RNA–Protein interactions for RNA: ENST00000549578.5

VPS29-206, Transcript of VPS29, retromer complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS29, Length 1,523 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-206ENST00000549578 C8orf89P0DMQ9 161 aa19.89■□□□□ 0.77
VPS29-206ENST00000549578 DRD2P14416 443 aa19.89■□□□□ 0.77
VPS29-206ENST00000549578 DDCP20711 480 aa19.89■□□□□ 0.77
VPS29-206ENST00000549578 MMP11P24347 488 aa19.89■□□□□ 0.77
VPS29-206ENST00000549578 ARFIP2P53365 341 aa19.89■□□□□ 0.77
VPS29-206ENST00000549578 NME5P56597 212 aa19.89■□□□□ 0.77
VPS29-206ENST00000549578 SSPNQ14714 243 aa19.89■□□□□ 0.77
VPS29-206ENST00000549578 ATP1A1-AS1Q5TC04 95 aa19.89■□□□□ 0.77
VPS29-206ENST00000549578 FAM180BQ6P0A1 224 aa19.89■□□□□ 0.77
VPS29-206ENST00000549578 PPP1R32Q7Z5V6 425 aa19.89■□□□□ 0.77
VPS29-206ENST00000549578 CPLX4Q7Z7G2 160 aa19.89■□□□□ 0.77
VPS29-206ENST00000549578 TICAM1Q8IUC6 712 aa19.89■□□□□ 0.77
VPS29-206ENST00000549578 PARP9Q8IXQ6 854 aa19.89■□□□□ 0.77
VPS29-206ENST00000549578 KRTCAP2Q8N6L1 136 aa19.89■□□□□ 0.77
VPS29-206ENST00000549578 METTL21AQ8WXB1 218 aa19.89■□□□□ 0.77
VPS29-206ENST00000549578 STON2Q8WXE9 905 aa19.89■□□□□ 0.77
VPS29-206ENST00000549578 C8orf44Q96CB5 159 aa19.89■□□□□ 0.77
VPS29-206ENST00000549578 CATSPER2Q96P56 530 aa19.89■□□□□ 0.77
VPS29-206ENST00000549578 ELAC2Q9BQ52 826 aaKnown RBP19.89■□□□□ 0.77
VPS29-206ENST00000549578 NSRP1Q9H0G5 558 aaKnown RBP19.89■□□□□ 0.77
VPS29-206ENST00000549578 MIEF1Q9NQG6 463 aa19.89■□□□□ 0.77
VPS29-206ENST00000549578 SSUH2Q9Y2M2 353 aa19.89■□□□□ 0.77
VPS29-206ENST00000549578 HS3ST3B1Q9Y662 390 aa19.89■□□□□ 0.77
VPS29-206ENST00000549578 CFAP47Q6ZTR5 3102 aa19.89■□□□□ 0.77
VPS29-206ENST00000549578 NKX2-8O15522 239 aa19.88■□□□□ 0.77
VPS29-206ENST00000549578 FOXK2Q01167 660 aa19.88■□□□□ 0.77
VPS29-206ENST00000549578 TLE3Q04726 772 aa19.88■□□□□ 0.77
VPS29-206ENST00000549578 STX4Q12846 297 aa19.88■□□□□ 0.77
VPS29-206ENST00000549578 ANKRD26P1Q6NSI1 321 aa19.88■□□□□ 0.77
VPS29-206ENST00000549578 LRRC69Q6ZNQ3 347 aa19.88■□□□□ 0.77
VPS29-206ENST00000549578 NUDT8Q8WV74 236 aa19.88■□□□□ 0.77
VPS29-206ENST00000549578 KLHL29Q96CT2 875 aa19.88■□□□□ 0.77
VPS29-206ENST00000549578 UTS2RQ9UKP6 389 aa19.88■□□□□ 0.77
VPS29-206ENST00000549578 GPR45Q9Y5Y3 372 aa19.88■□□□□ 0.77
VPS29-206ENST00000549578 ANKRD11Q6UB99 2663 aaPredicted RBP19.88■□□□□ 0.77
VPS29-206ENST00000549578 TCRBV16S1A1N1A0A5B0 115 aa19.87■□□□□ 0.77
VPS29-206ENST00000549578 ERAL1O75616 437 aaKnown RBP19.87■□□□□ 0.77
VPS29-206ENST00000549578 GPR75O95800 540 aa19.87■□□□□ 0.77
VPS29-206ENST00000549578 CYC1P08574 325 aa19.87■□□□□ 0.77
VPS29-206ENST00000549578 FURINP09958 794 aa19.87■□□□□ 0.77
VPS29-206ENST00000549578 PRKAR1AP10644 381 aa19.87■□□□□ 0.77
VPS29-206ENST00000549578 ITPKBP27987 946 aa19.87■□□□□ 0.77
VPS29-206ENST00000549578 PPP2R1BP30154 601 aa19.87■□□□□ 0.77
VPS29-206ENST00000549578 ACTN3Q08043 901 aaPredicted RBP19.87■□□□□ 0.77
VPS29-206ENST00000549578 UGT8Q16880 541 aa19.87■□□□□ 0.77
VPS29-206ENST00000549578 PRSS53Q2L4Q9 553 aa19.87■□□□□ 0.77
VPS29-206ENST00000549578 ZNF750Q32MQ0 723 aa19.87■□□□□ 0.77
VPS29-206ENST00000549578 TMEM205Q6UW68 189 aa19.87■□□□□ 0.77
VPS29-206ENST00000549578 ANKRD37Q7Z713 158 aa19.87■□□□□ 0.77
VPS29-206ENST00000549578 KDF1Q8NAX2 398 aaPredicted RBP19.87■□□□□ 0.77
VPS29-206ENST00000549578 ADAMTS17Q8TE56 1095 aa19.87■□□□□ 0.77
VPS29-206ENST00000549578 C10orf82Q8WW14 230 aa19.87■□□□□ 0.77
VPS29-206ENST00000549578 EXOSC8Q96B26 276 aaKnown RBP19.87■□□□□ 0.77
VPS29-206ENST00000549578 ALOXE3Q9BYJ1 711 aa19.87■□□□□ 0.77
VPS29-206ENST00000549578 REEP4Q9H6H4 257 aa19.87■□□□□ 0.77
VPS29-206ENST00000549578 EHD3Q9NZN3 535 aa19.87■□□□□ 0.77
VPS29-206ENST00000549578 IGHV3-20A0A0C4DH32 117 aa19.86■□□□□ 0.77
VPS29-206ENST00000549578 CDC14CA4D256 554 aa19.86■□□□□ 0.77
VPS29-206ENST00000549578 ZNF891A8MT65 544 aaPredicted RBP19.86■□□□□ 0.77
VPS29-206ENST00000549578 SOCS6O14544 535 aa19.86■□□□□ 0.77
VPS29-206ENST00000549578 ANKRD28O15084 1053 aa19.86■□□□□ 0.77
VPS29-206ENST00000549578 SHOX2O60902 331 aaPredicted RBP19.86■□□□□ 0.77
VPS29-206ENST00000549578 IGHEP01854 428 aa19.86■□□□□ 0.77
VPS29-206ENST00000549578 IDO1P14902 403 aa19.86■□□□□ 0.77
VPS29-206ENST00000549578 PIK3R1P27986 724 aa19.86■□□□□ 0.77
VPS29-206ENST00000549578 CLDN8P56748 225 aa19.86■□□□□ 0.77
VPS29-206ENST00000549578 EEF1A2Q05639 463 aaKnown RBP19.86■□□□□ 0.77
VPS29-206ENST00000549578 SPATA21Q7Z572 469 aa19.86■□□□□ 0.77
VPS29-206ENST00000549578 RAB43Q86YS6 212 aa19.86■□□□□ 0.77
VPS29-206ENST00000549578 OR4K14Q8NGD5 310 aa19.86■□□□□ 0.77
VPS29-206ENST00000549578 DPY30Q9C005 99 aa19.86■□□□□ 0.77
VPS29-206ENST00000549578 BRINP2Q9C0B6 783 aa19.86■□□□□ 0.77
VPS29-206ENST00000549578 EPN3Q9H201 632 aa19.86■□□□□ 0.77
VPS29-206ENST00000549578 PSME2Q9UL46 239 aa19.86■□□□□ 0.77
VPS29-206ENST00000549578 CROCCQ5TZA2 2017 aa19.86■□□□□ 0.77
VPS29-206ENST00000549578 LAMA5O15230 3695 aa19.86■□□□□ 0.77
VPS29-206ENST00000549578 PCSK5Q92824 1860 aa19.86■□□□□ 0.77
VPS29-206ENST00000549578 A0A087WV48 116 aa19.86■□□□□ 0.77
VPS29-206ENST00000549578 SCAMP2O15127 329 aaKnown RBP19.86■□□□□ 0.77
VPS29-206ENST00000549578 PRPS1L1P21108 318 aa19.86■□□□□ 0.77
VPS29-206ENST00000549578 HPCAL1P37235 193 aa19.86■□□□□ 0.77
VPS29-206ENST00000549578 UFM1P61960 85 aa19.86■□□□□ 0.77
VPS29-206ENST00000549578 IGLV3-21P80748 117 aaPredicted RBP19.86■□□□□ 0.77
VPS29-206ENST00000549578 PDE7AQ13946 482 aa19.86■□□□□ 0.77
VPS29-206ENST00000549578 RPS6KA2Q15349 733 aa19.86■□□□□ 0.77
VPS29-206ENST00000549578 GSTA3Q16772 222 aa19.86■□□□□ 0.77
VPS29-206ENST00000549578 ZNF385BQ569K4 471 aa19.86■□□□□ 0.77
VPS29-206ENST00000549578 BROXQ5VW32 411 aa19.86■□□□□ 0.77
VPS29-206ENST00000549578 KIRREL2Q6UWL6 708 aa19.86■□□□□ 0.77
VPS29-206ENST00000549578 CCDC81Q6ZN84 652 aa19.86■□□□□ 0.77
VPS29-206ENST00000549578 MRGPREQ86SM8 312 aa19.86■□□□□ 0.77
VPS29-206ENST00000549578 RIMKLAQ8IXN7 391 aa19.86■□□□□ 0.77
VPS29-206ENST00000549578 OR7A2PQ8NGA2 310 aa19.86■□□□□ 0.77
VPS29-206ENST00000549578 PPCDCQ96CD2 204 aa19.86■□□□□ 0.77
VPS29-206ENST00000549578 CNRIP1Q96F85 164 aaPredicted RBP19.86■□□□□ 0.77
VPS29-206ENST00000549578 TEX37Q96LM6 180 aa19.86■□□□□ 0.77
VPS29-206ENST00000549578 ACACBO00763 2458 aa19.85■□□□□ 0.77
VPS29-206ENST00000549578 GABRR3A8MPY1 467 aa19.85■□□□□ 0.77
VPS29-206ENST00000549578 A8MUA0 341 aa19.85■□□□□ 0.77
VPS29-206ENST00000549578 IFNA16P05015 189 aa19.85■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms