RNA–Protein interactions for RNA: ENST00000540060.1

LPCAT3-209, Transcript of lysophosphatidylcholine acyltransferase 3, humanhuman

TSL 4

Gene LPCAT3, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT3-209ENST00000540060 SFT2D3Q587I9 215 aa6.54□□□□□ -1.36
LPCAT3-209ENST00000540060 SPDYAQ5MJ70 313 aa6.54□□□□□ -1.36
LPCAT3-209ENST00000540060 CCNYL2Q5T2Q4 361 aa6.54□□□□□ -1.36
LPCAT3-209ENST00000540060 NDUFAF5Q5TEU4 345 aa6.54□□□□□ -1.36
LPCAT3-209ENST00000540060 ATG16L1Q676U5 607 aa6.54□□□□□ -1.36
LPCAT3-209ENST00000540060 OR52E8Q6IFG1 317 aa6.54□□□□□ -1.36
LPCAT3-209ENST00000540060 NDUFAF7Q7L592 441 aa6.54□□□□□ -1.36
LPCAT3-209ENST00000540060 CPEB2Q7Z5Q1 589 aaKnown RBP6.54□□□□□ -1.36
LPCAT3-209ENST00000540060 CLNKQ7Z7G1 428 aa6.54□□□□□ -1.36
LPCAT3-209ENST00000540060 TRIM42Q8IWZ5 723 aa6.54□□□□□ -1.36
LPCAT3-209ENST00000540060 DDIASQ8IXT1 998 aa6.54□□□□□ -1.36
LPCAT3-209ENST00000540060 KIRREL3Q8IZU9 778 aa6.54□□□□□ -1.36
LPCAT3-209ENST00000540060 CLEC1AQ8NC01 280 aa6.54□□□□□ -1.36
LPCAT3-209ENST00000540060 C19orf60Q96EN9 201 aa6.54□□□□□ -1.36
LPCAT3-209ENST00000540060 METTL2AQ96IZ6 378 aaKnown RBP6.54□□□□□ -1.36
LPCAT3-209ENST00000540060 VPS50Q96JG6 964 aa6.54□□□□□ -1.36
LPCAT3-209ENST00000540060 FCRL1Q96LA6 429 aa6.54□□□□□ -1.36
LPCAT3-209ENST00000540060 IMMP1LQ96LU5 166 aa6.54□□□□□ -1.36
LPCAT3-209ENST00000540060 FER1L6-AS2Q96M78 137 aa6.54□□□□□ -1.36
LPCAT3-209ENST00000540060 PTCHD1Q96NR3 888 aa6.54□□□□□ -1.36
LPCAT3-209ENST00000540060 TUBB6Q9BUF5 446 aa6.54□□□□□ -1.36
LPCAT3-209ENST00000540060 EBPLQ9BY08 206 aa6.54□□□□□ -1.36
LPCAT3-209ENST00000540060 ILKAPQ9H0C8 392 aaPredicted RBP6.54□□□□□ -1.36
LPCAT3-209ENST00000540060 RPF2Q9H7B2 306 aaKnown RBP6.54□□□□□ -1.36
LPCAT3-209ENST00000540060 MANSC1Q9H8J5 431 aa6.54□□□□□ -1.36
LPCAT3-209ENST00000540060 LRTM1Q9HBL6 345 aa6.54□□□□□ -1.36
LPCAT3-209ENST00000540060 ZNF160Q9HCG1 818 aa6.54□□□□□ -1.36
LPCAT3-209ENST00000540060 RIC8BQ9NVN3 520 aa6.54□□□□□ -1.36
LPCAT3-209ENST00000540060 EPB41L3Q9Y2J2 1087 aaPredicted RBP6.54□□□□□ -1.36
LPCAT3-209ENST00000540060 NSG1A0A0A6YYJ2 146 aa6.53□□□□□ -1.36
LPCAT3-209ENST00000540060 ATP6AP2A0A1C7CYW4 349 aa6.53□□□□□ -1.36
LPCAT3-209ENST00000540060 GNG14A0A1W2PPG7 69 aa6.53□□□□□ -1.36
LPCAT3-209ENST00000540060 C1orf226A1L170 272 aa6.53□□□□□ -1.36
LPCAT3-209ENST00000540060 SAGE2PA6NJ88 616 aa6.53□□□□□ -1.36
LPCAT3-209ENST00000540060 GLOD5A6NK44 160 aa6.53□□□□□ -1.36
LPCAT3-209ENST00000540060 GUCY1B2O75343 617 aa6.53□□□□□ -1.36
LPCAT3-209ENST00000540060 ATP6AP2O75787 350 aa6.53□□□□□ -1.36
LPCAT3-209ENST00000540060 CELA2AP08217 269 aa6.53□□□□□ -1.36
LPCAT3-209ENST00000540060 IL3P08700 152 aa6.53□□□□□ -1.36
LPCAT3-209ENST00000540060 ANXA4P09525 319 aaPredicted RBP6.53□□□□□ -1.36
LPCAT3-209ENST00000540060 FAM87AP0C7U9 286 aa6.53□□□□□ -1.36
LPCAT3-209ENST00000540060 PPP2R1BP30154 601 aa6.53□□□□□ -1.36
LPCAT3-209ENST00000540060 TLX1P31314 330 aaPredicted RBP6.53□□□□□ -1.36
LPCAT3-209ENST00000540060 GSTM5P46439 218 aa6.53□□□□□ -1.36
LPCAT3-209ENST00000540060 RPL14P50914 215 aaKnown RBP6.53□□□□□ -1.36
LPCAT3-209ENST00000540060 HK2P52789 917 aa6.53□□□□□ -1.36
LPCAT3-209ENST00000540060 OR4D2P58180 307 aa6.53□□□□□ -1.36
LPCAT3-209ENST00000540060 ID2Q02363 134 aa6.53□□□□□ -1.36
LPCAT3-209ENST00000540060 FOLH1Q04609 750 aa6.53□□□□□ -1.36
LPCAT3-209ENST00000540060 BTKQ06187 659 aa6.53□□□□□ -1.36
LPCAT3-209ENST00000540060 ZNF763Q0D2J5 394 aa6.53□□□□□ -1.36
LPCAT3-209ENST00000540060 AIMP2Q13155 320 aaKnown RBP6.53□□□□□ -1.36
LPCAT3-209ENST00000540060 KCNAB2Q13303 367 aa6.53□□□□□ -1.36
LPCAT3-209ENST00000540060 NR6A1Q15406 480 aa6.53□□□□□ -1.36
LPCAT3-209ENST00000540060 TERF2Q15554 542 aa6.53□□□□□ -1.36
LPCAT3-209ENST00000540060 PDCD2Q16342 344 aaPredicted RBP6.53□□□□□ -1.36
LPCAT3-209ENST00000540060 GALNTL6Q49A17 601 aa6.53□□□□□ -1.36
LPCAT3-209ENST00000540060 PLAG1Q6DJT9 500 aa6.53□□□□□ -1.36
LPCAT3-209ENST00000540060 NOXRED1Q6NXP6 359 aa6.53□□□□□ -1.36
LPCAT3-209ENST00000540060 SLC48A1Q6P1K1 146 aa6.53□□□□□ -1.36
LPCAT3-209ENST00000540060 PAPD4Q6PIY7 484 aaKnown RBP6.53□□□□□ -1.36
LPCAT3-209ENST00000540060 MMP21Q8N119 569 aa6.53□□□□□ -1.36
LPCAT3-209ENST00000540060 GALNT16Q8N428 558 aa6.53□□□□□ -1.36
LPCAT3-209ENST00000540060 AMER2Q8N7J2 671 aa6.53□□□□□ -1.36
LPCAT3-209ENST00000540060 FAM76AQ8TAV0 307 aa6.53□□□□□ -1.36
LPCAT3-209ENST00000540060 PUM2Q8TB72 1066 aaKnown RBP eCLIP6.53□□□□□ -1.36
LPCAT3-209ENST00000540060 DNAJB14Q8TBM8 379 aa6.53□□□□□ -1.36
LPCAT3-209ENST00000540060 ZNF75CPQ92670 426 aaPredicted RBP6.53□□□□□ -1.36
LPCAT3-209ENST00000540060 TANKQ92844 425 aa6.53□□□□□ -1.36
LPCAT3-209ENST00000540060 UCN3Q969E3 161 aa6.53□□□□□ -1.36
LPCAT3-209ENST00000540060 ANKRD9Q96BM1 317 aaPredicted RBP6.53□□□□□ -1.36
LPCAT3-209ENST00000540060 TM4SF18Q96CE8 201 aa6.53□□□□□ -1.36
LPCAT3-209ENST00000540060 WBP1Q96G27 269 aa6.53□□□□□ -1.36
LPCAT3-209ENST00000540060 C3orf30Q96M34 536 aa6.53□□□□□ -1.36
LPCAT3-209ENST00000540060 UBL7Q96S82 380 aaPredicted RBP6.53□□□□□ -1.36
LPCAT3-209ENST00000540060 LPAR4Q99677 370 aa6.53□□□□□ -1.36
LPCAT3-209ENST00000540060 CCT7Q99832 543 aa6.53□□□□□ -1.36
LPCAT3-209ENST00000540060 ADNPQ9H2P0 1102 aa6.53□□□□□ -1.36
LPCAT3-209ENST00000540060 WDR41Q9HAD4 459 aa6.53□□□□□ -1.36
LPCAT3-209ENST00000540060 MYNNQ9NPC7 610 aa6.53□□□□□ -1.36
LPCAT3-209ENST00000540060 ADAP2Q9NPF8 381 aa6.53□□□□□ -1.36
LPCAT3-209ENST00000540060 MED4Q9NPJ6 270 aa6.53□□□□□ -1.36
LPCAT3-209ENST00000540060 ATP13A2Q9NQ11 1180 aa6.53□□□□□ -1.36
LPCAT3-209ENST00000540060 INTS9Q9NV88 658 aaKnown RBP6.53□□□□□ -1.36
LPCAT3-209ENST00000540060 PNPOQ9NVS9 261 aa6.53□□□□□ -1.36
LPCAT3-209ENST00000540060 THAP1Q9NVV9 213 aa6.53□□□□□ -1.36
LPCAT3-209ENST00000540060 C1orf109Q9NX04 203 aa6.53□□□□□ -1.36
LPCAT3-209ENST00000540060 HEY2Q9UBP5 337 aa6.53□□□□□ -1.36
LPCAT3-209ENST00000540060 GIMAP2Q9UG22 337 aa6.53□□□□□ -1.36
LPCAT3-209ENST00000540060 TUBD1Q9UJT1 453 aa6.53□□□□□ -1.36
LPCAT3-209ENST00000540060 CES1P1Q9UKY3 287 aa6.53□□□□□ -1.36
LPCAT3-209ENST00000540060 DLGAP4Q9Y2H0 992 aa6.53□□□□□ -1.36
LPCAT3-209ENST00000540060 TMED5Q9Y3A6 229 aa6.53□□□□□ -1.36
LPCAT3-209ENST00000540060 POLR3HQ9Y535 204 aaPredicted RBP6.53□□□□□ -1.36
LPCAT3-209ENST00000540060 PCDHGA9Q9Y5G4 932 aaKnown RBP6.53□□□□□ -1.36
LPCAT3-209ENST00000540060 PCDHA9Q9Y5H5 950 aa6.53□□□□□ -1.36
LPCAT3-209ENST00000540060 MYOCOSA0A1B0GUC4 107 aa6.52□□□□□ -1.37
LPCAT3-209ENST00000540060 A0A1W2PS29 197 aa6.52□□□□□ -1.37
LPCAT3-209ENST00000540060 WASHC1A8K0Z3 465 aa6.52□□□□□ -1.37
LPCAT3-209ENST00000540060 DYNC1I1O14576 645 aa6.52□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms