RNA–Protein interactions for RNA: ENST00000553846.1

PRKCH-208, Transcript of protein kinase C eta, humanhuman

TSL 4

Gene PRKCH, Length 557 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-208ENST00000553846 PPP1R3AQ16821 1122 aa8.28□□□□□ -1.08
PRKCH-208ENST00000553846 KCTD19Q17RG1 926 aaPredicted RBP8.28□□□□□ -1.08
PRKCH-208ENST00000553846 KRTAP24-1Q3LI83 254 aa8.28□□□□□ -1.08
PRKCH-208ENST00000553846 LRRC8EQ6NSJ5 796 aa8.28□□□□□ -1.08
PRKCH-208ENST00000553846 PODNL1Q6PEZ8 512 aa8.28□□□□□ -1.08
PRKCH-208ENST00000553846 C22orf34Q6ZV56 151 aa8.28□□□□□ -1.08
PRKCH-208ENST00000553846 SYDE1Q6ZW31 735 aaPredicted RBP8.28□□□□□ -1.08
PRKCH-208ENST00000553846 CAND1Q86VP6 1230 aaKnown RBP8.28□□□□□ -1.08
PRKCH-208ENST00000553846 ZNF441Q8N8Z8 693 aa8.28□□□□□ -1.08
PRKCH-208ENST00000553846 C1orf54Q8WWF1 131 aa8.28□□□□□ -1.08
PRKCH-208ENST00000553846 SLC44A1Q8WWI5 657 aa8.28□□□□□ -1.08
PRKCH-208ENST00000553846 ANKRD9Q96BM1 317 aaPredicted RBP8.28□□□□□ -1.08
PRKCH-208ENST00000553846 TSNARE1Q96NA8 513 aa8.28□□□□□ -1.08
PRKCH-208ENST00000553846 CNIH4Q9P003 139 aa8.28□□□□□ -1.08
PRKCH-208ENST00000553846 CLCF1Q9UBD9 225 aa8.28□□□□□ -1.08
PRKCH-208ENST00000553846 FETUBQ9UGM5 382 aa8.28□□□□□ -1.08
PRKCH-208ENST00000553846 AMFRQ9UKV5 643 aa8.28□□□□□ -1.08
PRKCH-208ENST00000553846 DAPP1Q9UN19 280 aa8.28□□□□□ -1.08
PRKCH-208ENST00000553846 ZNF148Q9UQR1 794 aa8.28□□□□□ -1.08
PRKCH-208ENST00000553846 C15orf41Q9Y2V0 281 aa8.28□□□□□ -1.08
PRKCH-208ENST00000553846 COMMD10Q9Y6G5 202 aa8.28□□□□□ -1.08
PRKCH-208ENST00000553846 A0A087X1B8 175 aa8.27□□□□□ -1.09
PRKCH-208ENST00000553846 URADA6NGE7 173 aa8.27□□□□□ -1.09
PRKCH-208ENST00000553846 C17orf105B2RV13 164 aa8.27□□□□□ -1.09
PRKCH-208ENST00000553846 GOLGA6L19H0YKK7 550 aa8.27□□□□□ -1.09
PRKCH-208ENST00000553846 AP3B1O00203 1094 aa8.27□□□□□ -1.09
PRKCH-208ENST00000553846 HAUS5O94927 633 aa8.27□□□□□ -1.09
PRKCH-208ENST00000553846 RCBTB2O95199 551 aa8.27□□□□□ -1.09
PRKCH-208ENST00000553846 FTCDO95954 541 aa8.27□□□□□ -1.09
PRKCH-208ENST00000553846 THBS1P07996 1170 aa8.27□□□□□ -1.09
PRKCH-208ENST00000553846 CERS1P27544 350 aa8.27□□□□□ -1.09
PRKCH-208ENST00000553846 GABRB3P28472 473 aa8.27□□□□□ -1.09
PRKCH-208ENST00000553846 MAGEA3P43357 314 aa8.27□□□□□ -1.09
PRKCH-208ENST00000553846 NAGLUP54802 743 aa8.27□□□□□ -1.09
PRKCH-208ENST00000553846 CDKN2DP55273 166 aa8.27□□□□□ -1.09
PRKCH-208ENST00000553846 AP1S2P56377 157 aa8.27□□□□□ -1.09
PRKCH-208ENST00000553846 CDK16Q00536 496 aa8.27□□□□□ -1.09
PRKCH-208ENST00000553846 TBL3Q12788 808 aaKnown RBP8.27□□□□□ -1.09
PRKCH-208ENST00000553846 BMPR2Q13873 1038 aa8.27□□□□□ -1.09
PRKCH-208ENST00000553846 BICRALQ6AI39 1079 aa8.27□□□□□ -1.09
PRKCH-208ENST00000553846 ADNP2Q6IQ32 1131 aa8.27□□□□□ -1.09
PRKCH-208ENST00000553846 DRICH1Q6PGQ1 229 aaPredicted RBP8.27□□□□□ -1.09
PRKCH-208ENST00000553846 PAQR3Q6TCH7 311 aa8.27□□□□□ -1.09
PRKCH-208ENST00000553846 NXPE4Q6UWF7 544 aa8.27□□□□□ -1.09
PRKCH-208ENST00000553846 SBSNQ6UWP8 590 aa8.27□□□□□ -1.09
PRKCH-208ENST00000553846 DGAT2L6Q6ZPD8 337 aa8.27□□□□□ -1.09
PRKCH-208ENST00000553846 DNM1P46Q6ZS02 220 aa8.27□□□□□ -1.09
PRKCH-208ENST00000553846 UBE3DQ7Z6J8 389 aa8.27□□□□□ -1.09
PRKCH-208ENST00000553846 LUZP2Q86TE4 346 aa8.27□□□□□ -1.09
PRKCH-208ENST00000553846 KLHDC8AQ8IYD2 350 aa8.27□□□□□ -1.09
PRKCH-208ENST00000553846 DND1Q8IYX4 353 aaKnown RBP8.27□□□□□ -1.09
PRKCH-208ENST00000553846 LIX1Q8N485 282 aa8.27□□□□□ -1.09
PRKCH-208ENST00000553846 MEIOBQ8N635 442 aa8.27□□□□□ -1.09
PRKCH-208ENST00000553846 SLC15A4Q8N697 577 aa8.27□□□□□ -1.09
PRKCH-208ENST00000553846 OR5L2Q8NGL0 311 aa8.27□□□□□ -1.09
PRKCH-208ENST00000553846 ZPLD1Q8TCW7 415 aa8.27□□□□□ -1.09
PRKCH-208ENST00000553846 ALKBH8Q96BT7 664 aaKnown RBP8.27□□□□□ -1.09
PRKCH-208ENST00000553846 CTHRC1Q96CG8 243 aa8.27□□□□□ -1.09
PRKCH-208ENST00000553846 ZFP3Q96NJ6 502 aa8.27□□□□□ -1.09
PRKCH-208ENST00000553846 WFIKKN1Q96NZ8 548 aa8.27□□□□□ -1.09
PRKCH-208ENST00000553846 TRIB1Q96RU8 372 aa8.27□□□□□ -1.09
PRKCH-208ENST00000553846 ALOXE3Q9BYJ1 711 aa8.27□□□□□ -1.09
PRKCH-208ENST00000553846 UBTD1Q9HAC8 227 aa8.27□□□□□ -1.09
PRKCH-208ENST00000553846 EIF3LQ9Y262 564 aaKnown RBP8.27□□□□□ -1.09
PRKCH-208ENST00000553846 DTX4Q9Y2E6 619 aa8.27□□□□□ -1.09
PRKCH-208ENST00000553846 SLC6A5Q9Y345 797 aa8.27□□□□□ -1.09
PRKCH-208ENST00000553846 TGP01266 2768 aa8.26□□□□□ -1.09
PRKCH-208ENST00000553846 CES2O00748 559 aa8.26□□□□□ -1.09
PRKCH-208ENST00000553846 ERI3O43414 337 aaKnown RBP8.26□□□□□ -1.09
PRKCH-208ENST00000553846 PRAMEF4O60810 478 aa8.26□□□□□ -1.09
PRKCH-208ENST00000553846 LDB3O75112 727 aa8.26□□□□□ -1.09
PRKCH-208ENST00000553846 ERN1O75460 977 aaKnown RBP8.26□□□□□ -1.09
PRKCH-208ENST00000553846 SCELO95171 688 aa8.26□□□□□ -1.09
PRKCH-208ENST00000553846 CPN1P15169 458 aa8.26□□□□□ -1.09
PRKCH-208ENST00000553846 GDF1P27539 372 aa8.26□□□□□ -1.09
PRKCH-208ENST00000553846 PGGT1BP53609 377 aa8.26□□□□□ -1.09
PRKCH-208ENST00000553846 STXBP1P61764 594 aaKnown RBP8.26□□□□□ -1.09
PRKCH-208ENST00000553846 CSHL1Q14406 222 aa8.26□□□□□ -1.09
PRKCH-208ENST00000553846 EIPR1Q53HC9 387 aa8.26□□□□□ -1.09
PRKCH-208ENST00000553846 RBM20Q5T481 1227 aaKnown RBP8.26□□□□□ -1.09
PRKCH-208ENST00000553846 PRAMEF9Q5VWM5 478 aa8.26□□□□□ -1.09
PRKCH-208ENST00000553846 ANKRD22Q5VYY1 191 aa8.26□□□□□ -1.09
PRKCH-208ENST00000553846 ABHD17CQ6PCB6 329 aa8.26□□□□□ -1.09
PRKCH-208ENST00000553846 PLXDC2Q6UX71 529 aa8.26□□□□□ -1.09
PRKCH-208ENST00000553846 ZNF793Q6ZN11 406 aa8.26□□□□□ -1.09
PRKCH-208ENST00000553846 SLCO4C1Q6ZQN7 724 aa8.26□□□□□ -1.09
PRKCH-208ENST00000553846 PEX26Q7Z412 305 aa8.26□□□□□ -1.09
PRKCH-208ENST00000553846 TMPRSS11BQ86T26 416 aa8.26□□□□□ -1.09
PRKCH-208ENST00000553846 TBC1D19Q8N5T2 526 aa8.26□□□□□ -1.09
PRKCH-208ENST00000553846 UBL4BQ8N7F7 174 aa8.26□□□□□ -1.09
PRKCH-208ENST00000553846 MAPK1IP1LQ8NDC0 245 aa8.26□□□□□ -1.09
PRKCH-208ENST00000553846 LINGO1Q96FE5 620 aa8.26□□□□□ -1.09
PRKCH-208ENST00000553846 SENP5Q96HI0 755 aaPredicted RBP8.26□□□□□ -1.09
PRKCH-208ENST00000553846 FBXL20Q96IG2 436 aa8.26□□□□□ -1.09
PRKCH-208ENST00000553846 ZNF597Q96LX8 424 aa8.26□□□□□ -1.09
PRKCH-208ENST00000553846 SECISBP2Q96T21 854 aaKnown RBP8.26□□□□□ -1.09
PRKCH-208ENST00000553846 NDNQ99608 321 aa8.26□□□□□ -1.09
PRKCH-208ENST00000553846 TUBA1CQ9BQE3 449 aa8.26□□□□□ -1.09
PRKCH-208ENST00000553846 AIF1LQ9BQI0 150 aa8.26□□□□□ -1.09
PRKCH-208ENST00000553846 DOHHQ9BU89 302 aa8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms