RNA–Protein interactions for RNA: ENST00000540798.5

RTN3-210, Transcript of reticulon 3, humanhuman

TSL 1 (best) BASIC

Gene RTN3, Length 3,124 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-210ENST00000540798 MRGPRX1Q96LB2 322 aa13.06□□□□□ -0.32
RTN3-210ENST00000540798 PIP5K1AQ99755 562 aa13.06□□□□□ -0.32
RTN3-210ENST00000540798 GDF15Q99988 308 aa13.06□□□□□ -0.32
RTN3-210ENST00000540798 C17orf62Q9BQA9 187 aa13.06□□□□□ -0.32
RTN3-210ENST00000540798 ACER3Q9NUN7 267 aa13.06□□□□□ -0.32
RTN3-210ENST00000540798 ZSCAN32Q9NX65 697 aa13.06□□□□□ -0.32
RTN3-210ENST00000540798 PCDHGA6Q9Y5G7 932 aa13.06□□□□□ -0.32
RTN3-210ENST00000540798 DGKBQ9Y6T7 804 aa13.06□□□□□ -0.32
RTN3-210ENST00000540798 ENPP4Q9Y6X5 453 aa13.06□□□□□ -0.32
RTN3-210ENST00000540798 COLEC10Q9Y6Z7 277 aa13.06□□□□□ -0.32
RTN3-210ENST00000540798 UNC80Q8N2C7 3258 aa13.06□□□□□ -0.32
RTN3-210ENST00000540798 ARRDC5A6NEK1 342 aa13.06□□□□□ -0.32
RTN3-210ENST00000540798 MAN2B1O00754 1011 aa13.06□□□□□ -0.32
RTN3-210ENST00000540798 KDM1AO60341 852 aa13.06□□□□□ -0.32
RTN3-210ENST00000540798 EML2O95834 649 aa13.06□□□□□ -0.32
RTN3-210ENST00000540798 CD6P30203 668 aa13.06□□□□□ -0.32
RTN3-210ENST00000540798 HOXD11P31277 338 aaPredicted RBP13.06□□□□□ -0.32
RTN3-210ENST00000540798 GRK3P35626 688 aa13.06□□□□□ -0.32
RTN3-210ENST00000540798 TSFMP43897 325 aaKnown RBP13.06□□□□□ -0.32
RTN3-210ENST00000540798 KRT33BQ14525 404 aa13.06□□□□□ -0.32
RTN3-210ENST00000540798 TPRG1LQ5T0D9 272 aa13.06□□□□□ -0.32
RTN3-210ENST00000540798 NDUFAF5Q5TEU4 345 aa13.06□□□□□ -0.32
RTN3-210ENST00000540798 ADCK2Q7Z695 626 aa13.06□□□□□ -0.32
RTN3-210ENST00000540798 FAM20CQ8IXL6 584 aa13.06□□□□□ -0.32
RTN3-210ENST00000540798 BPIFB6Q8NFQ5 453 aa13.06□□□□□ -0.32
RTN3-210ENST00000540798 APH1BQ8WW43 257 aa13.06□□□□□ -0.32
RTN3-210ENST00000540798 FKBP10Q96AY3 582 aa13.06□□□□□ -0.32
RTN3-210ENST00000540798 EXOSC8Q96B26 276 aaKnown RBP13.06□□□□□ -0.32
RTN3-210ENST00000540798 AMDHD1Q96NU7 426 aa13.06□□□□□ -0.32
RTN3-210ENST00000540798 SIGLEC11Q96RL6 698 aa13.06□□□□□ -0.32
RTN3-210ENST00000540798 APBB3O95704 486 aa13.06□□□□□ -0.32
RTN3-210ENST00000540798 ANXA8P13928 327 aa13.06□□□□□ -0.32
RTN3-210ENST00000540798 SSR2P43308 183 aa13.06□□□□□ -0.32
RTN3-210ENST00000540798 PLA2G16P53816 162 aa13.06□□□□□ -0.32
RTN3-210ENST00000540798 PIGFQ07326 219 aa13.06□□□□□ -0.32
RTN3-210ENST00000540798 PROX2Q3B8N5 592 aa13.06□□□□□ -0.32
RTN3-210ENST00000540798 ZNF362Q5T0B9 420 aaPredicted RBP13.06□□□□□ -0.32
RTN3-210ENST00000540798 SLC5A8Q8N695 610 aa13.06□□□□□ -0.32
RTN3-210ENST00000540798 SMYD1Q8NB12 490 aa13.06□□□□□ -0.32
RTN3-210ENST00000540798 OR10G2Q8NGC3 310 aa13.06□□□□□ -0.32
RTN3-210ENST00000540798 BMFQ96LC9 184 aa13.06□□□□□ -0.32
RTN3-210ENST00000540798 FEVQ99581 238 aa13.06□□□□□ -0.32
RTN3-210ENST00000540798 GLIPR2Q9H4G4 154 aa13.06□□□□□ -0.32
RTN3-210ENST00000540798 GPN2Q9H9Y4 310 aaPredicted RBP13.06□□□□□ -0.32
RTN3-210ENST00000540798 OR6C2Q9NZP2 312 aa13.06□□□□□ -0.32
RTN3-210ENST00000540798 MOSPD1Q9UJG1 213 aa13.06□□□□□ -0.32
RTN3-210ENST00000540798 NCKAP1Q9Y2A7 1128 aa13.06□□□□□ -0.32
RTN3-210ENST00000540798 ZNF451Q9Y4E5 1061 aa13.06□□□□□ -0.32
RTN3-210ENST00000540798 PCDHGA2Q9Y5H1 932 aa13.06□□□□□ -0.32
RTN3-210ENST00000540798 A0A0J9YVX5 310 aa13.05□□□□□ -0.32
RTN3-210ENST00000540798 A6NCN8 305 aa13.05□□□□□ -0.32
RTN3-210ENST00000540798 XPNPEP2O43895 674 aa13.05□□□□□ -0.32
RTN3-210ENST00000540798 WBP4O75554 376 aaKnown RBP13.05□□□□□ -0.32
RTN3-210ENST00000540798 MFN2O95140 757 aa13.05□□□□□ -0.32
RTN3-210ENST00000540798 RHCEP18577 417 aa13.05□□□□□ -0.32
RTN3-210ENST00000540798 HIST1H1TP22492 207 aaPredicted RBP13.05□□□□□ -0.32
RTN3-210ENST00000540798 NDUFS1P28331 727 aa13.05□□□□□ -0.32
RTN3-210ENST00000540798 HOXD12P35452 270 aa13.05□□□□□ -0.32
RTN3-210ENST00000540798 CLDN2P57739 230 aa13.05□□□□□ -0.32
RTN3-210ENST00000540798 RPS26P62854 115 aaKnown RBP13.05□□□□□ -0.32
RTN3-210ENST00000540798 SPIBQ01892 262 aa13.05□□□□□ -0.32
RTN3-210ENST00000540798 HSPB3Q12988 150 aa13.05□□□□□ -0.32
RTN3-210ENST00000540798 PUM1Q14671 1186 aaKnown RBP eCLIP13.05□□□□□ -0.32
RTN3-210ENST00000540798 COL19A1Q14993 1142 aa13.05□□□□□ -0.32
RTN3-210ENST00000540798 DUSP7Q16829 419 aa13.05□□□□□ -0.32
RTN3-210ENST00000540798 EXOC3L2Q2M3D2 409 aa13.05□□□□□ -0.32
RTN3-210ENST00000540798 SMUG1Q53HV7 270 aa13.05□□□□□ -0.32
RTN3-210ENST00000540798 C16orf87Q6PH81 154 aa13.05□□□□□ -0.32
RTN3-210ENST00000540798 OR2L5Q8NG80 312 aa13.05□□□□□ -0.32
RTN3-210ENST00000540798 TMEM19Q96HH6 336 aa13.05□□□□□ -0.32
RTN3-210ENST00000540798 KCNC2Q96PR1 638 aa13.05□□□□□ -0.32
RTN3-210ENST00000540798 CD93Q9NPY3 652 aa13.05□□□□□ -0.32
RTN3-210ENST00000540798 SLC35C2Q9NQQ7 365 aa13.05□□□□□ -0.32
RTN3-210ENST00000540798 CHRM5P08912 532 aaPredicted RBP13.05□□□□□ -0.32
RTN3-210ENST00000540798 CD72P21854 359 aa13.05□□□□□ -0.32
RTN3-210ENST00000540798 CMPK1P30085 196 aa13.05□□□□□ -0.32
RTN3-210ENST00000540798 FMO3P31513 532 aa13.05□□□□□ -0.32
RTN3-210ENST00000540798 GP2P55259 537 aaKnown RBP13.05□□□□□ -0.32
RTN3-210ENST00000540798 KCNC4Q03721 635 aa13.05□□□□□ -0.32
RTN3-210ENST00000540798 TMEM64Q6YI46 380 aa13.05□□□□□ -0.32
RTN3-210ENST00000540798 PAQR7Q86WK9 346 aa13.05□□□□□ -0.32
RTN3-210ENST00000540798 ENTHD1Q8IYW4 607 aa13.05□□□□□ -0.32
RTN3-210ENST00000540798 GPR32P1Q8NGA4 272 aa13.05□□□□□ -0.32
RTN3-210ENST00000540798 FLVCR1-AS1Q8TAF5 88 aa13.05□□□□□ -0.32
RTN3-210ENST00000540798 FAR1Q8WVX9 515 aa13.05□□□□□ -0.32
RTN3-210ENST00000540798 GAB3Q8WWW8 586 aa13.05□□□□□ -0.32
RTN3-210ENST00000540798 WDR92Q96MX6 357 aa13.05□□□□□ -0.32
RTN3-210ENST00000540798 FAIM2Q9BWQ8 316 aa13.05□□□□□ -0.32
RTN3-210ENST00000540798 RLIMQ9NVW2 624 aa13.05□□□□□ -0.32
RTN3-210ENST00000540798 CES1P1Q9UKY3 287 aa13.05□□□□□ -0.32
RTN3-210ENST00000540798 RAB23Q9ULC3 237 aa13.05□□□□□ -0.32
RTN3-210ENST00000540798 PNMA8BQ9ULN7 279 aaPredicted RBP13.05□□□□□ -0.32
RTN3-210ENST00000540798 POFUT2Q9Y2G5 429 aa13.05□□□□□ -0.32
RTN3-210ENST00000540798 TPRKBQ9Y3C4 175 aa13.05□□□□□ -0.32
RTN3-210ENST00000540798 PCDHGA10Q9Y5H3 936 aa13.05□□□□□ -0.32
RTN3-210ENST00000540798 HEMK1Q9Y5R4 338 aaPredicted RBP13.05□□□□□ -0.32
RTN3-210ENST00000540798 CEP290O15078 2479 aa13.04□□□□□ -0.32
RTN3-210ENST00000540798 MYO10Q9HD67 2058 aa13.04□□□□□ -0.32
RTN3-210ENST00000540798 J3KTA2 159 aa13.04□□□□□ -0.32
RTN3-210ENST00000540798 ATP5A1P25705 553 aaKnown RBP13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms