RNA–Protein interactions for RNA: ENST00000553998.5

ABCD4-220, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 3

Gene ABCD4, Length 478 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-220ENST00000553998 RNFT1Q5M7Z0 435 aa7.23□□□□□ -1.25
ABCD4-220ENST00000553998 PRAMEF9Q5VWM5 478 aa7.23□□□□□ -1.25
ABCD4-220ENST00000553998 TMEM211Q6ICI0 200 aa7.23□□□□□ -1.25
ABCD4-220ENST00000553998 SPINK14Q6IE38 97 aa7.23□□□□□ -1.25
ABCD4-220ENST00000553998 SLC25A25Q6KCM7 469 aa7.23□□□□□ -1.25
ABCD4-220ENST00000553998 MED27Q6P2C8 311 aa7.23□□□□□ -1.25
ABCD4-220ENST00000553998 TMIGD1Q6UXZ0 262 aa7.23□□□□□ -1.25
ABCD4-220ENST00000553998 FRMD7Q6ZUT3 714 aa7.23□□□□□ -1.25
ABCD4-220ENST00000553998 GPRIN3Q6ZVF9 776 aa7.23□□□□□ -1.25
ABCD4-220ENST00000553998 VN1R4Q7Z5H5 301 aa7.23□□□□□ -1.25
ABCD4-220ENST00000553998 CPEB2Q7Z5Q1 589 aaKnown RBP7.23□□□□□ -1.25
ABCD4-220ENST00000553998 MILR1Q7Z6M3 343 aa7.23□□□□□ -1.25
ABCD4-220ENST00000553998 ASPGQ86U10 573 aa7.23□□□□□ -1.25
ABCD4-220ENST00000553998 C10orf107Q8IVU9 208 aa7.23□□□□□ -1.25
ABCD4-220ENST00000553998 ZC3H7AQ8IWR0 971 aaKnown RBP7.23□□□□□ -1.25
ABCD4-220ENST00000553998 LAS2Q8IYD9 372 aa7.23□□□□□ -1.25
ABCD4-220ENST00000553998 LGI4Q8N135 537 aa7.23□□□□□ -1.25
ABCD4-220ENST00000553998 HORMAD2Q8N7B1 307 aa7.23□□□□□ -1.25
ABCD4-220ENST00000553998 CCNYL1Q8N7R7 359 aa7.23□□□□□ -1.25
ABCD4-220ENST00000553998 FAM57AQ8TBR7 257 aa7.23□□□□□ -1.25
ABCD4-220ENST00000553998 M1APQ8TC57 530 aa7.23□□□□□ -1.25
ABCD4-220ENST00000553998 NT5CQ8TCD5 201 aa7.23□□□□□ -1.25
ABCD4-220ENST00000553998 TRPC4APQ8TEL6 797 aa7.23□□□□□ -1.25
ABCD4-220ENST00000553998 SLC13A3Q8WWT9 602 aa7.23□□□□□ -1.25
ABCD4-220ENST00000553998 NSUN5Q96P11 429 aaKnown RBP7.23□□□□□ -1.25
ABCD4-220ENST00000553998 ZNF559Q9BR84 538 aa7.23□□□□□ -1.25
ABCD4-220ENST00000553998 UTP23Q9BRU9 249 aaKnown RBP7.23□□□□□ -1.25
ABCD4-220ENST00000553998 GATA5Q9BWX5 397 aaPredicted RBP7.23□□□□□ -1.25
ABCD4-220ENST00000553998 HES7Q9BYE0 225 aa7.23□□□□□ -1.25
ABCD4-220ENST00000553998 RHBGQ9H310 441 aa7.23□□□□□ -1.25
ABCD4-220ENST00000553998 GSTO2Q9H4Y5 243 aa7.23□□□□□ -1.25
ABCD4-220ENST00000553998 SYNPO2LQ9H987 977 aa7.23□□□□□ -1.25
ABCD4-220ENST00000553998 MMP25Q9NPA2 562 aa7.23□□□□□ -1.25
ABCD4-220ENST00000553998 KCNJ16Q9NPI9 418 aa7.23□□□□□ -1.25
ABCD4-220ENST00000553998 MED4Q9NPJ6 270 aa7.23□□□□□ -1.25
ABCD4-220ENST00000553998 SEMA4BQ9NPR2 832 aaPredicted RBP7.23□□□□□ -1.25
ABCD4-220ENST00000553998 PLSCR2Q9NRY7 297 aa7.23□□□□□ -1.25
ABCD4-220ENST00000553998 CCM2LQ9NUG4 571 aaPredicted RBP7.23□□□□□ -1.25
ABCD4-220ENST00000553998 PSD3Q9NYI0 1048 aa7.23□□□□□ -1.25
ABCD4-220ENST00000553998 TRPS1Q9UHF7 1281 aa7.23□□□□□ -1.25
ABCD4-220ENST00000553998 RUVBL1Q9Y265 456 aaKnown RBP7.23□□□□□ -1.25
ABCD4-220ENST00000553998 SCN3AQ9NY46 2000 aa7.23□□□□□ -1.25
ABCD4-220ENST00000553998 PRRC2AP48634 2157 aaKnown RBP7.23□□□□□ -1.25
ABCD4-220ENST00000553998 FEZF1A0PJY2 475 aa7.22□□□□□ -1.25
ABCD4-220ENST00000553998 URADA6NGE7 173 aa7.22□□□□□ -1.25
ABCD4-220ENST00000553998 ANKDD1BA6NHY2 528 aa7.22□□□□□ -1.25
ABCD4-220ENST00000553998 A8MUI8 341 aa7.22□□□□□ -1.25
ABCD4-220ENST00000553998 H0YIV9 168 aa7.22□□□□□ -1.25
ABCD4-220ENST00000553998 OR7A17O14581 309 aa7.22□□□□□ -1.25
ABCD4-220ENST00000553998 LCMT2O60294 686 aaKnown RBP7.22□□□□□ -1.25
ABCD4-220ENST00000553998 NRP2O60462 931 aa7.22□□□□□ -1.25
ABCD4-220ENST00000553998 CLEC3AO75596 197 aa7.22□□□□□ -1.25
ABCD4-220ENST00000553998 CTAG2O75638 210 aa7.22□□□□□ -1.25
ABCD4-220ENST00000553998 ESRRBO95718 433 aa7.22□□□□□ -1.25
ABCD4-220ENST00000553998 SERPINE1P05121 402 aa7.22□□□□□ -1.25
ABCD4-220ENST00000553998 EIF2S1P05198 315 aaKnown RBP7.22□□□□□ -1.25
ABCD4-220ENST00000553998 ENO1P06733 434 aaKnown RBP7.22□□□□□ -1.25
ABCD4-220ENST00000553998 SERPINA6P08185 405 aa7.22□□□□□ -1.25
ABCD4-220ENST00000553998 GRK2P25098 689 aa7.22□□□□□ -1.25
ABCD4-220ENST00000553998 PIK3CBP42338 1070 aa7.22□□□□□ -1.25
ABCD4-220ENST00000553998 CDH13P55290 713 aa7.22□□□□□ -1.25
ABCD4-220ENST00000553998 STXBP1P61764 594 aaKnown RBP7.22□□□□□ -1.25
ABCD4-220ENST00000553998 PHEXP78562 749 aa7.22□□□□□ -1.25
ABCD4-220ENST00000553998 HSF1Q00613 529 aa7.22□□□□□ -1.25
ABCD4-220ENST00000553998 MEF2AQ02078 507 aaPredicted RBP7.22□□□□□ -1.25
ABCD4-220ENST00000553998 RGS1Q08116 209 aa7.22□□□□□ -1.25
ABCD4-220ENST00000553998 EXT1Q16394 746 aa7.22□□□□□ -1.25
ABCD4-220ENST00000553998 HHATQ5VTY9 493 aa7.22□□□□□ -1.25
ABCD4-220ENST00000553998 NIPAL1Q6NVV3 410 aa7.22□□□□□ -1.25
ABCD4-220ENST00000553998 C3P1Q6ZMU1 363 aa7.22□□□□□ -1.25
ABCD4-220ENST00000553998 GALNTL5Q7Z4T8 443 aa7.22□□□□□ -1.25
ABCD4-220ENST00000553998 PNPLA5Q7Z6Z6 429 aaPredicted RBP7.22□□□□□ -1.25
ABCD4-220ENST00000553998 BIVMQ86UB2 503 aa7.22□□□□□ -1.25
ABCD4-220ENST00000553998 ZNF227Q86WZ6 799 aa7.22□□□□□ -1.25
ABCD4-220ENST00000553998 MYLK4Q86YV6 388 aaPredicted RBP7.22□□□□□ -1.25
ABCD4-220ENST00000553998 CRLF3Q8IUI8 442 aa7.22□□□□□ -1.25
ABCD4-220ENST00000553998 PLD3Q8IV08 490 aa7.22□□□□□ -1.25
ABCD4-220ENST00000553998 NUDCD3Q8IVD9 361 aa7.22□□□□□ -1.25
ABCD4-220ENST00000553998 TRIM42Q8IWZ5 723 aa7.22□□□□□ -1.25
ABCD4-220ENST00000553998 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP7.22□□□□□ -1.25
ABCD4-220ENST00000553998 KIRREL3Q8IZU9 778 aa7.22□□□□□ -1.25
ABCD4-220ENST00000553998 ANKRD42Q8N9B4 389 aa7.22□□□□□ -1.25
ABCD4-220ENST00000553998 ANKRD53Q8N9V6 530 aa7.22□□□□□ -1.25
ABCD4-220ENST00000553998 POGLUT1Q8NBL1 392 aa7.22□□□□□ -1.25
ABCD4-220ENST00000553998 FAM98AQ8NCA5 519 aaKnown RBP7.22□□□□□ -1.25
ABCD4-220ENST00000553998 ZNF740Q8NDX6 193 aa7.22□□□□□ -1.25
ABCD4-220ENST00000553998 OR7G3Q8NG95 312 aa7.22□□□□□ -1.25
ABCD4-220ENST00000553998 OR52B6Q8NGF0 335 aa7.22□□□□□ -1.25
ABCD4-220ENST00000553998 OR6Y1Q8NGX8 325 aa7.22□□□□□ -1.25
ABCD4-220ENST00000553998 PPP1R14CQ8TAE6 165 aa7.22□□□□□ -1.25
ABCD4-220ENST00000553998 RAB3IL1Q8TBN0 382 aa7.22□□□□□ -1.25
ABCD4-220ENST00000553998 CREB3L4Q8TEY5 395 aa7.22□□□□□ -1.25
ABCD4-220ENST00000553998 METTL21AQ8WXB1 218 aa7.22□□□□□ -1.25
ABCD4-220ENST00000553998 NRGNQ92686 78 aa7.22□□□□□ -1.25
ABCD4-220ENST00000553998 MBD6Q96DN6 1003 aa7.22□□□□□ -1.25
ABCD4-220ENST00000553998 TM4SF19Q96DZ7 209 aa7.22□□□□□ -1.25
ABCD4-220ENST00000553998 MMABQ96EY8 250 aaPredicted RBP7.22□□□□□ -1.25
ABCD4-220ENST00000553998 ALPK1Q96QP1 1244 aa7.22□□□□□ -1.25
ABCD4-220ENST00000553998 UCK2Q9BZX2 261 aa7.22□□□□□ -1.25
ABCD4-220ENST00000553998 SLC6A16Q9GZN6 736 aa7.22□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms