RNA–Protein interactions for RNA: ENST00000538828.1

CLTCL1-205, Transcript of clathrin heavy chain like 1, human

TSL 5

Gene CLTCL1, Length 448 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CLTCL1-205	ENST00000538828	ATG4B	Q9Y4P1	393 aa		11.47	□□□□□ -0.57
CLTCL1-205	ENST00000538828	DIDO1	Q9BTC0	2240 aa	Known RBP	11.46	□□□□□ -0.57
CLTCL1-205	ENST00000538828	COL12A1	Q99715	3063 aa		11.46	□□□□□ -0.57
CLTCL1-205	ENST00000538828	TRBV11-1	A0A0K0K1C0	115 aa		11.46	□□□□□ -0.57
CLTCL1-205	ENST00000538828	WIPF3	A6NGB9	483 aa		11.46	□□□□□ -0.57
CLTCL1-205	ENST00000538828	PLIN3	O60664	434 aa		11.46	□□□□□ -0.57
CLTCL1-205	ENST00000538828	ETHE1	O95571	254 aa		11.46	□□□□□ -0.57
CLTCL1-205	ENST00000538828	ESRRB	O95718	433 aa		11.46	□□□□□ -0.57
CLTCL1-205	ENST00000538828	GPR75	O95800	540 aa		11.46	□□□□□ -0.57
CLTCL1-205	ENST00000538828	PROC	P04070	461 aa		11.46	□□□□□ -0.57
CLTCL1-205	ENST00000538828	SHBG	P04278	402 aa		11.46	□□□□□ -0.57
CLTCL1-205	ENST00000538828	IFNA16	P05015	189 aa		11.46	□□□□□ -0.57
CLTCL1-205	ENST00000538828	SP1	P08047	785 aa		11.46	□□□□□ -0.57
CLTCL1-205	ENST00000538828	NR2F6	P10588	404 aa		11.46	□□□□□ -0.57
CLTCL1-205	ENST00000538828	KRT15	P19012	456 aa		11.46	□□□□□ -0.57
CLTCL1-205	ENST00000538828	TPP2	P29144	1249 aa	Predicted RBP	11.46	□□□□□ -0.57
CLTCL1-205	ENST00000538828	TDGF1P3	P51864	188 aa		11.46	□□□□□ -0.57
CLTCL1-205	ENST00000538828	NEK2	P51955	445 aa		11.46	□□□□□ -0.57
CLTCL1-205	ENST00000538828	CDH13	P55290	713 aa		11.46	□□□□□ -0.57
CLTCL1-205	ENST00000538828	VSNL1	P62760	191 aa		11.46	□□□□□ -0.57
CLTCL1-205	ENST00000538828	SRSF1	Q07955	248 aa	Known RBP eCLIP	11.46	□□□□□ -0.57
CLTCL1-205	ENST00000538828	NR6A1	Q15406	480 aa		11.46	□□□□□ -0.57
CLTCL1-205	ENST00000538828	MPEG1	Q2M385	716 aa		11.46	□□□□□ -0.57
CLTCL1-205	ENST00000538828	KRTCAP3	Q53RY4	240 aa		11.46	□□□□□ -0.57
CLTCL1-205	ENST00000538828	OR52E8	Q6IFG1	317 aa		11.46	□□□□□ -0.57
CLTCL1-205	ENST00000538828	SLC25A25	Q6KCM7	469 aa		11.46	□□□□□ -0.57
CLTCL1-205	ENST00000538828	ZYG11A	Q6WRX3	759 aa		11.46	□□□□□ -0.57
CLTCL1-205	ENST00000538828	HSDL2	Q6YN16	418 aa		11.46	□□□□□ -0.57
CLTCL1-205	ENST00000538828	GPRIN3	Q6ZVF9	776 aa		11.46	□□□□□ -0.57
CLTCL1-205	ENST00000538828	DND1	Q8IYX4	353 aa	Known RBP	11.46	□□□□□ -0.57
CLTCL1-205	ENST00000538828	KIF2B	Q8N4N8	673 aa		11.46	□□□□□ -0.57
CLTCL1-205	ENST00000538828	AEN	Q8WTP8	325 aa	Known RBP	11.46	□□□□□ -0.57
CLTCL1-205	ENST00000538828	NCLN	Q969V3	563 aa		11.46	□□□□□ -0.57
CLTCL1-205	ENST00000538828	TMEM125	Q96AQ2	219 aa		11.46	□□□□□ -0.57
CLTCL1-205	ENST00000538828	FBXL20	Q96IG2	436 aa		11.46	□□□□□ -0.57
CLTCL1-205	ENST00000538828	C5orf34	Q96MH7	638 aa		11.46	□□□□□ -0.57
CLTCL1-205	ENST00000538828	DGAT2	Q96PD7	388 aa		11.46	□□□□□ -0.57
CLTCL1-205	ENST00000538828	TAAR6	Q96RI8	345 aa		11.46	□□□□□ -0.57
CLTCL1-205	ENST00000538828	TMEM109	Q9BVC6	243 aa		11.46	□□□□□ -0.57
CLTCL1-205	ENST00000538828	PRM3	Q9NNZ6	103 aa		11.46	□□□□□ -0.57
CLTCL1-205	ENST00000538828	MYOT	Q9UBF9	498 aa		11.46	□□□□□ -0.57
CLTCL1-205	ENST00000538828	VPS29	Q9UBQ0	182 aa		11.46	□□□□□ -0.57
CLTCL1-205	ENST00000538828	COPS7A	Q9UBW8	275 aa		11.46	□□□□□ -0.57
CLTCL1-205	ENST00000538828	LGALS13	Q9UHV8	139 aa		11.46	□□□□□ -0.57
CLTCL1-205	ENST00000538828	ZNF223	Q9UK11	482 aa	Predicted RBP	11.46	□□□□□ -0.57
CLTCL1-205	ENST00000538828	EMCN	Q9ULC0	261 aa		11.46	□□□□□ -0.57
CLTCL1-205	ENST00000538828		A0A1W2PPM1	405 aa		11.45	□□□□□ -0.58
CLTCL1-205	ENST00000538828		A0A1W2PR48	441 aa		11.45	□□□□□ -0.58
CLTCL1-205	ENST00000538828	ARHGAP10	A1A4S6	786 aa		11.45	□□□□□ -0.58
CLTCL1-205	ENST00000538828	OR6C76	A6NM76	312 aa		11.45	□□□□□ -0.58
CLTCL1-205	ENST00000538828		A8MUA0	341 aa		11.45	□□□□□ -0.58
CLTCL1-205	ENST00000538828	ESPN	B1AK53	854 aa		11.45	□□□□□ -0.58
CLTCL1-205	ENST00000538828		G3V2L1	256 aa		11.45	□□□□□ -0.58
CLTCL1-205	ENST00000538828	GOLGA8R	I6L899	631 aa		11.45	□□□□□ -0.58
CLTCL1-205	ENST00000538828	SAP18	O00422	153 aa	Known RBP	11.45	□□□□□ -0.58
CLTCL1-205	ENST00000538828	TMPRSS11D	O60235	418 aa		11.45	□□□□□ -0.58
CLTCL1-205	ENST00000538828	FGF17	O60258	216 aa		11.45	□□□□□ -0.58
CLTCL1-205	ENST00000538828	NME2P1	O60361	137 aa		11.45	□□□□□ -0.58
CLTCL1-205	ENST00000538828	LDB3	O75112	727 aa		11.45	□□□□□ -0.58
CLTCL1-205	ENST00000538828	ULK1	O75385	1050 aa		11.45	□□□□□ -0.58
CLTCL1-205	ENST00000538828	EED	O75530	441 aa	Known RBP	11.45	□□□□□ -0.58
CLTCL1-205	ENST00000538828	IGKV3-11	P04433	115 aa		11.45	□□□□□ -0.58
CLTCL1-205	ENST00000538828	STS	P08842	583 aa		11.45	□□□□□ -0.58
CLTCL1-205	ENST00000538828	SLC35E2	P0CK97	266 aa		11.45	□□□□□ -0.58
CLTCL1-205	ENST00000538828	MYL2	P10916	166 aa		11.45	□□□□□ -0.58
CLTCL1-205	ENST00000538828	ALOX15	P16050	662 aa	Predicted RBP	11.45	□□□□□ -0.58
CLTCL1-205	ENST00000538828	NME2	P22392	152 aa		11.45	□□□□□ -0.58
CLTCL1-205	ENST00000538828	UQCRFS1	P47985	274 aa		11.45	□□□□□ -0.58
CLTCL1-205	ENST00000538828	FOLH1	Q04609	750 aa		11.45	□□□□□ -0.58
CLTCL1-205	ENST00000538828	TBL3	Q12788	808 aa	Known RBP	11.45	□□□□□ -0.58
CLTCL1-205	ENST00000538828	FCRLB	Q6BAA4	426 aa		11.45	□□□□□ -0.58
CLTCL1-205	ENST00000538828	GALNT18	Q6P9A2	607 aa		11.45	□□□□□ -0.58
CLTCL1-205	ENST00000538828	BNC2	Q6ZN30	1099 aa	Predicted RBP	11.45	□□□□□ -0.58
CLTCL1-205	ENST00000538828	RNF165	Q6ZSG1	346 aa		11.45	□□□□□ -0.58
CLTCL1-205	ENST00000538828	RNF175	Q8N4F7	328 aa		11.45	□□□□□ -0.58
CLTCL1-205	ENST00000538828	SLC15A4	Q8N697	577 aa		11.45	□□□□□ -0.58
CLTCL1-205	ENST00000538828	SLC2A12	Q8TD20	617 aa		11.45	□□□□□ -0.58
CLTCL1-205	ENST00000538828	ZNF721	Q8TF20	911 aa		11.45	□□□□□ -0.58
CLTCL1-205	ENST00000538828	THAP3	Q8WTV1	239 aa	Predicted RBP	11.45	□□□□□ -0.58
CLTCL1-205	ENST00000538828	SENP5	Q96HI0	755 aa	Predicted RBP	11.45	□□□□□ -0.58
CLTCL1-205	ENST00000538828	SGCZ	Q96LD1	299 aa		11.45	□□□□□ -0.58
CLTCL1-205	ENST00000538828	SIGLEC12	Q96PQ1	595 aa		11.45	□□□□□ -0.58
CLTCL1-205	ENST00000538828	TRMO	Q9BU70	441 aa		11.45	□□□□□ -0.58
CLTCL1-205	ENST00000538828	OXSM	Q9NWU1	459 aa		11.45	□□□□□ -0.58
CLTCL1-205	ENST00000538828	MAP10	Q9P2G4	905 aa		11.45	□□□□□ -0.58
CLTCL1-205	ENST00000538828	PSME2	Q9UL46	239 aa		11.45	□□□□□ -0.58
CLTCL1-205	ENST00000538828	WBP11	Q9Y2W2	641 aa	Known RBP	11.45	□□□□□ -0.58
CLTCL1-205	ENST00000538828	KLF13	Q9Y2Y9	288 aa	Predicted RBP	11.45	□□□□□ -0.58
CLTCL1-205	ENST00000538828	ICE1	Q9Y2F5	2266 aa		11.45	□□□□□ -0.58
CLTCL1-205	ENST00000538828		A0A1B0GTL3	188 aa		11.44	□□□□□ -0.58
CLTCL1-205	ENST00000538828	C1orf226	A1L170	272 aa		11.44	□□□□□ -0.58
CLTCL1-205	ENST00000538828	TMEM200C	A6NKL6	621 aa		11.44	□□□□□ -0.58
CLTCL1-205	ENST00000538828	C17orf105	B2RV13	164 aa		11.44	□□□□□ -0.58
CLTCL1-205	ENST00000538828	NPIPB8	E9PQR5	432 aa		11.44	□□□□□ -0.58
CLTCL1-205	ENST00000538828	MANBA	O00462	879 aa		11.44	□□□□□ -0.58
CLTCL1-205	ENST00000538828	PPP6C	O00743	305 aa		11.44	□□□□□ -0.58
CLTCL1-205	ENST00000538828	COPE	O14579	308 aa		11.44	□□□□□ -0.58
CLTCL1-205	ENST00000538828	ITGA10	O75578	1167 aa		11.44	□□□□□ -0.58
CLTCL1-205	ENST00000538828	SLC25A12	O75746	678 aa		11.44	□□□□□ -0.58
CLTCL1-205	ENST00000538828	OR4F21	O95013	312 aa		11.44	□□□□□ -0.58

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