RNA–Protein interactions for RNA: ENST00000534532.6

NCAPD3-213, Transcript of non-SMC condensin II complex subunit D3, human

TSL 2

Gene NCAPD3, Length 5,539 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NCAPD3-213	ENST00000534532	PLD6	Q8N2A8	252 aa	Known RBP	15.06	■□□□□ 0
NCAPD3-213	ENST00000534532	OR6N2	Q8NGY6	317 aa		15.06	■□□□□ 0
NCAPD3-213	ENST00000534532	EDA	Q92838	391 aa		15.06	■□□□□ 0
NCAPD3-213	ENST00000534532	TMEM74	Q96NL1	305 aa		15.06	■□□□□ 0
NCAPD3-213	ENST00000534532	GSC	P56915	257 aa	Predicted RBP	15.06	■□□□□ 0
NCAPD3-213	ENST00000534532	GALK2	Q01415	458 aa		15.06	■□□□□ 0
NCAPD3-213	ENST00000534532	USP43	Q70EL4	1123 aa		15.06	■□□□□ 0
NCAPD3-213	ENST00000534532	TMEM151B	Q8IW70	566 aa		15.06	■□□□□ 0
NCAPD3-213	ENST00000534532	OR52P1P	Q8NH57	321 aa		15.06	■□□□□ 0
NCAPD3-213	ENST00000534532	NSMAF	Q92636	917 aa		15.06	■□□□□ 0
NCAPD3-213	ENST00000534532	SLC12A9	Q9BXP2	914 aa		15.06	■□□□□ 0
NCAPD3-213	ENST00000534532	CXorf21	Q9HAI6	301 aa		15.06	■□□□□ 0
NCAPD3-213	ENST00000534532	NPIPB15	A6NHN6	443 aa	Predicted RBP	15.06	■□□□□ 0
NCAPD3-213	ENST00000534532	BCKDHA	P12694	445 aa		15.06	■□□□□ 0
NCAPD3-213	ENST00000534532	RPS3	P23396	243 aa	Known RBP eCLIP	15.06	■□□□□ 0
NCAPD3-213	ENST00000534532	ARSD	P51689	593 aa		15.06	■□□□□ 0
NCAPD3-213	ENST00000534532	UGT3A2	Q3SY77	523 aa		15.06	■□□□□ 0
NCAPD3-213	ENST00000534532	ANKRD54	Q6NXT1	300 aa		15.06	■□□□□ 0
NCAPD3-213	ENST00000534532	MARCH9	Q86YJ5	346 aa		15.06	■□□□□ 0
NCAPD3-213	ENST00000534532	RELL1	Q8IUW5	271 aa		15.06	■□□□□ 0
NCAPD3-213	ENST00000534532	SERINC2	Q96SA4	455 aa		15.06	■□□□□ 0
NCAPD3-213	ENST00000534532	COMMD3	Q9UBI1	195 aa		15.06	■□□□□ 0
NCAPD3-213	ENST00000534532	OAZ3	Q9UMX2	235 aa		15.06	■□□□□ 0
NCAPD3-213	ENST00000534532	S1PR1	P21453	382 aa		15.05	■□□□□ 0
NCAPD3-213	ENST00000534532	GLP1R	P43220	463 aa		15.05	■□□□□ 0
NCAPD3-213	ENST00000534532	ECH1	Q13011	328 aa		15.05	■□□□□ 0
NCAPD3-213	ENST00000534532	KHDC1	Q4VXA5	237 aa	Known RBP	15.05	■□□□□ 0
NCAPD3-213	ENST00000534532	ATG9B	Q674R7	924 aa		15.05	■□□□□ 0
NCAPD3-213	ENST00000534532	C6orf120	Q7Z4R8	191 aa		15.05	■□□□□ 0
NCAPD3-213	ENST00000534532	FTMT	Q8N4E7	242 aa		15.05	■□□□□ 0
NCAPD3-213	ENST00000534532	MND1	Q9BWT6	205 aa		15.05	■□□□□ 0
NCAPD3-213	ENST00000534532	ACAD8	Q9UKU7	415 aa		15.05	■□□□□ 0
NCAPD3-213	ENST00000534532	PTRH2	Q9Y3E5	179 aa	Known RBP	15.05	■□□□□ 0
NCAPD3-213	ENST00000534532	FTCDNL1	E5RQL4	147 aa		15.05	■□□□□ -0
NCAPD3-213	ENST00000534532	SPARC	P09486	303 aa		15.05	■□□□□ -0
NCAPD3-213	ENST00000534532	PABPC4L	P0CB38	370 aa	Known RBP	15.05	■□□□□ -0
NCAPD3-213	ENST00000534532	DGLUCY	Q7Z3D6	616 aa		15.05	■□□□□ -0
NCAPD3-213	ENST00000534532	OR4N5	Q8IXE1	308 aa		15.05	■□□□□ -0
NCAPD3-213	ENST00000534532	ZNF565	Q8N9K5	539 aa		15.05	■□□□□ -0
NCAPD3-213	ENST00000534532	FBXL8	Q96CD0	374 aa		15.05	■□□□□ -0
NCAPD3-213	ENST00000534532	RADIL	Q96JH8	1075 aa		15.05	■□□□□ -0
NCAPD3-213	ENST00000534532	GIMAP2	Q9UG22	337 aa		15.05	■□□□□ -0
NCAPD3-213	ENST00000534532	SLC7A11	Q9UPY5	501 aa		15.05	■□□□□ -0
NCAPD3-213	ENST00000534532	FABP12	A6NFH5	140 aa		15.05	■□□□□ -0
NCAPD3-213	ENST00000534532	RTCA	O00442	366 aa	Known RBP	15.05	■□□□□ -0
NCAPD3-213	ENST00000534532	ENTPD6	O75354	484 aa		15.05	■□□□□ -0
NCAPD3-213	ENST00000534532	IGHE	P01854	428 aa		15.05	■□□□□ -0
NCAPD3-213	ENST00000534532	FAM26D	Q5JW98	314 aa		15.05	■□□□□ -0
NCAPD3-213	ENST00000534532	SWT1	Q5T5J6	900 aa	Known RBP	15.05	■□□□□ -0
NCAPD3-213	ENST00000534532	NAXE	Q8NCW5	288 aa		15.05	■□□□□ -0
NCAPD3-213	ENST00000534532	C3orf58	Q8NDZ4	430 aa		15.05	■□□□□ -0
NCAPD3-213	ENST00000534532	BIRC7	Q96CA5	298 aa		15.05	■□□□□ -0
NCAPD3-213	ENST00000534532	MEAF6	Q9HAF1	191 aa		15.05	■□□□□ -0
NCAPD3-213	ENST00000534532	MSANTD3-TMEFF1	A0A0A6YYJ0	341 aa		15.05	■□□□□ -0
NCAPD3-213	ENST00000534532	DRGX	A6NNA5	263 aa		15.05	■□□□□ -0
NCAPD3-213	ENST00000534532	HLA-DPB1	P04440	258 aa		15.05	■□□□□ -0
NCAPD3-213	ENST00000534532	H2BFM	P0C1H6	154 aa		15.05	■□□□□ -0
NCAPD3-213	ENST00000534532	AZGP1	P25311	298 aa	Known RBP	15.05	■□□□□ -0
NCAPD3-213	ENST00000534532	SLC6A11	P48066	632 aa		15.05	■□□□□ -0
NCAPD3-213	ENST00000534532	SLC3A1	Q07837	685 aa		15.05	■□□□□ -0
NCAPD3-213	ENST00000534532	MALL	Q13021	153 aa		15.05	■□□□□ -0
NCAPD3-213	ENST00000534532	TUBB3	Q13509	450 aa		15.05	■□□□□ -0
NCAPD3-213	ENST00000534532	MLF2	Q15773	248 aa	Predicted RBP	15.05	■□□□□ -0
NCAPD3-213	ENST00000534532	RABL3	Q5HYI8	236 aa		15.05	■□□□□ -0
NCAPD3-213	ENST00000534532	SLC35F1	Q5T1Q4	408 aa		15.05	■□□□□ -0
NCAPD3-213	ENST00000534532	PLEKHG7	Q6ZR37	379 aa		15.05	■□□□□ -0
NCAPD3-213	ENST00000534532	TMEFF1	Q8IYR6	380 aa		15.05	■□□□□ -0
NCAPD3-213	ENST00000534532	FRMD6	Q96NE9	622 aa		15.05	■□□□□ -0
NCAPD3-213	ENST00000534532	SCGN	O76038	276 aa		15.04	■□□□□ -0
NCAPD3-213	ENST00000534532	XRCC1	P18887	633 aa	Predicted RBP	15.04	■□□□□ -0
NCAPD3-213	ENST00000534532	ENTPD1	P49961	510 aa		15.04	■□□□□ -0
NCAPD3-213	ENST00000534532	TAS2R38	P59533	333 aa		15.04	■□□□□ -0
NCAPD3-213	ENST00000534532	ERVFC1	P60507	584 aa		15.04	■□□□□ -0
NCAPD3-213	ENST00000534532	DSG2	Q14126	1118 aa		15.04	■□□□□ -0
NCAPD3-213	ENST00000534532	MAD2L1BP	Q15013	274 aa	Predicted RBP	15.04	■□□□□ -0
NCAPD3-213	ENST00000534532	PARS2	Q7L3T8	475 aa	Known RBP	15.04	■□□□□ -0
NCAPD3-213	ENST00000534532	ZNF548	Q8NEK5	533 aa	Predicted RBP	15.04	■□□□□ -0
NCAPD3-213	ENST00000534532	DTD2	Q96FN9	168 aa		15.04	■□□□□ -0
NCAPD3-213	ENST00000534532	RTP3	Q9BQQ7	232 aa		15.04	■□□□□ -0
NCAPD3-213	ENST00000534532	SLC39A1	Q9NY26	324 aa		15.04	■□□□□ -0
NCAPD3-213	ENST00000534532	IRF2	P14316	349 aa		15.04	■□□□□ -0
NCAPD3-213	ENST00000534532	CDK3	Q00526	305 aa		15.04	■□□□□ -0
NCAPD3-213	ENST00000534532	RBPJ	Q06330	500 aa		15.04	■□□□□ -0
NCAPD3-213	ENST00000534532	ULK3	Q6PHR2	472 aa		15.04	■□□□□ -0
NCAPD3-213	ENST00000534532	ASB18	Q6ZVZ8	466 aa		15.04	■□□□□ -0
NCAPD3-213	ENST00000534532	CYS1	Q717R9	158 aa		15.04	■□□□□ -0
NCAPD3-213	ENST00000534532	OR8J3	Q8NGG0	315 aa		15.04	■□□□□ -0
NCAPD3-213	ENST00000534532	NSUN5	Q96P11	429 aa	Known RBP	15.04	■□□□□ -0
NCAPD3-213	ENST00000534532	MED28	Q9H204	178 aa		15.04	■□□□□ -0
NCAPD3-213	ENST00000534532	SMAD6	O43541	496 aa	Known RBP	15.04	■□□□□ -0
NCAPD3-213	ENST00000534532	ABCB7	O75027	752 aa		15.04	■□□□□ -0
NCAPD3-213	ENST00000534532	GSTM2	P28161	218 aa		15.04	■□□□□ -0
NCAPD3-213	ENST00000534532	DIO3	P55073	304 aa		15.04	■□□□□ -0
NCAPD3-213	ENST00000534532	CDKN2D	P55273	166 aa		15.04	■□□□□ -0
NCAPD3-213	ENST00000534532	GXYLT1	Q4G148	440 aa		15.04	■□□□□ -0
NCAPD3-213	ENST00000534532	PNCK	Q6P2M8	343 aa		15.04	■□□□□ -0
NCAPD3-213	ENST00000534532	PDZD3	Q86UT5	571 aa		15.04	■□□□□ -0
NCAPD3-213	ENST00000534532	TRIM73	Q86UV7	250 aa		15.04	■□□□□ -0
NCAPD3-213	ENST00000534532	ZNF227	Q86WZ6	799 aa		15.04	■□□□□ -0
NCAPD3-213	ENST00000534532	ZSWIM9	Q86XI8	627 aa		15.04	■□□□□ -0

Retrieved 100 of 20,778 RNA–protein pairs in 34 ms