RNA–Protein interactions for RNA: ENST00000550051.5

TRAFD1-207, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 1 (best)

Gene TRAFD1, Length 1,003 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-207ENST00000550051 GOSR1O95249 250 aa9.07□□□□□ -0.96
TRAFD1-207ENST00000550051 ETHE1O95571 254 aa9.07□□□□□ -0.96
TRAFD1-207ENST00000550051 C1QAP02745 245 aa9.07□□□□□ -0.96
TRAFD1-207ENST00000550051 RAF1P04049 648 aa9.07□□□□□ -0.96
TRAFD1-207ENST00000550051 IGKV3-11P04433 115 aa9.07□□□□□ -0.96
TRAFD1-207ENST00000550051 RFPL3SP0C7P2 107 aa9.07□□□□□ -0.96
TRAFD1-207ENST00000550051 EPXP11678 715 aa9.07□□□□□ -0.96
TRAFD1-207ENST00000550051 UQCRC1P31930 480 aa9.07□□□□□ -0.96
TRAFD1-207ENST00000550051 PIGAP37287 484 aa9.07□□□□□ -0.96
TRAFD1-207ENST00000550051 KCNC1P48547 511 aa9.07□□□□□ -0.96
TRAFD1-207ENST00000550051 FNTAP49354 379 aa9.07□□□□□ -0.96
TRAFD1-207ENST00000550051 ASCL1P50553 236 aa9.07□□□□□ -0.96
TRAFD1-207ENST00000550051 TGM3Q08188 693 aa9.07□□□□□ -0.96
TRAFD1-207ENST00000550051 ASPHQ12797 758 aa9.07□□□□□ -0.96
TRAFD1-207ENST00000550051 SNTB1Q13884 538 aaKnown RBP9.07□□□□□ -0.96
TRAFD1-207ENST00000550051 DEFB113Q30KQ7 82 aa9.07□□□□□ -0.96
TRAFD1-207ENST00000550051 PRAMEF9Q5VWM5 478 aa9.07□□□□□ -0.96
TRAFD1-207ENST00000550051 DESI1Q6ICB0 168 aa9.07□□□□□ -0.96
TRAFD1-207ENST00000550051 LYPD8Q6UX82 237 aa9.07□□□□□ -0.96
TRAFD1-207ENST00000550051 PAMR1Q6UXH9 720 aa9.07□□□□□ -0.96
TRAFD1-207ENST00000550051 MAATS1Q7Z4T9 603 aa9.07□□□□□ -0.96
TRAFD1-207ENST00000550051 UBE3DQ7Z6J8 389 aa9.07□□□□□ -0.96
TRAFD1-207ENST00000550051 ADAMTSL2Q86TH1 951 aa9.07□□□□□ -0.96
TRAFD1-207ENST00000550051 SRFBP1Q8NEF9 429 aaKnown RBP9.07□□□□□ -0.96
TRAFD1-207ENST00000550051 NEIL3Q8TAT5 605 aa9.07□□□□□ -0.96
TRAFD1-207ENST00000550051 CCT6BQ92526 530 aa9.07□□□□□ -0.96
TRAFD1-207ENST00000550051 SLCO2A1Q92959 643 aa9.07□□□□□ -0.96
TRAFD1-207ENST00000550051 KCNC2Q96PR1 638 aa9.07□□□□□ -0.96
TRAFD1-207ENST00000550051 F2RL3Q96RI0 385 aa9.07□□□□□ -0.96
TRAFD1-207ENST00000550051 EGFL8Q99944 293 aa9.07□□□□□ -0.96
TRAFD1-207ENST00000550051 TBCDQ9BTW9 1192 aa9.07□□□□□ -0.96
TRAFD1-207ENST00000550051 ROGDIQ9GZN7 287 aa9.07□□□□□ -0.96
TRAFD1-207ENST00000550051 EXO5Q9H790 373 aa9.07□□□□□ -0.96
TRAFD1-207ENST00000550051 PPANQ9NQ55 473 aaKnown RBP9.07□□□□□ -0.96
TRAFD1-207ENST00000550051 COPS7AQ9UBW8 275 aa9.07□□□□□ -0.96
TRAFD1-207ENST00000550051 MTRF1LQ9UGC7 380 aaKnown RBP9.07□□□□□ -0.96
TRAFD1-207ENST00000550051 BOKQ9UMX3 212 aaPredicted RBP9.07□□□□□ -0.96
TRAFD1-207ENST00000550051 JRKLQ9Y4A0 524 aa9.07□□□□□ -0.96
TRAFD1-207ENST00000550051 IKBKGQ9Y6K9 419 aa9.07□□□□□ -0.96
TRAFD1-207ENST00000550051 HRNRQ86YZ3 2850 aaPredicted RBP9.07□□□□□ -0.96
TRAFD1-207ENST00000550051 VPS13CQ709C8 3753 aa9.07□□□□□ -0.96
TRAFD1-207ENST00000550051 MYOCOSA0A1B0GUC4 107 aa9.06□□□□□ -0.96
TRAFD1-207ENST00000550051 ANKRD33BA6NCL7 494 aa9.06□□□□□ -0.96
TRAFD1-207ENST00000550051 DNALI1O14645 258 aaPredicted RBP9.06□□□□□ -0.96
TRAFD1-207ENST00000550051 CLGNO14967 610 aa9.06□□□□□ -0.96
TRAFD1-207ENST00000550051 TAPBPO15533 448 aa9.06□□□□□ -0.96
TRAFD1-207ENST00000550051 LDB3O75112 727 aa9.06□□□□□ -0.96
TRAFD1-207ENST00000550051 SCELO95171 688 aa9.06□□□□□ -0.96
TRAFD1-207ENST00000550051 ATE1O95260 518 aa9.06□□□□□ -0.96
TRAFD1-207ENST00000550051 ATP5A1P25705 553 aaKnown RBP9.06□□□□□ -0.96
TRAFD1-207ENST00000550051 IVDP26440 423 aa9.06□□□□□ -0.96
TRAFD1-207ENST00000550051 CERS1P27544 350 aa9.06□□□□□ -0.96
TRAFD1-207ENST00000550051 CASP2P42575 452 aa9.06□□□□□ -0.96
TRAFD1-207ENST00000550051 STT3AP46977 705 aa9.06□□□□□ -0.96
TRAFD1-207ENST00000550051 TAS2R39P59534 338 aa9.06□□□□□ -0.96
TRAFD1-207ENST00000550051 IGLV3-21P80748 117 aaPredicted RBP9.06□□□□□ -0.96
TRAFD1-207ENST00000550051 LTBQ06643 244 aa9.06□□□□□ -0.96
TRAFD1-207ENST00000550051 LAPTM5Q13571 262 aa9.06□□□□□ -0.96
TRAFD1-207ENST00000550051 E2F2Q14209 437 aa9.06□□□□□ -0.96
TRAFD1-207ENST00000550051 SF3B4Q15427 424 aaKnown RBP eCLIP9.06□□□□□ -0.96
TRAFD1-207ENST00000550051 TGFBIQ15582 683 aa9.06□□□□□ -0.96
TRAFD1-207ENST00000550051 TSNQ15631 228 aaKnown RBP9.06□□□□□ -0.96
TRAFD1-207ENST00000550051 C18orf21Q32NC0 220 aaPredicted RBP9.06□□□□□ -0.96
TRAFD1-207ENST00000550051 TMEM35AQ53FP2 167 aa9.06□□□□□ -0.96
TRAFD1-207ENST00000550051 STEAP4Q687X5 459 aa9.06□□□□□ -0.96
TRAFD1-207ENST00000550051 TRMT10BQ6PF06 316 aaKnown RBP9.06□□□□□ -0.96
TRAFD1-207ENST00000550051 ZC3HC1Q86WB0 502 aaKnown RBP9.06□□□□□ -0.96
TRAFD1-207ENST00000550051 GAS2L3Q86XJ1 694 aa9.06□□□□□ -0.96
TRAFD1-207ENST00000550051 KIF18BQ86Y91 864 aa9.06□□□□□ -0.96
TRAFD1-207ENST00000550051 LACC1Q8IV20 430 aa9.06□□□□□ -0.96
TRAFD1-207ENST00000550051 TCAIMQ8N3R3 496 aa9.06□□□□□ -0.96
TRAFD1-207ENST00000550051 ACOT4Q8N9L9 421 aa9.06□□□□□ -0.96
TRAFD1-207ENST00000550051 TNIP2Q8NFZ5 429 aa9.06□□□□□ -0.96
TRAFD1-207ENST00000550051 SLC22A8Q8TCC7 542 aa9.06□□□□□ -0.96
TRAFD1-207ENST00000550051 ANKRD49Q8WVL7 239 aa9.06□□□□□ -0.96
TRAFD1-207ENST00000550051 LRRC39Q96DD0 335 aa9.06□□□□□ -0.96
TRAFD1-207ENST00000550051 SPACA9Q96E40 222 aaPredicted RBP9.06□□□□□ -0.96
TRAFD1-207ENST00000550051 PTCD3Q96EY7 689 aaKnown RBP9.06□□□□□ -0.96
TRAFD1-207ENST00000550051 C18orf12Q96KH6 178 aa9.06□□□□□ -0.96
TRAFD1-207ENST00000550051 PWWP2AQ96N64 755 aa9.06□□□□□ -0.96
TRAFD1-207ENST00000550051 TIMP4Q99727 224 aa9.06□□□□□ -0.96
TRAFD1-207ENST00000550051 ZNF703Q9H7S9 590 aaPredicted RBP9.06□□□□□ -0.96
TRAFD1-207ENST00000550051 PLEKHF2Q9H8W4 249 aa9.06□□□□□ -0.96
TRAFD1-207ENST00000550051 CNOT10Q9H9A5 744 aaKnown RBP9.06□□□□□ -0.96
TRAFD1-207ENST00000550051 COPS7BQ9H9Q2 264 aaPredicted RBP9.06□□□□□ -0.96
TRAFD1-207ENST00000550051 POPDC3Q9HBV1 291 aa9.06□□□□□ -0.96
TRAFD1-207ENST00000550051 DMRT3Q9NQL9 472 aa9.06□□□□□ -0.96
TRAFD1-207ENST00000550051 SLC17A6Q9P2U8 582 aa9.06□□□□□ -0.96
TRAFD1-207ENST00000550051 CTNNAL1Q9UBT7 734 aa9.06□□□□□ -0.96
TRAFD1-207ENST00000550051 CHCHD2Q9Y6H1 151 aaPredicted RBP9.06□□□□□ -0.96
TRAFD1-207ENST00000550051 TEX264Q9Y6I9 313 aa9.06□□□□□ -0.96
TRAFD1-207ENST00000550051 FLNAP21333 2647 aaKnown RBP9.06□□□□□ -0.96
TRAFD1-207ENST00000550051 NPEPPSL1A6NEC2 478 aa9.05□□□□□ -0.96
TRAFD1-207ENST00000550051 TUBAL3A6NHL2 446 aa9.05□□□□□ -0.96
TRAFD1-207ENST00000550051 LRRC3CA6NJW4 275 aa9.05□□□□□ -0.96
TRAFD1-207ENST00000550051 GOLGA6L6A8MZA4 724 aa9.05□□□□□ -0.96
TRAFD1-207ENST00000550051 PGRMC1O00264 195 aaKnown RBP9.05□□□□□ -0.96
TRAFD1-207ENST00000550051 TRIM3O75382 744 aaPredicted RBP9.05□□□□□ -0.96
TRAFD1-207ENST00000550051 BANF1O75531 89 aa9.05□□□□□ -0.96
TRAFD1-207ENST00000550051 FBXO45P0C2W1 286 aa9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 104.5 ms