RNA–Protein interactions for RNA: ENST00000550283.1

RAB5B-208, Transcript of RAB5B, member RAS oncogene family, humanhuman

TSL 3

Gene RAB5B, Length 665 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5B-208ENST00000550283 BTKQ06187 659 aa10.46□□□□□ -0.73
RAB5B-208ENST00000550283 ACTN3Q08043 901 aaPredicted RBP10.46□□□□□ -0.73
RAB5B-208ENST00000550283 TGM3Q08188 693 aa10.46□□□□□ -0.73
RAB5B-208ENST00000550283 KLRB1Q12918 225 aa10.46□□□□□ -0.73
RAB5B-208ENST00000550283 MFAP5Q13361 173 aa10.46□□□□□ -0.73
RAB5B-208ENST00000550283 AGAP7PQ5VUJ5 663 aa10.46□□□□□ -0.73
RAB5B-208ENST00000550283 Q6ZS92 163 aa10.46□□□□□ -0.73
RAB5B-208ENST00000550283 ZNF227Q86WZ6 799 aa10.46□□□□□ -0.73
RAB5B-208ENST00000550283 NUDT13Q86X67 352 aa10.46□□□□□ -0.73
RAB5B-208ENST00000550283 BEST3Q8N1M1 668 aa10.46□□□□□ -0.73
RAB5B-208ENST00000550283 SRFBP1Q8NEF9 429 aaKnown RBP10.46□□□□□ -0.73
RAB5B-208ENST00000550283 DNAJB14Q8TBM8 379 aa10.46□□□□□ -0.73
RAB5B-208ENST00000550283 M1APQ8TC57 530 aa10.46□□□□□ -0.73
RAB5B-208ENST00000550283 AGR3Q8TD06 166 aa10.46□□□□□ -0.73
RAB5B-208ENST00000550283 THAP3Q8WTV1 239 aaPredicted RBP10.46□□□□□ -0.73
RAB5B-208ENST00000550283 NUDT8Q8WV74 236 aa10.46□□□□□ -0.73
RAB5B-208ENST00000550283 NCLNQ969V3 563 aa10.46□□□□□ -0.73
RAB5B-208ENST00000550283 TLCD1Q96CP7 247 aa10.46□□□□□ -0.73
RAB5B-208ENST00000550283 CCDC126Q96EE4 140 aa10.46□□□□□ -0.73
RAB5B-208ENST00000550283 PGM2Q96G03 612 aa10.46□□□□□ -0.73
RAB5B-208ENST00000550283 AGAP4Q96P64 663 aa10.46□□□□□ -0.73
RAB5B-208ENST00000550283 LPAR4Q99677 370 aa10.46□□□□□ -0.73
RAB5B-208ENST00000550283 SH3GL2Q99962 352 aa10.46□□□□□ -0.73
RAB5B-208ENST00000550283 EBPLQ9BY08 206 aa10.46□□□□□ -0.73
RAB5B-208ENST00000550283 ROGDIQ9GZN7 287 aa10.46□□□□□ -0.73
RAB5B-208ENST00000550283 RPF2Q9H7B2 306 aaKnown RBP10.46□□□□□ -0.73
RAB5B-208ENST00000550283 BRF2Q9HAW0 419 aa10.46□□□□□ -0.73
RAB5B-208ENST00000550283 TMBIM4Q9HC24 238 aa10.46□□□□□ -0.73
RAB5B-208ENST00000550283 MMP25Q9NPA2 562 aa10.46□□□□□ -0.73
RAB5B-208ENST00000550283 ANKRD10Q9NXR5 420 aa10.46□□□□□ -0.73
RAB5B-208ENST00000550283 C19orf25Q9UFG5 118 aaPredicted RBP10.46□□□□□ -0.73
RAB5B-208ENST00000550283 CES1P1Q9UKY3 287 aa10.46□□□□□ -0.73
RAB5B-208ENST00000550283 EXO1Q9UQ84 846 aaKnown RBP10.46□□□□□ -0.73
RAB5B-208ENST00000550283 UBR5O95071 2799 aaPredicted RBP10.45□□□□□ -0.74
RAB5B-208ENST00000550283 A0A088AWK7 358 aa10.45□□□□□ -0.74
RAB5B-208ENST00000550283 TRBV11-1A0A0K0K1C0 115 aa10.45□□□□□ -0.74
RAB5B-208ENST00000550283 GOLGA6L10A6NI86 522 aa10.45□□□□□ -0.74
RAB5B-208ENST00000550283 ULK1O75385 1050 aa10.45□□□□□ -0.74
RAB5B-208ENST00000550283 NME6O75414 186 aaPredicted RBP10.45□□□□□ -0.74
RAB5B-208ENST00000550283 KRT6AP02538 564 aa10.45□□□□□ -0.74
RAB5B-208ENST00000550283 KRT6BP04259 564 aa10.45□□□□□ -0.74
RAB5B-208ENST00000550283 ENO1P06733 434 aaKnown RBP10.45□□□□□ -0.74
RAB5B-208ENST00000550283 CT62P0C5K7 136 aa10.45□□□□□ -0.74
RAB5B-208ENST00000550283 NR2F6P10588 404 aa10.45□□□□□ -0.74
RAB5B-208ENST00000550283 ZNF10P21506 573 aaPredicted RBP10.45□□□□□ -0.74
RAB5B-208ENST00000550283 TACR1P25103 407 aa10.45□□□□□ -0.74
RAB5B-208ENST00000550283 TSFMP43897 325 aaKnown RBP10.45□□□□□ -0.74
RAB5B-208ENST00000550283 KRT6CP48668 564 aa10.45□□□□□ -0.74
RAB5B-208ENST00000550283 GYS2P54840 703 aa10.45□□□□□ -0.74
RAB5B-208ENST00000550283 PHEXP78562 749 aa10.45□□□□□ -0.74
RAB5B-208ENST00000550283 CSTF3Q12996 717 aaKnown RBP10.45□□□□□ -0.74
RAB5B-208ENST00000550283 CFAP157Q5JU67 520 aa10.45□□□□□ -0.74
RAB5B-208ENST00000550283 ACER2Q5QJU3 275 aa10.45□□□□□ -0.74
RAB5B-208ENST00000550283 CCNYL2Q5T2Q4 361 aa10.45□□□□□ -0.74
RAB5B-208ENST00000550283 NDUFAF5Q5TEU4 345 aa10.45□□□□□ -0.74
RAB5B-208ENST00000550283 KANK2Q63ZY3 851 aa10.45□□□□□ -0.74
RAB5B-208ENST00000550283 ISLR2Q6UXK2 745 aa10.45□□□□□ -0.74
RAB5B-208ENST00000550283 Q6ZSR9 355 aa10.45□□□□□ -0.74
RAB5B-208ENST00000550283 ZNF605Q86T29 641 aa10.45□□□□□ -0.74
RAB5B-208ENST00000550283 TEX19Q8NA77 164 aa10.45□□□□□ -0.74
RAB5B-208ENST00000550283 FAM76AQ8TAV0 307 aa10.45□□□□□ -0.74
RAB5B-208ENST00000550283 C3orf30Q96M34 536 aa10.45□□□□□ -0.74
RAB5B-208ENST00000550283 SIGLEC12Q96PQ1 595 aa10.45□□□□□ -0.74
RAB5B-208ENST00000550283 CDCP1Q9H5V8 836 aa10.45□□□□□ -0.74
RAB5B-208ENST00000550283 KCNK13Q9HB14 408 aa10.45□□□□□ -0.74
RAB5B-208ENST00000550283 LYARQ9NX58 379 aaKnown RBP10.45□□□□□ -0.74
RAB5B-208ENST00000550283 VPS29Q9UBQ0 182 aa10.45□□□□□ -0.74
RAB5B-208ENST00000550283 VTI1BQ9UEU0 232 aa10.45□□□□□ -0.74
RAB5B-208ENST00000550283 ZDHHC2Q9UIJ5 367 aa10.45□□□□□ -0.74
RAB5B-208ENST00000550283 PPIEQ9UNP9 301 aaKnown RBP10.45□□□□□ -0.74
RAB5B-208ENST00000550283 DLGAP4Q9Y2H0 992 aa10.45□□□□□ -0.74
RAB5B-208ENST00000550283 DNAJC15Q9Y5T4 150 aa10.45□□□□□ -0.74
RAB5B-208ENST00000550283 USP9XQ93008 2570 aaPredicted RBP10.44□□□□□ -0.74
RAB5B-208ENST00000550283 SERTM1A2A2V5 107 aa10.44□□□□□ -0.74
RAB5B-208ENST00000550283 PCDH17O14917 1159 aa10.44□□□□□ -0.74
RAB5B-208ENST00000550283 IFNA16P05015 189 aa10.44□□□□□ -0.74
RAB5B-208ENST00000550283 LINC00032P0C843 101 aa10.44□□□□□ -0.74
RAB5B-208ENST00000550283 BGNP21810 368 aa10.44□□□□□ -0.74
RAB5B-208ENST00000550283 HPDP32754 393 aaPredicted RBP10.44□□□□□ -0.74
RAB5B-208ENST00000550283 ARFIP1P53367 373 aa10.44□□□□□ -0.74
RAB5B-208ENST00000550283 MAPK12P53778 367 aa10.44□□□□□ -0.74
RAB5B-208ENST00000550283 MAGOHP61326 146 aaKnown RBP10.44□□□□□ -0.74
RAB5B-208ENST00000550283 ZNF33BQ06732 778 aa10.44□□□□□ -0.74
RAB5B-208ENST00000550283 DMTNQ08495 405 aa10.44□□□□□ -0.74
RAB5B-208ENST00000550283 DUSP8Q13202 625 aa10.44□□□□□ -0.74
RAB5B-208ENST00000550283 RCN2Q14257 317 aa10.44□□□□□ -0.74
RAB5B-208ENST00000550283 KIAA0040Q15053 153 aa10.44□□□□□ -0.74
RAB5B-208ENST00000550283 ELAVL1Q15717 326 aaKnown RBP10.44□□□□□ -0.74
RAB5B-208ENST00000550283 LTB4RQ15722 352 aa10.44□□□□□ -0.74
RAB5B-208ENST00000550283 EXT1Q16394 746 aa10.44□□□□□ -0.74
RAB5B-208ENST00000550283 TTMPQ5BVD1 217 aa10.44□□□□□ -0.74
RAB5B-208ENST00000550283 CYP20A1Q6UW02 462 aa10.44□□□□□ -0.74
RAB5B-208ENST00000550283 TRIM46Q7Z4K8 759 aa10.44□□□□□ -0.74
RAB5B-208ENST00000550283 CISD2Q8N5K1 135 aaKnown RBP10.44□□□□□ -0.74
RAB5B-208ENST00000550283 ANKRD42Q8N9B4 389 aa10.44□□□□□ -0.74
RAB5B-208ENST00000550283 B3GNT7Q8NFL0 401 aa10.44□□□□□ -0.74
RAB5B-208ENST00000550283 ADAMTS18Q8TE60 1221 aa10.44□□□□□ -0.74
RAB5B-208ENST00000550283 ZNF721Q8TF20 911 aa10.44□□□□□ -0.74
RAB5B-208ENST00000550283 C16orf78Q8WTQ4 265 aa10.44□□□□□ -0.74
RAB5B-208ENST00000550283 CNDP1Q96KN2 507 aa10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms