RNA–Protein interactions for RNA: ENST00000541341.5

CHFR-219, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 3

Gene CHFR, Length 581 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-219ENST00000541341 MND1Q9BWT6 205 aa9.94□□□□□ -0.82
CHFR-219ENST00000541341 IL21RQ9HBE5 538 aa9.94□□□□□ -0.82
CHFR-219ENST00000541341 CAPN10Q9HC96 672 aa9.94□□□□□ -0.82
CHFR-219ENST00000541341 SLC25A37Q9NYZ2 338 aa9.94□□□□□ -0.82
CHFR-219ENST00000541341 VPS51Q9UID3 782 aa9.94□□□□□ -0.82
CHFR-219ENST00000541341 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP9.94□□□□□ -0.82
CHFR-219ENST00000541341 SLC27A6Q9Y2P4 619 aa9.94□□□□□ -0.82
CHFR-219ENST00000541341 RPL36Q9Y3U8 105 aaKnown RBP9.94□□□□□ -0.82
CHFR-219ENST00000541341 ZNF451Q9Y4E5 1061 aa9.94□□□□□ -0.82
CHFR-219ENST00000541341 PCDHB11Q9Y5F2 797 aa9.94□□□□□ -0.82
CHFR-219ENST00000541341 MAGED1Q9Y5V3 778 aaPredicted RBP9.94□□□□□ -0.82
CHFR-219ENST00000541341 LOC400499M0QZD8 3231 aa9.93□□□□□ -0.82
CHFR-219ENST00000541341 A0A1W2PQ67 120 aa9.93□□□□□ -0.82
CHFR-219ENST00000541341 QSOX1O00391 747 aa9.93□□□□□ -0.82
CHFR-219ENST00000541341 ARHGAP33O14559 1287 aa9.93□□□□□ -0.82
CHFR-219ENST00000541341 FPGTO14772 594 aa9.93□□□□□ -0.82
CHFR-219ENST00000541341 TSPAN3O60637 253 aa9.93□□□□□ -0.82
CHFR-219ENST00000541341 TBL1XO60907 577 aa9.93□□□□□ -0.82
CHFR-219ENST00000541341 WBP4O75554 376 aaKnown RBP9.93□□□□□ -0.82
CHFR-219ENST00000541341 ALPPP05187 535 aa9.93□□□□□ -0.82
CHFR-219ENST00000541341 SCG5P05408 212 aa9.93□□□□□ -0.82
CHFR-219ENST00000541341 PRDX3P30048 256 aaKnown RBP9.93□□□□□ -0.82
CHFR-219ENST00000541341 CSTF2P33240 577 aaKnown RBP eCLIP9.93□□□□□ -0.82
CHFR-219ENST00000541341 HMGCLP35914 325 aa9.93□□□□□ -0.82
CHFR-219ENST00000541341 LIPAP38571 399 aa9.93□□□□□ -0.82
CHFR-219ENST00000541341 DGKGP49619 791 aa9.93□□□□□ -0.82
CHFR-219ENST00000541341 HK3P52790 923 aa9.93□□□□□ -0.82
CHFR-219ENST00000541341 IST1P53990 364 aa9.93□□□□□ -0.82
CHFR-219ENST00000541341 AP1S1P61966 158 aa9.93□□□□□ -0.82
CHFR-219ENST00000541341 SELENOWP63302 87 aa9.93□□□□□ -0.82
CHFR-219ENST00000541341 PIGFQ07326 219 aa9.93□□□□□ -0.82
CHFR-219ENST00000541341 GBX1Q14549 363 aa9.93□□□□□ -0.82
CHFR-219ENST00000541341 NKG7Q16617 165 aa9.93□□□□□ -0.82
CHFR-219ENST00000541341 TMEM44Q2T9K0 475 aa9.93□□□□□ -0.82
CHFR-219ENST00000541341 CATSPEREQ5SY80 951 aa9.93□□□□□ -0.82
CHFR-219ENST00000541341 PLAG1Q6DJT9 500 aa9.93□□□□□ -0.82
CHFR-219ENST00000541341 CXorf57Q6NSI4 855 aaKnown RBP9.93□□□□□ -0.82
CHFR-219ENST00000541341 MZT2AQ6P582 158 aa9.93□□□□□ -0.82
CHFR-219ENST00000541341 TRIM40Q6P9F5 258 aa9.93□□□□□ -0.82
CHFR-219ENST00000541341 SBSNQ6UWP8 590 aa9.93□□□□□ -0.82
CHFR-219ENST00000541341 SLC36A4Q6YBV0 504 aa9.93□□□□□ -0.82
CHFR-219ENST00000541341 TRMT11Q7Z4G4 463 aaKnown RBP9.93□□□□□ -0.82
CHFR-219ENST00000541341 CAMKMTQ7Z624 323 aa9.93□□□□□ -0.82
CHFR-219ENST00000541341 GALNT5Q7Z7M9 940 aa9.93□□□□□ -0.82
CHFR-219ENST00000541341 TMEM179BQ7Z7N9 219 aa9.93□□□□□ -0.82
CHFR-219ENST00000541341 FAM124AQ86V42 546 aa9.93□□□□□ -0.82
CHFR-219ENST00000541341 CCDC28AQ8IWP9 274 aa9.93□□□□□ -0.82
CHFR-219ENST00000541341 MSRB3Q8IXL7 192 aa9.93□□□□□ -0.82
CHFR-219ENST00000541341 PGBD5Q8N414 524 aa9.93□□□□□ -0.82
CHFR-219ENST00000541341 ZBTB2Q8N680 514 aa9.93□□□□□ -0.82
CHFR-219ENST00000541341 FAM86B1Q8N7N1 296 aa9.93□□□□□ -0.82
CHFR-219ENST00000541341 FAM181AQ8N9Y4 354 aa9.93□□□□□ -0.82
CHFR-219ENST00000541341 L3MBTL4Q8NA19 623 aa9.93□□□□□ -0.82
CHFR-219ENST00000541341 SIDT2Q8NBJ9 832 aaKnown RBP9.93□□□□□ -0.82
CHFR-219ENST00000541341 PSD4Q8NDX1 1056 aa9.93□□□□□ -0.82
CHFR-219ENST00000541341 FAM46DQ8NEK8 389 aa9.93□□□□□ -0.82
CHFR-219ENST00000541341 SELENOMQ8WWX9 145 aa9.93□□□□□ -0.82
CHFR-219ENST00000541341 SORCS1Q8WY21 1168 aa9.93□□□□□ -0.82
CHFR-219ENST00000541341 GGHQ92820 318 aa9.93□□□□□ -0.82
CHFR-219ENST00000541341 REPS1Q96D71 796 aa9.93□□□□□ -0.82
CHFR-219ENST00000541341 ZNF419Q96HQ0 510 aaPredicted RBP9.93□□□□□ -0.82
CHFR-219ENST00000541341 HSH2DQ96JZ2 352 aa9.93□□□□□ -0.82
CHFR-219ENST00000541341 FCRL1Q96LA6 429 aa9.93□□□□□ -0.82
CHFR-219ENST00000541341 TEFMQ96QE5 360 aaKnown RBP9.93□□□□□ -0.82
CHFR-219ENST00000541341 MGLLQ99685 303 aa9.93□□□□□ -0.82
CHFR-219ENST00000541341 TMEM246Q9BRR3 403 aa9.93□□□□□ -0.82
CHFR-219ENST00000541341 GPR174Q9BXC1 333 aa9.93□□□□□ -0.82
CHFR-219ENST00000541341 PRRG3Q9BZD7 231 aa9.93□□□□□ -0.82
CHFR-219ENST00000541341 BRF2Q9HAW0 419 aa9.93□□□□□ -0.82
CHFR-219ENST00000541341 ZBTB20Q9HC78 741 aaPredicted RBP9.93□□□□□ -0.82
CHFR-219ENST00000541341 SMURF1Q9HCE7 757 aa9.93□□□□□ -0.82
CHFR-219ENST00000541341 PCDH12Q9NPG4 1184 aa9.93□□□□□ -0.82
CHFR-219ENST00000541341 VPS4AQ9UN37 437 aa9.93□□□□□ -0.82
CHFR-219ENST00000541341 GSTK1Q9Y2Q3 226 aa9.93□□□□□ -0.82
CHFR-219ENST00000541341 MED16Q9Y2X0 877 aa9.93□□□□□ -0.82
CHFR-219ENST00000541341 MSRB2Q9Y3D2 182 aa9.93□□□□□ -0.82
CHFR-219ENST00000541341 CMAHPQ9Y471 501 aa9.93□□□□□ -0.82
CHFR-219ENST00000541341 NEUROG3Q9Y4Z2 214 aa9.93□□□□□ -0.82
CHFR-219ENST00000541341 PCDHB9Q9Y5E1 797 aa9.93□□□□□ -0.82
CHFR-219ENST00000541341 PCDHGA6Q9Y5G7 932 aa9.93□□□□□ -0.82
CHFR-219ENST00000541341 U3KQV3 271 aa9.93□□□□□ -0.82
CHFR-219ENST00000541341 ANKRD12Q6UB98 2062 aa9.93□□□□□ -0.82
CHFR-219ENST00000541341 ITPR1Q14643 2758 aa9.92□□□□□ -0.82
CHFR-219ENST00000541341 FAM208BQ5VWN6 2430 aa9.92□□□□□ -0.82
CHFR-219ENST00000541341 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP9.92□□□□□ -0.82
CHFR-219ENST00000541341 MEIOCA2RUB1 952 aa9.92□□□□□ -0.82
CHFR-219ENST00000541341 B8ZZF3 427 aa9.92□□□□□ -0.82
CHFR-219ENST00000541341 M0R082 166 aa9.92□□□□□ -0.82
CHFR-219ENST00000541341 KIAA0513O60268 411 aa9.92□□□□□ -0.82
CHFR-219ENST00000541341 PCDHGA12O60330 932 aa9.92□□□□□ -0.82
CHFR-219ENST00000541341 LCKP06239 509 aa9.92□□□□□ -0.82
CHFR-219ENST00000541341 CISD3P0C7P0 127 aa9.92□□□□□ -0.82
CHFR-219ENST00000541341 MPC1LP0DKB6 136 aa9.92□□□□□ -0.82
CHFR-219ENST00000541341 ADORA3P0DMS8 318 aa9.92□□□□□ -0.82
CHFR-219ENST00000541341 PRKAR1AP10644 381 aa9.92□□□□□ -0.82
CHFR-219ENST00000541341 HOXB9P17482 250 aaPredicted RBP9.92□□□□□ -0.82
CHFR-219ENST00000541341 CYP2A7P20853 494 aa9.92□□□□□ -0.82
CHFR-219ENST00000541341 CXCR2P25025 360 aa9.92□□□□□ -0.82
CHFR-219ENST00000541341 ITGB7P26010 798 aa9.92□□□□□ -0.82
CHFR-219ENST00000541341 SDC2P34741 201 aa9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms