11□□□□□ -0.95
SIX4-202ENST00000554079 ZDHHC11BP0C7U3 371 aa9.11□□□□□ -0.95
SIX4-202ENST00000554079 APEHP13798 732 aaKnown RBP9.11□□□□□ -0.95
SIX4-202ENST00000554079 GABRA1P14867 456 aa9.11□□□□□ -0.95
SIX4-202ENST00000554079 BPIP17213 487 aa9.11□□□□□ -0.95
SIX4-202ENST00000554079 HOXB9P17482 250 aaPredicted RBP9.11□□□□□ -0.95
SIX4-202ENST00000554079 CRKLP46109 303 aaKnown RBP9.11□□□□□ -0.95
SIX4-202ENST00000554079 AVPR1BP47901 424 aa9.11□□□□□ -0.95
SIX4-202ENST00000554079 DEFA6Q01524 100 aa9.11□□□□□ -0.95
SIX4-202ENST00000554079 IL10RBQ08334 325 aa9.11□□□□□ -0.95
SIX4-202ENST00000554079 RBBP4Q09028 425 aa9.11□□□□□ -0.95
SIX4-202ENST00000554079 ZNF155Q12901 538 aaPredicted RBP9.11□□□□□ -0.95
SIX4-202ENST00000554079 CCDC85BQ15834 202 aaPredicted RBP9.11□□□□□ -0.95
SIX4-202ENST00000554079 NTRK2Q16620 822 aa9.11□□□□□ -0.95
SIX4-202ENST00000554079 LIPKQ5VXJ0 399 aa9.11□□□□□ -0.95
SIX4-202ENST00000554079 ZNF551Q7Z340 670 aaPredicted RBP9.11□□□□□ -0.95
SIX4-202ENST00000554079 VTCN1Q7Z7D3 282 aa9.11□□□□□ -0.95
SIX4-202ENST00000554079 KLBQ86Z14 1044 aa9.11□□□□□ -0.95
SIX4-202ENST00000554079 RNF113BQ8IZP6 322 aaKnown RBP9.11□□□□□ -0.95
SIX4-202ENST00000554079 TRPV1Q8NER1 839 aa9.11□□□□□ -0.95
SIX4-202ENST00000554079 PPHLN1Q8NEY8 458 aaKnown RBP9.11□□□□□ -0.95
SIX4-202ENST00000554079 OR52K2Q8NGK3 314 aa9.11□□□□□ -0.95
SIX4-202ENST00000554079 OR4A15Q8NGL6 344 aa9.11□□□□□ -0.95
SIX4-202ENST00000554079 RXFP4Q8TDU9 374 aa9.11□□□□□ -0.95
SIX4-202ENST00000554079 NR4A3Q92570 626 aa9.11□□□□□ -0.95
SIX4-202ENST00000554079 NELL2Q99435 816 aa9.11□□□□□ -0.95
SIX4-202ENST00000554079 GSDMCQ9BYG8 508 aa9.11□□□□□ -0.95
SIX4-202ENST00000554079 HDHD2Q9H0R4 259 aa9.11□□□□□ -0.95
SIX4-202ENST00000554079 QRSL1Q9H0R6 528 aaKnown RBP9.11□□□□□ -0.95
SIX4-202ENST00000554079 ABCG5Q9H222 651 aa9.11□□□□□ -0.95
SIX4-202ENST00000554079 C11orf49Q9H6J7 331 aa9.11□□□□□ -0.95
SIX4-202ENST00000554079 SLC25A19Q9HC21 320 aa9.11□□□□□ -0.95
SIX4-202ENST00000554079 FZD3Q9NPG1 666 aa9.11□□□□□ -0.95
SIX4-202ENST00000554079 TREM2Q9NZC2 230 aa9.11□□□□□ -0.95
SIX4-202ENST00000554079 CFAP97Q9P2B7 532 aa9.11□□□□□ -0.95
SIX4-202ENST00000554079 TSPAN16Q9UKR8 245 aa9.11□□□□□ -0.95
SIX4-202ENST00000554079 POLR3HQ9Y535 204 aaPredicted RBP9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms