RNA–Protein interactions for RNA: ENST00000543545.5

CPSF7-221, Transcript of cleavage and polyadenylation specific factor 7, human

TSL 5

Gene CPSF7, Length 495 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CPSF7-221	ENST00000543545	NCOR2	Q9Y618	2525 aa		9.55	□□□□□ -0.88
CPSF7-221	ENST00000543545	COL27A1	Q8IZC6	1860 aa	Predicted RBP	9.55	□□□□□ -0.88
CPSF7-221	ENST00000543545	SEC16A	O15027	2179 aa		9.54	□□□□□ -0.88
CPSF7-221	ENST00000543545	CDC14C	A4D256	554 aa		9.54	□□□□□ -0.88
CPSF7-221	ENST00000543545	PEX12	O00623	359 aa		9.54	□□□□□ -0.88
CPSF7-221	ENST00000543545	TERT	O14746	1132 aa	Known RBP	9.54	□□□□□ -0.88
CPSF7-221	ENST00000543545	FGF17	O60258	216 aa		9.54	□□□□□ -0.88
CPSF7-221	ENST00000543545	OR10H2	O60403	315 aa		9.54	□□□□□ -0.88
CPSF7-221	ENST00000543545	SNX3	O60493	162 aa		9.54	□□□□□ -0.88
CPSF7-221	ENST00000543545	SLC22A3	O75751	556 aa		9.54	□□□□□ -0.88
CPSF7-221	ENST00000543545	GPR75	O95800	540 aa		9.54	□□□□□ -0.88
CPSF7-221	ENST00000543545	RECK	O95980	971 aa		9.54	□□□□□ -0.88
CPSF7-221	ENST00000543545	UMOD	P07911	640 aa		9.54	□□□□□ -0.88
CPSF7-221	ENST00000543545	PCSK2	P16519	638 aa		9.54	□□□□□ -0.88
CPSF7-221	ENST00000543545	MMP11	P24347	488 aa		9.54	□□□□□ -0.88
CPSF7-221	ENST00000543545	FEN1	P39748	380 aa	Known RBP	9.54	□□□□□ -0.88
CPSF7-221	ENST00000543545	EIF2S3	P41091	472 aa	Known RBP	9.54	□□□□□ -0.88
CPSF7-221	ENST00000543545	CLDN8	P56748	225 aa		9.54	□□□□□ -0.88
CPSF7-221	ENST00000543545	OR4D2	P58180	307 aa		9.54	□□□□□ -0.88
CPSF7-221	ENST00000543545	UFM1	P61960	85 aa		9.54	□□□□□ -0.88
CPSF7-221	ENST00000543545	RHAG	Q02094	409 aa		9.54	□□□□□ -0.88
CPSF7-221	ENST00000543545	FOLH1	Q04609	750 aa		9.54	□□□□□ -0.88
CPSF7-221	ENST00000543545	SRSF6	Q13247	344 aa	Known RBP	9.54	□□□□□ -0.88
CPSF7-221	ENST00000543545	SERTAD2	Q14140	314 aa		9.54	□□□□□ -0.88
CPSF7-221	ENST00000543545	CPTP	Q5TA50	214 aa		9.54	□□□□□ -0.88
CPSF7-221	ENST00000543545	BROX	Q5VW32	411 aa		9.54	□□□□□ -0.88
CPSF7-221	ENST00000543545	FAM180B	Q6P0A1	224 aa		9.54	□□□□□ -0.88
CPSF7-221	ENST00000543545	SLC48A1	Q6P1K1	146 aa		9.54	□□□□□ -0.88
CPSF7-221	ENST00000543545	QSOX2	Q6ZRP7	698 aa		9.54	□□□□□ -0.88
CPSF7-221	ENST00000543545	TMEM151B	Q8IW70	566 aa		9.54	□□□□□ -0.88
CPSF7-221	ENST00000543545	ZSCAN1	Q8NBB4	408 aa		9.54	□□□□□ -0.88
CPSF7-221	ENST00000543545	PLPP5	Q8NEB5	264 aa		9.54	□□□□□ -0.88
CPSF7-221	ENST00000543545	C7orf57	Q8NEG2	295 aa		9.54	□□□□□ -0.88
CPSF7-221	ENST00000543545	DNAJB14	Q8TBM8	379 aa		9.54	□□□□□ -0.88
CPSF7-221	ENST00000543545	ANKRD9	Q96BM1	317 aa	Predicted RBP	9.54	□□□□□ -0.88
CPSF7-221	ENST00000543545	RBM18	Q96H35	190 aa	Known RBP	9.54	□□□□□ -0.88
CPSF7-221	ENST00000543545	VPS50	Q96JG6	964 aa		9.54	□□□□□ -0.88
CPSF7-221	ENST00000543545	DGAT2	Q96PD7	388 aa		9.54	□□□□□ -0.88
CPSF7-221	ENST00000543545	ATAD3A	Q9NVI7	634 aa		9.54	□□□□□ -0.88
CPSF7-221	ENST00000543545	C19orf25	Q9UFG5	118 aa	Predicted RBP	9.54	□□□□□ -0.88
CPSF7-221	ENST00000543545	MAPRE3	Q9UPY8	281 aa		9.54	□□□□□ -0.88
CPSF7-221	ENST00000543545	PCDHGA6	Q9Y5G7	932 aa		9.54	□□□□□ -0.88
CPSF7-221	ENST00000543545	GPR45	Q9Y5Y3	372 aa		9.54	□□□□□ -0.88
CPSF7-221	ENST00000543545	IGHV3-20	A0A0C4DH32	117 aa		9.53	□□□□□ -0.88
CPSF7-221	ENST00000543545	SRRM3	A6NNA2	597 aa	Predicted RBP	9.53	□□□□□ -0.88
CPSF7-221	ENST00000543545	GABRR3	A8MPY1	467 aa		9.53	□□□□□ -0.88
CPSF7-221	ENST00000543545	ZNF891	A8MT65	544 aa	Predicted RBP	9.53	□□□□□ -0.88
CPSF7-221	ENST00000543545	SCAMP2	O15127	329 aa	Known RBP	9.53	□□□□□ -0.88
CPSF7-221	ENST00000543545	NKX2-8	O15522	239 aa		9.53	□□□□□ -0.88
CPSF7-221	ENST00000543545	DYRK3	O43781	588 aa		9.53	□□□□□ -0.88
CPSF7-221	ENST00000543545	SHOX2	O60902	331 aa	Predicted RBP	9.53	□□□□□ -0.88
CPSF7-221	ENST00000543545	FAM107A	O95990	144 aa		9.53	□□□□□ -0.88
CPSF7-221	ENST00000543545	FURIN	P09958	794 aa		9.53	□□□□□ -0.88
CPSF7-221	ENST00000543545	PRKAR1A	P10644	381 aa		9.53	□□□□□ -0.88
CPSF7-221	ENST00000543545	CSNK2A2	P19784	350 aa	Predicted RBP	9.53	□□□□□ -0.88
CPSF7-221	ENST00000543545	NT5E	P21589	574 aa		9.53	□□□□□ -0.88
CPSF7-221	ENST00000543545	NTS	P30990	170 aa		9.53	□□□□□ -0.88
CPSF7-221	ENST00000543545	CLNS1A	P54105	237 aa	Known RBP	9.53	□□□□□ -0.88
CPSF7-221	ENST00000543545	EEF1A2	Q05639	463 aa	Known RBP	9.53	□□□□□ -0.88
CPSF7-221	ENST00000543545	SQLE	Q14534	574 aa		9.53	□□□□□ -0.88
CPSF7-221	ENST00000543545	ZNF750	Q32MQ0	723 aa		9.53	□□□□□ -0.88
CPSF7-221	ENST00000543545	PDCD4	Q53EL6	469 aa	Known RBP	9.53	□□□□□ -0.88
CPSF7-221	ENST00000543545	SFT2D3	Q587I9	215 aa		9.53	□□□□□ -0.88
CPSF7-221	ENST00000543545	METTL21C	Q5VZV1	264 aa		9.53	□□□□□ -0.88
CPSF7-221	ENST00000543545	PAOX	Q6QHF9	649 aa		9.53	□□□□□ -0.88
CPSF7-221	ENST00000543545	LANCL3	Q6ZV70	420 aa		9.53	□□□□□ -0.88
CPSF7-221	ENST00000543545	ANKRD37	Q7Z713	158 aa		9.53	□□□□□ -0.88
CPSF7-221	ENST00000543545	SCUBE1	Q8IWY4	988 aa		9.53	□□□□□ -0.88
CPSF7-221	ENST00000543545	SPACA3	Q8IXA5	215 aa		9.53	□□□□□ -0.88
CPSF7-221	ENST00000543545	CCDC116	Q8IYX3	515 aa		9.53	□□□□□ -0.88
CPSF7-221	ENST00000543545	SAMD14	Q8IZD0	417 aa	Predicted RBP	9.53	□□□□□ -0.88
CPSF7-221	ENST00000543545	OR7A2P	Q8NGA2	310 aa		9.53	□□□□□ -0.88
CPSF7-221	ENST00000543545	PUM2	Q8TB72	1066 aa	Known RBP eCLIP	9.53	□□□□□ -0.88
CPSF7-221	ENST00000543545	C10orf82	Q8WW14	230 aa		9.53	□□□□□ -0.88
CPSF7-221	ENST00000543545	STON2	Q8WXE9	905 aa		9.53	□□□□□ -0.88
CPSF7-221	ENST00000543545	PPWD1	Q96BP3	646 aa	Known RBP	9.53	□□□□□ -0.88
CPSF7-221	ENST00000543545	C8orf44	Q96CB5	159 aa		9.53	□□□□□ -0.88
CPSF7-221	ENST00000543545	SLC45A3	Q96JT2	553 aa		9.53	□□□□□ -0.88
CPSF7-221	ENST00000543545	TMEM121B	Q9BXQ6	578 aa	Predicted RBP	9.53	□□□□□ -0.88
CPSF7-221	ENST00000543545	SLC35C2	Q9NQQ7	365 aa		9.53	□□□□□ -0.88
CPSF7-221	ENST00000543545	EHD3	Q9NZN3	535 aa		9.53	□□□□□ -0.88
CPSF7-221	ENST00000543545	COPG1	Q9Y678	874 aa	Known RBP	9.53	□□□□□ -0.88
CPSF7-221	ENST00000543545	DCHS1	Q96JQ0	3298 aa		9.52	□□□□□ -0.89
CPSF7-221	ENST00000543545	PTPRB	P23467	1997 aa		9.52	□□□□□ -0.89
CPSF7-221	ENST00000543545		C9JVG2	144 aa		9.52	□□□□□ -0.89
CPSF7-221	ENST00000543545	NDUFAB1	O14561	156 aa		9.52	□□□□□ -0.89
CPSF7-221	ENST00000543545	PCDH17	O14917	1159 aa		9.52	□□□□□ -0.89
CPSF7-221	ENST00000543545	PDPK1	O15530	556 aa		9.52	□□□□□ -0.89
CPSF7-221	ENST00000543545	CCDC22	O60826	627 aa		9.52	□□□□□ -0.89
CPSF7-221	ENST00000543545	CYC1	P08574	325 aa		9.52	□□□□□ -0.89
CPSF7-221	ENST00000543545	SLC35E2	P0CK97	266 aa		9.52	□□□□□ -0.89
CPSF7-221	ENST00000543545	LAMP1	P11279	417 aa		9.52	□□□□□ -0.89
CPSF7-221	ENST00000543545	CPM	P14384	443 aa		9.52	□□□□□ -0.89
CPSF7-221	ENST00000543545	POR	P16435	677 aa	Predicted RBP	9.52	□□□□□ -0.89
CPSF7-221	ENST00000543545	EFNA1	P20827	205 aa	Predicted RBP	9.52	□□□□□ -0.89
CPSF7-221	ENST00000543545	S100A3	P33764	101 aa		9.52	□□□□□ -0.89
CPSF7-221	ENST00000543545	MPI	P34949	423 aa		9.52	□□□□□ -0.89
CPSF7-221	ENST00000543545	PGD	P52209	483 aa		9.52	□□□□□ -0.89
CPSF7-221	ENST00000543545	NCBP2	P52298	156 aa	Known RBP eCLIP	9.52	□□□□□ -0.89
CPSF7-221	ENST00000543545	PLIN5	Q00G26	463 aa		9.52	□□□□□ -0.89

Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms