RNA–Protein interactions for RNA: ENST00000538834.5

CD9-208, Transcript of CD9 molecule, humanhuman

TSL 5

Gene CD9, Length 564 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-208ENST00000538834 TRA2BP62995 288 aaKnown RBP12.78□□□□□ -0.36
CD9-208ENST00000538834 IFFO1Q0D2I5 559 aa12.78□□□□□ -0.36
CD9-208ENST00000538834 SLC13A2Q13183 592 aa12.78□□□□□ -0.36
CD9-208ENST00000538834 ZNF169Q14929 603 aaPredicted RBP12.78□□□□□ -0.36
CD9-208ENST00000538834 TLR1Q15399 786 aa12.78□□□□□ -0.36
CD9-208ENST00000538834 INPP5JQ15735 1006 aaPredicted RBP12.78□□□□□ -0.36
CD9-208ENST00000538834 MEP1AQ16819 746 aa12.78□□□□□ -0.36
CD9-208ENST00000538834 UGT3A2Q3SY77 523 aa12.78□□□□□ -0.36
CD9-208ENST00000538834 LRIG3Q6UXM1 1119 aa12.78□□□□□ -0.36
CD9-208ENST00000538834 DGAT2L6Q6ZPD8 337 aa12.78□□□□□ -0.36
CD9-208ENST00000538834 LINC00696Q6ZRV3 163 aa12.78□□□□□ -0.36
CD9-208ENST00000538834 TMEM132CQ8N3T6 1108 aa12.78□□□□□ -0.36
CD9-208ENST00000538834 OR8K3Q8NH51 312 aa12.78□□□□□ -0.36
CD9-208ENST00000538834 METTL6Q8TCB7 284 aa12.78□□□□□ -0.36
CD9-208ENST00000538834 ZNF721Q8TF20 911 aa12.78□□□□□ -0.36
CD9-208ENST00000538834 SNRNP40Q96DI7 357 aaKnown RBP12.78□□□□□ -0.36
CD9-208ENST00000538834 CNDP1Q96KN2 507 aa12.78□□□□□ -0.36
CD9-208ENST00000538834 KCNA7Q96RP8 456 aa12.78□□□□□ -0.36
CD9-208ENST00000538834 TRMOQ9BU70 441 aa12.78□□□□□ -0.36
CD9-208ENST00000538834 KCNK13Q9HB14 408 aa12.78□□□□□ -0.36
CD9-208ENST00000538834 MID1IP1Q9NPA3 183 aa12.78□□□□□ -0.36
CD9-208ENST00000538834 AHSPQ9NZD4 102 aa12.78□□□□□ -0.36
CD9-208ENST00000538834 TIMM22Q9Y584 194 aa12.78□□□□□ -0.36
CD9-208ENST00000538834 ACTL7BQ9Y614 415 aa12.78□□□□□ -0.36
CD9-208ENST00000538834 COL12A1Q99715 3063 aa12.78□□□□□ -0.36
CD9-208ENST00000538834 DIDO1Q9BTC0 2240 aaKnown RBP12.77□□□□□ -0.36
CD9-208ENST00000538834 OR5H15A6NDH6 313 aa12.77□□□□□ -0.37
CD9-208ENST00000538834 PRKNO60260 465 aaPredicted RBP12.77□□□□□ -0.37
CD9-208ENST00000538834 NPHS1O60500 1241 aa12.77□□□□□ -0.37
CD9-208ENST00000538834 PRKRAO75569 313 aaKnown RBP12.77□□□□□ -0.37
CD9-208ENST00000538834 MYO1DO94832 1006 aa12.77□□□□□ -0.37
CD9-208ENST00000538834 FOLH1Q04609 750 aa12.77□□□□□ -0.37
CD9-208ENST00000538834 KIAA0040Q15053 153 aa12.77□□□□□ -0.37
CD9-208ENST00000538834 IGFBP7Q16270 282 aa12.77□□□□□ -0.37
CD9-208ENST00000538834 SPRED3Q2MJR0 410 aa12.77□□□□□ -0.37
CD9-208ENST00000538834 PRR30Q53SZ7 412 aaPredicted RBP12.77□□□□□ -0.37
CD9-208ENST00000538834 CES4AQ5XG92 561 aa12.77□□□□□ -0.37
CD9-208ENST00000538834 TTC19Q6DKK2 380 aaPredicted RBP12.77□□□□□ -0.37
CD9-208ENST00000538834 PAGE2Q7Z2X7 111 aa12.77□□□□□ -0.37
CD9-208ENST00000538834 CLNKQ7Z7G1 428 aa12.77□□□□□ -0.37
CD9-208ENST00000538834 RPS19BP1Q86WX3 136 aaKnown RBP12.77□□□□□ -0.37
CD9-208ENST00000538834 ST13P4Q8IZP2 240 aaPredicted RBP12.77□□□□□ -0.37
CD9-208ENST00000538834 BEST3Q8N1M1 668 aa12.77□□□□□ -0.37
CD9-208ENST00000538834 OR1N1Q8NGS0 311 aa12.77□□□□□ -0.37
CD9-208ENST00000538834 OR14A16Q8NHC5 309 aa12.77□□□□□ -0.37
CD9-208ENST00000538834 CPT1CQ8TCG5 803 aa12.77□□□□□ -0.37
CD9-208ENST00000538834 VMP1Q96GC9 406 aa12.77□□□□□ -0.37
CD9-208ENST00000538834 SCMH1Q96GD3 660 aa12.77□□□□□ -0.37
CD9-208ENST00000538834 METTL2AQ96IZ6 378 aaKnown RBP12.77□□□□□ -0.37
CD9-208ENST00000538834 FAM111AQ96PZ2 611 aa12.77□□□□□ -0.37
CD9-208ENST00000538834 HBEGFQ99075 208 aa12.77□□□□□ -0.37
CD9-208ENST00000538834 PLA2G3Q9NZ20 509 aa12.77□□□□□ -0.37
CD9-208ENST00000538834 TEKT2Q9UIF3 430 aa12.77□□□□□ -0.37
CD9-208ENST00000538834 MCM8Q9UJA3 840 aa12.77□□□□□ -0.37
CD9-208ENST00000538834 SLC12A4Q9UP95 1085 aa12.77□□□□□ -0.37
CD9-208ENST00000538834 PCDHA9Q9Y5H5 950 aa12.77□□□□□ -0.37
CD9-208ENST00000538834 SPACA6W5XKT8 324 aa12.77□□□□□ -0.37
CD9-208ENST00000538834 MYO7BQ6PIF6 2116 aa12.77□□□□□ -0.37
CD9-208ENST00000538834 LRRK2Q5S007 2527 aa12.77□□□□□ -0.37
CD9-208ENST00000538834 PTPN13Q12923 2485 aa12.76□□□□□ -0.37
CD9-208ENST00000538834 A0A1W2PS29 197 aa12.76□□□□□ -0.37
CD9-208ENST00000538834 A8MUA0 341 aa12.76□□□□□ -0.37
CD9-208ENST00000538834 SPAG7O75391 227 aa12.76□□□□□ -0.37
CD9-208ENST00000538834 NEURL1O76050 574 aa12.76□□□□□ -0.37
CD9-208ENST00000538834 GBAP04062 536 aa12.76□□□□□ -0.37
CD9-208ENST00000538834 CLPSP04118 112 aa12.76□□□□□ -0.37
CD9-208ENST00000538834 KLK1P06870 262 aa12.76□□□□□ -0.37
CD9-208ENST00000538834 NR2F6P10588 404 aa12.76□□□□□ -0.37
CD9-208ENST00000538834 UROSP10746 265 aa12.76□□□□□ -0.37
CD9-208ENST00000538834 HMOX2P30519 316 aa12.76□□□□□ -0.37
CD9-208ENST00000538834 TLX1P31314 330 aaPredicted RBP12.76□□□□□ -0.37
CD9-208ENST00000538834 CD96P40200 585 aa12.76□□□□□ -0.37
CD9-208ENST00000538834 BUD31P41223 144 aaPredicted RBP12.76□□□□□ -0.37
CD9-208ENST00000538834 CLCN2P51788 898 aa12.76□□□□□ -0.37
CD9-208ENST00000538834 TUBA3CQ13748 450 aa12.76□□□□□ -0.37
CD9-208ENST00000538834 MPP2Q14168 576 aa12.76□□□□□ -0.37
CD9-208ENST00000538834 CEBPEQ15744 281 aa12.76□□□□□ -0.37
CD9-208ENST00000538834 KRT71Q3SY84 523 aa12.76□□□□□ -0.37
CD9-208ENST00000538834 SGO1Q5FBB7 561 aa12.76□□□□□ -0.37
CD9-208ENST00000538834 NDUFAF5Q5TEU4 345 aa12.76□□□□□ -0.37
CD9-208ENST00000538834 ZNF468Q5VIY5 522 aaPredicted RBP12.76□□□□□ -0.37
CD9-208ENST00000538834 ABHD17BQ5VST6 288 aa12.76□□□□□ -0.37
CD9-208ENST00000538834 FCRLBQ6BAA4 426 aa12.76□□□□□ -0.37
CD9-208ENST00000538834 TUBA3EQ6PEY2 450 aa12.76□□□□□ -0.37
CD9-208ENST00000538834 CYP20A1Q6UW02 462 aa12.76□□□□□ -0.37
CD9-208ENST00000538834 OR4N5Q8IXE1 308 aa12.76□□□□□ -0.37
CD9-208ENST00000538834 SLC5A8Q8N695 610 aa12.76□□□□□ -0.37
CD9-208ENST00000538834 C1orf52Q8N6N3 182 aaKnown RBP12.76□□□□□ -0.37
CD9-208ENST00000538834 EFCAB3Q8N7B9 438 aa12.76□□□□□ -0.37
CD9-208ENST00000538834 CCNYL1Q8N7R7 359 aa12.76□□□□□ -0.37
CD9-208ENST00000538834 ZNF321PQ8N8H1 164 aa12.76□□□□□ -0.37
CD9-208ENST00000538834 GALNT11Q8NCW6 608 aa12.76□□□□□ -0.37
CD9-208ENST00000538834 DAZLQ92904 295 aaKnown RBP12.76□□□□□ -0.37
CD9-208ENST00000538834 NCLNQ969V3 563 aa12.76□□□□□ -0.37
CD9-208ENST00000538834 C19orf60Q96EN9 201 aa12.76□□□□□ -0.37
CD9-208ENST00000538834 APIPQ96GX9 242 aa12.76□□□□□ -0.37
CD9-208ENST00000538834 FCRL1Q96LA6 429 aa12.76□□□□□ -0.37
CD9-208ENST00000538834 ZNF681Q96N22 645 aa12.76□□□□□ -0.37
CD9-208ENST00000538834 SMC6Q96SB8 1091 aa12.76□□□□□ -0.37
CD9-208ENST00000538834 TRIM4Q9C037 500 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms