RNA–Protein interactions for RNA: ENST00000543048.5

TNFRSF1A-214, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 5

Gene TNFRSF1A, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-214ENST00000543048 SP1P08047 785 aa9.07□□□□□ -0.96
TNFRSF1A-214ENST00000543048 RPS17P08708 135 aaKnown RBP9.07□□□□□ -0.96
TNFRSF1A-214ENST00000543048 IMPDH1P20839 514 aa9.07□□□□□ -0.96
TNFRSF1A-214ENST00000543048 TRHRP34981 398 aaPredicted RBP9.07□□□□□ -0.96
TNFRSF1A-214ENST00000543048 BSGP35613 385 aa9.07□□□□□ -0.96
TNFRSF1A-214ENST00000543048 HSD17B3P37058 310 aa9.07□□□□□ -0.96
TNFRSF1A-214ENST00000543048 CYB561P49447 251 aa9.07□□□□□ -0.96
TNFRSF1A-214ENST00000543048 ST13P50502 369 aaKnown RBP9.07□□□□□ -0.96
TNFRSF1A-214ENST00000543048 HLCSP50747 726 aa9.07□□□□□ -0.96
TNFRSF1A-214ENST00000543048 CDH13P55290 713 aa9.07□□□□□ -0.96
TNFRSF1A-214ENST00000543048 CLCQ05315 142 aa9.07□□□□□ -0.96
TNFRSF1A-214ENST00000543048 IFT88Q13099 833 aa9.07□□□□□ -0.96
TNFRSF1A-214ENST00000543048 TRAF3Q13114 568 aa9.07□□□□□ -0.96
TNFRSF1A-214ENST00000543048 CASP8Q14790 479 aa9.07□□□□□ -0.96
TNFRSF1A-214ENST00000543048 FRG2Q64ET8 278 aa9.07□□□□□ -0.96
TNFRSF1A-214ENST00000543048 SLC25A25Q6KCM7 469 aa9.07□□□□□ -0.96
TNFRSF1A-214ENST00000543048 CYP20A1Q6UW02 462 aa9.07□□□□□ -0.96
TNFRSF1A-214ENST00000543048 OR4F6Q8NGB9 312 aa9.07□□□□□ -0.96
TNFRSF1A-214ENST00000543048 OR14A16Q8NHC5 309 aa9.07□□□□□ -0.96
TNFRSF1A-214ENST00000543048 PTPMT1Q8WUK0 201 aaPredicted RBP9.07□□□□□ -0.96
TNFRSF1A-214ENST00000543048 UBLCP1Q8WVY7 318 aaPredicted RBP9.07□□□□□ -0.96
TNFRSF1A-214ENST00000543048 NR4A3Q92570 626 aa9.07□□□□□ -0.96
TNFRSF1A-214ENST00000543048 SCMH1Q96GD3 660 aa9.07□□□□□ -0.96
TNFRSF1A-214ENST00000543048 RBM18Q96H35 190 aaKnown RBP9.07□□□□□ -0.96
TNFRSF1A-214ENST00000543048 C5orf34Q96MH7 638 aa9.07□□□□□ -0.96
TNFRSF1A-214ENST00000543048 NSUN5Q96P11 429 aaKnown RBP9.07□□□□□ -0.96
TNFRSF1A-214ENST00000543048 PSMG3-AS1Q96PY0 264 aa9.07□□□□□ -0.96
TNFRSF1A-214ENST00000543048 FRG2BQ96QU4 278 aa9.07□□□□□ -0.96
TNFRSF1A-214ENST00000543048 SLX1AQ9BQ83 275 aa9.07□□□□□ -0.96
TNFRSF1A-214ENST00000543048 TRIM45Q9H8W5 580 aaPredicted RBP9.07□□□□□ -0.96
TNFRSF1A-214ENST00000543048 KLHL1Q9NR64 748 aa9.07□□□□□ -0.96
TNFRSF1A-214ENST00000543048 ZNF446Q9NWS9 450 aa9.07□□□□□ -0.96
TNFRSF1A-214ENST00000543048 LYARQ9NX58 379 aaKnown RBP9.07□□□□□ -0.96
TNFRSF1A-214ENST00000543048 TBK1Q9UHD2 729 aa9.07□□□□□ -0.96
TNFRSF1A-214ENST00000543048 YARS2Q9Y2Z4 477 aaKnown RBP9.07□□□□□ -0.96
TNFRSF1A-214ENST00000543048 ATG4BQ9Y4P1 393 aa9.07□□□□□ -0.96
TNFRSF1A-214ENST00000543048 ASB4Q9Y574 426 aa9.07□□□□□ -0.96
TNFRSF1A-214ENST00000543048 CACNA1DQ01668 2161 aa9.07□□□□□ -0.96
TNFRSF1A-214ENST00000543048 ZNF407Q9C0G0 2248 aa9.07□□□□□ -0.96
TNFRSF1A-214ENST00000543048 A0A0A6YYD5 115 aa9.06□□□□□ -0.96
TNFRSF1A-214ENST00000543048 A0A1W2PPM1 405 aa9.06□□□□□ -0.96
TNFRSF1A-214ENST00000543048 C17orf105B2RV13 164 aa9.06□□□□□ -0.96
TNFRSF1A-214ENST00000543048 GOLGA8RI6L899 631 aa9.06□□□□□ -0.96
TNFRSF1A-214ENST00000543048 PPP6CO00743 305 aa9.06□□□□□ -0.96
TNFRSF1A-214ENST00000543048 ATP8B1O43520 1251 aa9.06□□□□□ -0.96
TNFRSF1A-214ENST00000543048 DLX3O60479 287 aa9.06□□□□□ -0.96
TNFRSF1A-214ENST00000543048 EEDO75530 441 aaKnown RBP9.06□□□□□ -0.96
TNFRSF1A-214ENST00000543048 NEURL1O76050 574 aa9.06□□□□□ -0.96
TNFRSF1A-214ENST00000543048 SUPT7LO94864 414 aa9.06□□□□□ -0.96
TNFRSF1A-214ENST00000543048 SEMA3DO95025 777 aa9.06□□□□□ -0.96
TNFRSF1A-214ENST00000543048 ETHE1O95571 254 aa9.06□□□□□ -0.96
TNFRSF1A-214ENST00000543048 GPR75O95800 540 aa9.06□□□□□ -0.96
TNFRSF1A-214ENST00000543048 FAM58BPP0C7Q3 252 aa9.06□□□□□ -0.96
TNFRSF1A-214ENST00000543048 ATP5F1P24539 256 aaPredicted RBP9.06□□□□□ -0.96
TNFRSF1A-214ENST00000543048 BUD31P41223 144 aaPredicted RBP9.06□□□□□ -0.96
TNFRSF1A-214ENST00000543048 STT3AP46977 705 aa9.06□□□□□ -0.96
TNFRSF1A-214ENST00000543048 PRKAA2P54646 552 aa9.06□□□□□ -0.96
TNFRSF1A-214ENST00000543048 HERVK_113P63132 956 aa9.06□□□□□ -0.96
TNFRSF1A-214ENST00000543048 IGLV3-21P80748 117 aaPredicted RBP9.06□□□□□ -0.96
TNFRSF1A-214ENST00000543048 ID2Q02363 134 aa9.06□□□□□ -0.96
TNFRSF1A-214ENST00000543048 MAPKAPK3Q16644 382 aa9.06□□□□□ -0.96
TNFRSF1A-214ENST00000543048 GGTA1PQ4G0N0 100 aa9.06□□□□□ -0.96
TNFRSF1A-214ENST00000543048 UNC50Q53HI1 259 aa9.06□□□□□ -0.96
TNFRSF1A-214ENST00000543048 SGO1Q5FBB7 561 aa9.06□□□□□ -0.96
TNFRSF1A-214ENST00000543048 ZNF678Q5SXM1 525 aa9.06□□□□□ -0.96
TNFRSF1A-214ENST00000543048 ZNF468Q5VIY5 522 aaPredicted RBP9.06□□□□□ -0.96
TNFRSF1A-214ENST00000543048 C18orf63Q68DL7 685 aa9.06□□□□□ -0.96
TNFRSF1A-214ENST00000543048 MRM1Q6IN84 353 aaKnown RBP9.06□□□□□ -0.96
TNFRSF1A-214ENST00000543048 HSDL2Q6YN16 418 aa9.06□□□□□ -0.96
TNFRSF1A-214ENST00000543048 RPS27LQ71UM5 84 aaKnown RBP9.06□□□□□ -0.96
TNFRSF1A-214ENST00000543048 SLC22A9Q8IVM8 553 aa9.06□□□□□ -0.96
TNFRSF1A-214ENST00000543048 OR4N5Q8IXE1 308 aa9.06□□□□□ -0.96
TNFRSF1A-214ENST00000543048 TMEM156Q8N614 296 aa9.06□□□□□ -0.96
TNFRSF1A-214ENST00000543048 TMEM178AQ8NBL3 297 aa9.06□□□□□ -0.96
TNFRSF1A-214ENST00000543048 TRPC4APQ8TEL6 797 aa9.06□□□□□ -0.96
TNFRSF1A-214ENST00000543048 SSC4DQ8WTU2 575 aa9.06□□□□□ -0.96
TNFRSF1A-214ENST00000543048 THAP3Q8WTV1 239 aaPredicted RBP9.06□□□□□ -0.96
TNFRSF1A-214ENST00000543048 MZB1Q8WU39 189 aa9.06□□□□□ -0.96
TNFRSF1A-214ENST00000543048 DGAT2Q96PD7 388 aa9.06□□□□□ -0.96
TNFRSF1A-214ENST00000543048 ERVK-6Q9BXR3 956 aa9.06□□□□□ -0.96
TNFRSF1A-214ENST00000543048 ZNF717Q9BY31 904 aaPredicted RBP9.06□□□□□ -0.96
TNFRSF1A-214ENST00000543048 ELOVL6Q9H5J4 265 aa9.06□□□□□ -0.96
TNFRSF1A-214ENST00000543048 VIPAS39Q9H9C1 493 aa9.06□□□□□ -0.96
TNFRSF1A-214ENST00000543048 PPCSQ9HAB8 311 aa9.06□□□□□ -0.96
TNFRSF1A-214ENST00000543048 WDR41Q9HAD4 459 aa9.06□□□□□ -0.96
TNFRSF1A-214ENST00000543048 NMRK1Q9NWW6 199 aa9.06□□□□□ -0.96
TNFRSF1A-214ENST00000543048 ZNF223Q9UK11 482 aaPredicted RBP9.06□□□□□ -0.96
TNFRSF1A-214ENST00000543048 ADAM29Q9UKF5 820 aa9.06□□□□□ -0.96
TNFRSF1A-214ENST00000543048 SNX6Q9UNH7 406 aa9.06□□□□□ -0.96
TNFRSF1A-214ENST00000543048 OSGIN2Q9Y236 505 aa9.06□□□□□ -0.96
TNFRSF1A-214ENST00000543048 SLC5A6Q9Y289 635 aa9.06□□□□□ -0.96
TNFRSF1A-214ENST00000543048 NBPF19A0A087WUL8 3843 aa9.05□□□□□ -0.96
TNFRSF1A-214ENST00000543048 A0A1W2PR48 441 aa9.05□□□□□ -0.96
TNFRSF1A-214ENST00000543048 WIPF3A6NGB9 483 aa9.05□□□□□ -0.96
TNFRSF1A-214ENST00000543048 DYRK3O43781 588 aa9.05□□□□□ -0.96
TNFRSF1A-214ENST00000543048 TMPRSS11DO60235 418 aa9.05□□□□□ -0.96
TNFRSF1A-214ENST00000543048 FGF17O60258 216 aa9.05□□□□□ -0.96
TNFRSF1A-214ENST00000543048 ITGA10O75578 1167 aa9.05□□□□□ -0.96
TNFRSF1A-214ENST00000543048 SLC25A12O75746 678 aa9.05□□□□□ -0.96
TNFRSF1A-214ENST00000543048 PDYNP01213 254 aa9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms