RNA–Protein interactions for RNA: ENST00000535906.1

VPS33B-202, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 2 BASIC

Gene VPS33B, Length 2,420 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-202ENST00000535906 KLHL31Q9H511 634 aa12.7□□□□□ -0.38
VPS33B-202ENST00000535906 ACOT13Q9NPJ3 140 aa12.7□□□□□ -0.38
VPS33B-202ENST00000535906 SIRT3Q9NTG7 399 aaPredicted RBP12.7□□□□□ -0.38
VPS33B-202ENST00000535906 RLIMQ9NVW2 624 aa12.7□□□□□ -0.38
VPS33B-202ENST00000535906 ZBTB32Q9Y2Y4 487 aaPredicted RBP12.7□□□□□ -0.38
VPS33B-202ENST00000535906 SH3GLB1Q9Y371 365 aa12.7□□□□□ -0.38
VPS33B-202ENST00000535906 CLDN25C9JDP6 229 aa12.7□□□□□ -0.38
VPS33B-202ENST00000535906 PCDHGA12O60330 932 aa12.7□□□□□ -0.38
VPS33B-202ENST00000535906 WBP4O75554 376 aaKnown RBP12.7□□□□□ -0.38
VPS33B-202ENST00000535906 CLEC3AO75596 197 aa12.7□□□□□ -0.38
VPS33B-202ENST00000535906 FADS2O95864 444 aaKnown RBP12.7□□□□□ -0.38
VPS33B-202ENST00000535906 EGFP01133 1207 aa12.7□□□□□ -0.38
VPS33B-202ENST00000535906 OCM2P0CE71 109 aa12.7□□□□□ -0.38
VPS33B-202ENST00000535906 OCMP0CE72 109 aaPredicted RBP12.7□□□□□ -0.38
VPS33B-202ENST00000535906 HOXB2P14652 356 aa12.7□□□□□ -0.38
VPS33B-202ENST00000535906 BCL6P41182 706 aa12.7□□□□□ -0.38
VPS33B-202ENST00000535906 ST13P50502 369 aaKnown RBP12.7□□□□□ -0.38
VPS33B-202ENST00000535906 CDH12P55289 794 aa12.7□□□□□ -0.38
VPS33B-202ENST00000535906 ZNF846Q147U1 533 aa12.7□□□□□ -0.38
VPS33B-202ENST00000535906 TCEA2Q15560 299 aa12.7□□□□□ -0.38
VPS33B-202ENST00000535906 RPE65Q16518 533 aa12.7□□□□□ -0.38
VPS33B-202ENST00000535906 DUSP7Q16829 419 aa12.7□□□□□ -0.38
VPS33B-202ENST00000535906 ADPRMQ3LIE5 342 aa12.7□□□□□ -0.38
VPS33B-202ENST00000535906 SDE2Q6IQ49 451 aa12.7□□□□□ -0.38
VPS33B-202ENST00000535906 CCDC81Q6ZN84 652 aa12.7□□□□□ -0.38
VPS33B-202ENST00000535906 Q6ZPB1 254 aaPredicted RBP12.7□□□□□ -0.38
VPS33B-202ENST00000535906 SLCO6A1Q86UG4 719 aa12.7□□□□□ -0.38
VPS33B-202ENST00000535906 IGFN1Q86VF2 1251 aa12.7□□□□□ -0.38
VPS33B-202ENST00000535906 P2RY8Q86VZ1 359 aa12.7□□□□□ -0.38
VPS33B-202ENST00000535906 FBXL6Q8N531 539 aa12.7□□□□□ -0.38
VPS33B-202ENST00000535906 OR4C15Q8NGM1 316 aa12.7□□□□□ -0.38
VPS33B-202ENST00000535906 SLC6A20Q9NP91 592 aa12.7□□□□□ -0.38
VPS33B-202ENST00000535906 MRPS30Q9NP92 439 aaKnown RBP12.7□□□□□ -0.38
VPS33B-202ENST00000535906 CD93Q9NPY3 652 aa12.7□□□□□ -0.38
VPS33B-202ENST00000535906 RASSF1Q9NS23 344 aa12.7□□□□□ -0.38
VPS33B-202ENST00000535906 THSD1Q9NS62 852 aa12.7□□□□□ -0.38
VPS33B-202ENST00000535906 PNMA8BQ9ULN7 279 aaPredicted RBP12.7□□□□□ -0.38
VPS33B-202ENST00000535906 ANGPT4Q9Y264 503 aa12.7□□□□□ -0.38
VPS33B-202ENST00000535906 A0A0A6YYD5 115 aa12.69□□□□□ -0.38
VPS33B-202ENST00000535906 C4orf51C9J302 202 aa12.69□□□□□ -0.38
VPS33B-202ENST00000535906 CACNB4O00305 520 aaPredicted RBP12.69□□□□□ -0.38
VPS33B-202ENST00000535906 PRICKLE3O43900 615 aaPredicted RBP12.69□□□□□ -0.38
VPS33B-202ENST00000535906 KLF8O95600 359 aaPredicted RBP12.69□□□□□ -0.38
VPS33B-202ENST00000535906 RECKO95980 971 aa12.69□□□□□ -0.38
VPS33B-202ENST00000535906 PSMB9P28065 219 aa12.69□□□□□ -0.38
VPS33B-202ENST00000535906 CLDN2P57739 230 aa12.69□□□□□ -0.38
VPS33B-202ENST00000535906 CSNK2BP67870 215 aa12.69□□□□□ -0.38
VPS33B-202ENST00000535906 SPIBQ01892 262 aa12.69□□□□□ -0.38
VPS33B-202ENST00000535906 RGS21Q2M5E4 152 aa12.69□□□□□ -0.38
VPS33B-202ENST00000535906 RPS26P11Q5JNZ5 115 aaPredicted RBP12.69□□□□□ -0.38
VPS33B-202ENST00000535906 REEP3Q6NUK4 255 aa12.69□□□□□ -0.38
VPS33B-202ENST00000535906 ENTHD1Q8IYW4 607 aa12.69□□□□□ -0.38
VPS33B-202ENST00000535906 SLC5A8Q8N695 610 aa12.69□□□□□ -0.38
VPS33B-202ENST00000535906 SLC38A5Q8WUX1 472 aa12.69□□□□□ -0.38
VPS33B-202ENST00000535906 APH1BQ8WW43 257 aa12.69□□□□□ -0.38
VPS33B-202ENST00000535906 JPH3Q8WXH2 748 aaPredicted RBP12.69□□□□□ -0.38
VPS33B-202ENST00000535906 KCNC2Q96PR1 638 aa12.69□□□□□ -0.38
VPS33B-202ENST00000535906 SIGLEC11Q96RL6 698 aa12.69□□□□□ -0.38
VPS33B-202ENST00000535906 DPH7Q9BTV6 452 aa12.69□□□□□ -0.38
VPS33B-202ENST00000535906 C1QTNF7Q9BXJ2 289 aa12.69□□□□□ -0.38
VPS33B-202ENST00000535906 RSPO3Q9BXY4 272 aaPredicted RBP12.69□□□□□ -0.38
VPS33B-202ENST00000535906 HMG20AQ9NP66 347 aa12.69□□□□□ -0.38
VPS33B-202ENST00000535906 SPHK1Q9NYA1 384 aa12.69□□□□□ -0.38
VPS33B-202ENST00000535906 ADAM29Q9UKF5 820 aa12.69□□□□□ -0.38
VPS33B-202ENST00000535906 PCDHGA6Q9Y5G7 932 aa12.69□□□□□ -0.38
VPS33B-202ENST00000535906 NINQ8N4C6 2090 aa12.69□□□□□ -0.38
VPS33B-202ENST00000535906 TRBC2A0A5B9 178 aa12.69□□□□□ -0.38
VPS33B-202ENST00000535906 M0R3G1 203 aa12.69□□□□□ -0.38
VPS33B-202ENST00000535906 HAT1O14929 419 aa12.69□□□□□ -0.38
VPS33B-202ENST00000535906 PRKRAO75569 313 aaKnown RBP12.69□□□□□ -0.38
VPS33B-202ENST00000535906 IFNA14P01570 189 aa12.69□□□□□ -0.38
VPS33B-202ENST00000535906 BCHEP06276 602 aa12.69□□□□□ -0.38
VPS33B-202ENST00000535906 PEBP1P30086 187 aaKnown RBP12.69□□□□□ -0.38
VPS33B-202ENST00000535906 CTHP32929 405 aa12.69□□□□□ -0.38
VPS33B-202ENST00000535906 IDUAP35475 653 aa12.69□□□□□ -0.38
VPS33B-202ENST00000535906 SSR2P43308 183 aa12.69□□□□□ -0.38
VPS33B-202ENST00000535906 HYAL2Q12891 473 aa12.69□□□□□ -0.38
VPS33B-202ENST00000535906 ITGADQ13349 1161 aa12.69□□□□□ -0.38
VPS33B-202ENST00000535906 EXOC3L2Q2M3D2 409 aa12.69□□□□□ -0.38
VPS33B-202ENST00000535906 GPR153Q6NV75 609 aa12.69□□□□□ -0.38
VPS33B-202ENST00000535906 C6orf120Q7Z4R8 191 aa12.69□□□□□ -0.38
VPS33B-202ENST00000535906 SLC44A2Q8IWA5 706 aaPredicted RBP12.69□□□□□ -0.38
VPS33B-202ENST00000535906 TMCO5AQ8N6Q1 288 aa12.69□□□□□ -0.38
VPS33B-202ENST00000535906 GEMIN6Q8WXD5 167 aaKnown RBP12.69□□□□□ -0.38
VPS33B-202ENST00000535906 RAB8BQ92930 207 aa12.69□□□□□ -0.38
VPS33B-202ENST00000535906 SCARF2Q96GP6 870 aaPredicted RBP12.69□□□□□ -0.38
VPS33B-202ENST00000535906 RAB11FIP5Q9BXF6 653 aa12.69□□□□□ -0.38
VPS33B-202ENST00000535906 MVB12BQ9H7P6 319 aa12.69□□□□□ -0.38
VPS33B-202ENST00000535906 SYNPO2LQ9H987 977 aa12.69□□□□□ -0.38
VPS33B-202ENST00000535906 NEUROD4Q9HD90 331 aa12.69□□□□□ -0.38
VPS33B-202ENST00000535906 CA5BQ9Y2D0 317 aa12.69□□□□□ -0.38
VPS33B-202ENST00000535906 MDC1Q14676 2089 aaKnown RBP12.68□□□□□ -0.38
VPS33B-202ENST00000535906 PRSS38A1L453 326 aa12.68□□□□□ -0.38
VPS33B-202ENST00000535906 H0Y8X5 98 aa12.68□□□□□ -0.38
VPS33B-202ENST00000535906 EML2O95834 649 aa12.68□□□□□ -0.38
VPS33B-202ENST00000535906 XCR1P46094 333 aa12.68□□□□□ -0.38
VPS33B-202ENST00000535906 PXNP49023 591 aaPredicted RBP12.68□□□□□ -0.38
VPS33B-202ENST00000535906 DGCR6Q14129 220 aa12.68□□□□□ -0.38
VPS33B-202ENST00000535906 NDUFAF5Q5TEU4 345 aa12.68□□□□□ -0.38
VPS33B-202ENST00000535906 ARMC8Q8IUR7 673 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms