RNA–Protein interactions for RNA: ENST00000533801.6

ATP2C1-224, Transcript of ATPase secretory pathway Ca2+ transporting 1, humanhuman

TSL 1 (best) BASIC

Gene ATP2C1, Length 3,690 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2C1-224ENST00000533801 CD36P16671 472 aa15.13■□□□□ 0.01
ATP2C1-224ENST00000533801 BCL6P41182 706 aa15.13■□□□□ 0.01
ATP2C1-224ENST00000533801 MAGEA2P43356 314 aa15.13■□□□□ 0.01
ATP2C1-224ENST00000533801 MAGEA10P43363 369 aaPredicted RBP15.13■□□□□ 0.01
ATP2C1-224ENST00000533801 CSNK1G2P78368 415 aa15.13■□□□□ 0.01
ATP2C1-224ENST00000533801 LSM11P83369 360 aaKnown RBP eCLIP15.13■□□□□ 0.01
ATP2C1-224ENST00000533801 REEP3Q6NUK4 255 aa15.13■□□□□ 0.01
ATP2C1-224ENST00000533801 ARMC8Q8IUR7 673 aa15.13■□□□□ 0.01
ATP2C1-224ENST00000533801 TRIM48Q8IWZ4 208 aa15.13■□□□□ 0.01
ATP2C1-224ENST00000533801 KLHDC8AQ8IYD2 350 aa15.13■□□□□ 0.01
ATP2C1-224ENST00000533801 RDH12Q96NR8 316 aa15.13■□□□□ 0.01
ATP2C1-224ENST00000533801 C6orf62Q9GZU0 229 aaPredicted RBP15.13■□□□□ 0.01
ATP2C1-224ENST00000533801 OR51I1Q9H343 314 aa15.13■□□□□ 0.01
ATP2C1-224ENST00000533801 DNAJC27Q9NZQ0 273 aa15.13■□□□□ 0.01
ATP2C1-224ENST00000533801 NDRG2Q9UN36 371 aaKnown RBP15.13■□□□□ 0.01
ATP2C1-224ENST00000533801 PCDHGA10Q9Y5H3 936 aa15.13■□□□□ 0.01
ATP2C1-224ENST00000533801 TNFRSF21O75509 655 aa15.12■□□□□ 0.01
ATP2C1-224ENST00000533801 NTN1O95631 604 aa15.12■□□□□ 0.01
ATP2C1-224ENST00000533801 IFNA14P01570 189 aa15.12■□□□□ 0.01
ATP2C1-224ENST00000533801 RAB28P51157 221 aa15.12■□□□□ 0.01
ATP2C1-224ENST00000533801 BMXP51813 675 aa15.12■□□□□ 0.01
ATP2C1-224ENST00000533801 MLLT10P55197 1068 aa15.12■□□□□ 0.01
ATP2C1-224ENST00000533801 MLLT1Q03111 559 aaPredicted RBP15.12■□□□□ 0.01
ATP2C1-224ENST00000533801 PTCHD4Q6ZW05 846 aa15.12■□□□□ 0.01
ATP2C1-224ENST00000533801 P2RY8Q86VZ1 359 aa15.12■□□□□ 0.01
ATP2C1-224ENST00000533801 RAB2BQ8WUD1 216 aa15.12■□□□□ 0.01
ATP2C1-224ENST00000533801 CXorf40BQ96DE9 158 aa15.12■□□□□ 0.01
ATP2C1-224ENST00000533801 DOCK8Q8NF50 2099 aa15.12■□□□□ 0.01
ATP2C1-224ENST00000533801 KLHL18O94889 574 aa15.12■□□□□ 0.01
ATP2C1-224ENST00000533801 CCNB2O95067 398 aa15.12■□□□□ 0.01
ATP2C1-224ENST00000533801 ACSL1P33121 698 aa15.12■□□□□ 0.01
ATP2C1-224ENST00000533801 PIK3CBP42338 1070 aa15.12■□□□□ 0.01
ATP2C1-224ENST00000533801 TMEM196Q5HYL7 178 aa15.12■□□□□ 0.01
ATP2C1-224ENST00000533801 BTLAQ7Z6A9 289 aa15.12■□□□□ 0.01
ATP2C1-224ENST00000533801 SETD7Q8WTS6 366 aaKnown RBP15.12■□□□□ 0.01
ATP2C1-224ENST00000533801 FAR1Q8WVX9 515 aa15.12■□□□□ 0.01
ATP2C1-224ENST00000533801 RAB7BQ96AH8 199 aa15.12■□□□□ 0.01
ATP2C1-224ENST00000533801 HDAC8Q9BY41 377 aa15.12■□□□□ 0.01
ATP2C1-224ENST00000533801 YTHDF1Q9BYJ9 559 aaKnown RBP15.12■□□□□ 0.01
ATP2C1-224ENST00000533801 RNF167Q9H6Y7 350 aa15.12■□□□□ 0.01
ATP2C1-224ENST00000533801 SPATA7Q9P0W8 599 aa15.12■□□□□ 0.01
ATP2C1-224ENST00000533801 SLC13A4Q9UKG4 626 aa15.12■□□□□ 0.01
ATP2C1-224ENST00000533801 ATG4BQ9Y4P1 393 aa15.12■□□□□ 0.01
ATP2C1-224ENST00000533801 TBX6O95947 436 aaPredicted RBP15.12■□□□□ 0.01
ATP2C1-224ENST00000533801 EGFP01133 1207 aa15.12■□□□□ 0.01
ATP2C1-224ENST00000533801 PVRP15151 417 aa15.12■□□□□ 0.01
ATP2C1-224ENST00000533801 POLR2CP19387 275 aaPredicted RBP15.12■□□□□ 0.01
ATP2C1-224ENST00000533801 UQCRC2P22695 453 aa15.12■□□□□ 0.01
ATP2C1-224ENST00000533801 IGFALSP35858 605 aa15.12■□□□□ 0.01
ATP2C1-224ENST00000533801 RPL3P39023 403 aaKnown RBP15.12■□□□□ 0.01
ATP2C1-224ENST00000533801 TARDBPQ13148 414 aaKnown RBP eCLIP15.12■□□□□ 0.015e-6■■■■□ 20.6
ATP2C1-224ENST00000533801 TOP3AQ13472 1001 aaPredicted RBP15.12■□□□□ 0.01
ATP2C1-224ENST00000533801 ADAMTSL4Q6UY14 1074 aa15.12■□□□□ 0.01
ATP2C1-224ENST00000533801 UTS2BQ765I0 119 aa15.12■□□□□ 0.01
ATP2C1-224ENST00000533801 ZNF765Q7L2R6 523 aa15.12■□□□□ 0.01
ATP2C1-224ENST00000533801 ZNF614Q8N883 585 aa15.12■□□□□ 0.01
ATP2C1-224ENST00000533801 PSD4Q8NDX1 1056 aa15.12■□□□□ 0.01
ATP2C1-224ENST00000533801 GEMIN6Q8WXD5 167 aaKnown RBP15.12■□□□□ 0.01
ATP2C1-224ENST00000533801 SLC9A6Q92581 669 aa15.12■□□□□ 0.01
ATP2C1-224ENST00000533801 ZBED6CLQ96FA7 236 aaPredicted RBP15.12■□□□□ 0.01
ATP2C1-224ENST00000533801 SLC35G5Q96KT7 338 aa15.12■□□□□ 0.01
ATP2C1-224ENST00000533801 MCOLN1Q9GZU1 580 aa15.12■□□□□ 0.01
ATP2C1-224ENST00000533801 IL20RAQ9UHF4 553 aa15.12■□□□□ 0.01
ATP2C1-224ENST00000533801 CORINQ9Y5Q5 1042 aa15.12■□□□□ 0.01
ATP2C1-224ENST00000533801 GASTP01350 101 aa15.11■□□□□ 0.01
ATP2C1-224ENST00000533801 COL9A1P20849 921 aa15.11■□□□□ 0.01
ATP2C1-224ENST00000533801 C5AR1P21730 350 aa15.11■□□□□ 0.01
ATP2C1-224ENST00000533801 IGFBP4P22692 258 aa15.11■□□□□ 0.01
ATP2C1-224ENST00000533801 NTSP30990 170 aa15.11■□□□□ 0.01
ATP2C1-224ENST00000533801 BSGP35613 385 aa15.11■□□□□ 0.01
ATP2C1-224ENST00000533801 RPS21P63220 83 aaKnown RBP15.11■□□□□ 0.01
ATP2C1-224ENST00000533801 C1orf61Q13536 156 aa15.11■□□□□ 0.01
ATP2C1-224ENST00000533801 SLC9A5Q14940 896 aa15.11■□□□□ 0.01
ATP2C1-224ENST00000533801 LTB4RQ15722 352 aa15.11■□□□□ 0.01
ATP2C1-224ENST00000533801 OR4C11Q6IEV9 310 aa15.11■□□□□ 0.01
ATP2C1-224ENST00000533801 ZNF793Q6ZN11 406 aa15.11■□□□□ 0.01
ATP2C1-224ENST00000533801 MTSS1LQ765P7 747 aa15.11■□□□□ 0.01
ATP2C1-224ENST00000533801 SHISA5Q8N114 240 aa15.11■□□□□ 0.01
ATP2C1-224ENST00000533801 TBC1D15Q8TC07 691 aa15.11■□□□□ 0.01
ATP2C1-224ENST00000533801 SMAD5Q99717 465 aaKnown RBP15.11■□□□□ 0.01
ATP2C1-224ENST00000533801 CHCHD6Q9BRQ6 235 aa15.11■□□□□ 0.01
ATP2C1-224ENST00000533801 TMEM168Q9H0V1 697 aa15.11■□□□□ 0.01
ATP2C1-224ENST00000533801 PLGRKTQ9HBL7 147 aa15.11■□□□□ 0.01
ATP2C1-224ENST00000533801 MS4A12Q9NXJ0 267 aa15.11■□□□□ 0.01
ATP2C1-224ENST00000533801 ETAA1Q9NY74 926 aa15.11■□□□□ 0.01
ATP2C1-224ENST00000533801 TBC1D29Q9UFV1 150 aa15.11■□□□□ 0.01
ATP2C1-224ENST00000533801 PCDHGA6Q9Y5G7 932 aa15.11■□□□□ 0.01
ATP2C1-224ENST00000533801 ZW10O43264 779 aa15.11■□□□□ 0.01
ATP2C1-224ENST00000533801 ASGR2P07307 311 aa15.11■□□□□ 0.01
ATP2C1-224ENST00000533801 LAMP2P13473 410 aa15.11■□□□□ 0.01
ATP2C1-224ENST00000533801 DEFB134Q4QY38 66 aa15.11■□□□□ 0.01
ATP2C1-224ENST00000533801 TSEN54Q7Z6J9 526 aaKnown RBP15.11■□□□□ 0.01
ATP2C1-224ENST00000533801 HCAR2Q8TDS4 363 aa15.11■□□□□ 0.01
ATP2C1-224ENST00000533801 FCRL1Q96LA6 429 aa15.11■□□□□ 0.01
ATP2C1-224ENST00000533801 RBCK1Q9BYM8 510 aa15.11■□□□□ 0.01
ATP2C1-224ENST00000533801 MSRAQ9UJ68 235 aa15.11■□□□□ 0.01
ATP2C1-224ENST00000533801 CLCA2Q9UQC9 943 aa15.11■□□□□ 0.01
ATP2C1-224ENST00000533801 ENTPD4Q9Y227 616 aa15.11■□□□□ 0.01
ATP2C1-224ENST00000533801 HELZP42694 1942 aaKnown RBP15.11■□□□□ 0.01
ATP2C1-224ENST00000533801 C5orf67F2Z3F1 127 aa15.11■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms