RNA–Protein interactions for RNA: ENST00000533628.5

RPUSD4-208, Transcript of RNA pseudouridylate synthase domain containing 4, humanhuman

TSL 1 (best) BASIC

Gene RPUSD4, Length 2,053 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD4-208ENST00000533628 FAM47BQ8NA70 645 aa11.96□□□□□ -0.5
RPUSD4-208ENST00000533628 PUM2Q8TB72 1066 aaKnown RBP eCLIP11.96□□□□□ -0.5
RPUSD4-208ENST00000533628 NACC2Q96BF6 587 aa11.96□□□□□ -0.5
RPUSD4-208ENST00000533628 C19orf60Q96EN9 201 aa11.96□□□□□ -0.5
RPUSD4-208ENST00000533628 ELAC2Q9BQ52 826 aaKnown RBP11.96□□□□□ -0.5
RPUSD4-208ENST00000533628 TEX10Q9NXF1 929 aaPredicted RBP11.96□□□□□ -0.5
RPUSD4-208ENST00000533628 MS4A12Q9NXJ0 267 aa11.96□□□□□ -0.5
RPUSD4-208ENST00000533628 NKX1-2Q9UD57 310 aaPredicted RBP11.96□□□□□ -0.5
RPUSD4-208ENST00000533628 PHF11Q9UIL8 331 aa11.96□□□□□ -0.5
RPUSD4-208ENST00000533628 LRCH1Q9Y2L9 728 aa11.96□□□□□ -0.5
RPUSD4-208ENST00000533628 LOC102723996A0A087X1L8 192 aa11.95□□□□□ -0.5
RPUSD4-208ENST00000533628 ATP6AP2A0A1C7CYW4 349 aa11.95□□□□□ -0.5
RPUSD4-208ENST00000533628 PCDH7O60245 1069 aa11.95□□□□□ -0.5
RPUSD4-208ENST00000533628 ATP6AP2O75787 350 aa11.95□□□□□ -0.5
RPUSD4-208ENST00000533628 CDC123O75794 336 aaPredicted RBP11.95□□□□□ -0.5
RPUSD4-208ENST00000533628 IGHEP01854 428 aa11.95□□□□□ -0.5
RPUSD4-208ENST00000533628 CPN2P22792 545 aa11.95□□□□□ -0.5
RPUSD4-208ENST00000533628 JAK1P23458 1154 aa11.95□□□□□ -0.5
RPUSD4-208ENST00000533628 TMPRSS3P57727 454 aa11.95□□□□□ -0.5
RPUSD4-208ENST00000533628 MC1RQ01726 317 aa11.95□□□□□ -0.5
RPUSD4-208ENST00000533628 TNFRSF17Q02223 184 aa11.95□□□□□ -0.5
RPUSD4-208ENST00000533628 VAC14Q08AM6 782 aa11.95□□□□□ -0.5
RPUSD4-208ENST00000533628 CDC20Q12834 499 aa11.95□□□□□ -0.5
RPUSD4-208ENST00000533628 NR6A1Q15406 480 aa11.95□□□□□ -0.5
RPUSD4-208ENST00000533628 NOXRED1Q6NXP6 359 aa11.95□□□□□ -0.5
RPUSD4-208ENST00000533628 KIRREL2Q6UWL6 708 aa11.95□□□□□ -0.5
RPUSD4-208ENST00000533628 ZNF595Q8IYB9 648 aa11.95□□□□□ -0.5
RPUSD4-208ENST00000533628 KIF2BQ8N4N8 673 aa11.95□□□□□ -0.5
RPUSD4-208ENST00000533628 PIWIL2Q8TC59 973 aaKnown RBP11.95□□□□□ -0.5
RPUSD4-208ENST00000533628 PPP1R14BQ96C90 147 aa11.95□□□□□ -0.5
RPUSD4-208ENST00000533628 CCDC28BQ9BUN5 200 aa11.95□□□□□ -0.5
RPUSD4-208ENST00000533628 MEAF6Q9HAF1 191 aa11.95□□□□□ -0.5
RPUSD4-208ENST00000533628 NECTIN3Q9NQS3 549 aa11.95□□□□□ -0.5
RPUSD4-208ENST00000533628 MARCOQ9UEW3 520 aaPredicted RBP11.95□□□□□ -0.5
RPUSD4-208ENST00000533628 DLGAP4Q9Y2H0 992 aa11.95□□□□□ -0.5
RPUSD4-208ENST00000533628 MMACHCQ9Y4U1 282 aa11.95□□□□□ -0.5
RPUSD4-208ENST00000533628 SCN2AQ99250 2005 aa11.95□□□□□ -0.5
RPUSD4-208ENST00000533628 CFAP47Q6ZTR5 3102 aa11.95□□□□□ -0.5
RPUSD4-208ENST00000533628 WASHC1A8K0Z3 465 aa11.95□□□□□ -0.5
RPUSD4-208ENST00000533628 PSMD12O00232 456 aaPredicted RBP11.95□□□□□ -0.5
RPUSD4-208ENST00000533628 SDHDO14521 159 aa11.95□□□□□ -0.5
RPUSD4-208ENST00000533628 HDAC3O15379 428 aa11.95□□□□□ -0.5
RPUSD4-208ENST00000533628 ALOX12BO75342 701 aa11.95□□□□□ -0.5
RPUSD4-208ENST00000533628 SEC22BO75396 215 aa11.95□□□□□ -0.5
RPUSD4-208ENST00000533628 PRKRAO75569 313 aaKnown RBP11.95□□□□□ -0.5
RPUSD4-208ENST00000533628 AIFM1O95831 613 aa11.95□□□□□ -0.5
RPUSD4-208ENST00000533628 HEXBP07686 556 aa11.95□□□□□ -0.5
RPUSD4-208ENST00000533628 OTX2P32243 289 aa11.95□□□□□ -0.5
RPUSD4-208ENST00000533628 MAPK12P53778 367 aa11.95□□□□□ -0.5
RPUSD4-208ENST00000533628 HSD17B7P56937 341 aa11.95□□□□□ -0.5
RPUSD4-208ENST00000533628 ST3GAL2Q16842 350 aa11.95□□□□□ -0.5
RPUSD4-208ENST00000533628 MINDY4Q4G0A6 757 aa11.95□□□□□ -0.5
RPUSD4-208ENST00000533628 C6orf136Q5SQH8 315 aa11.95□□□□□ -0.5
RPUSD4-208ENST00000533628 RIPOR1Q6ZS17 1223 aa11.95□□□□□ -0.5
RPUSD4-208ENST00000533628 MRGPREQ86SM8 312 aa11.95□□□□□ -0.5
RPUSD4-208ENST00000533628 C16orf78Q8WTQ4 265 aa11.95□□□□□ -0.5
RPUSD4-208ENST00000533628 TSLPQ969D9 159 aa11.95□□□□□ -0.5
RPUSD4-208ENST00000533628 ANKRD9Q96BM1 317 aaPredicted RBP11.95□□□□□ -0.5
RPUSD4-208ENST00000533628 CRELD1Q96HD1 420 aa11.95□□□□□ -0.5
RPUSD4-208ENST00000533628 PPP3R2Q96LZ3 170 aa11.95□□□□□ -0.5
RPUSD4-208ENST00000533628 EBPLQ9BY08 206 aa11.95□□□□□ -0.5
RPUSD4-208ENST00000533628 NUF2Q9BZD4 464 aa11.95□□□□□ -0.5
RPUSD4-208ENST00000533628 PRDM9Q9NQV7 894 aa11.95□□□□□ -0.5
RPUSD4-208ENST00000533628 PRTFDC1Q9NRG1 225 aa11.95□□□□□ -0.5
RPUSD4-208ENST00000533628 POLR3HQ9Y535 204 aaPredicted RBP11.95□□□□□ -0.5
RPUSD4-208ENST00000533628 TPRP12270 2363 aaKnown RBP11.94□□□□□ -0.5
RPUSD4-208ENST00000533628 BLACEA4D250 179 aa11.94□□□□□ -0.5
RPUSD4-208ENST00000533628 CDC14CA4D256 554 aa11.94□□□□□ -0.5
RPUSD4-208ENST00000533628 SLCO1B7G3V0H7 640 aa11.94□□□□□ -0.5
RPUSD4-208ENST00000533628 PRMT3O60678 531 aa11.94□□□□□ -0.5
RPUSD4-208ENST00000533628 CTNSO60931 367 aa11.94□□□□□ -0.5
RPUSD4-208ENST00000533628 PRKAR1AP10644 381 aa11.94□□□□□ -0.5
RPUSD4-208ENST00000533628 KITP10721 976 aa11.94□□□□□ -0.5
RPUSD4-208ENST00000533628 ZNF24P17028 368 aa11.94□□□□□ -0.5
RPUSD4-208ENST00000533628 MAOAP21397 527 aa11.94□□□□□ -0.5
RPUSD4-208ENST00000533628 IGLV3-21P80748 117 aaPredicted RBP11.94□□□□□ -0.5
RPUSD4-208ENST00000533628 LANCL3Q6ZV70 420 aa11.94□□□□□ -0.5
RPUSD4-208ENST00000533628 LARP4Q71RC2 724 aaKnown RBP eCLIP11.94□□□□□ -0.5
RPUSD4-208ENST00000533628 CRLF3Q8IUI8 442 aa11.94□□□□□ -0.5
RPUSD4-208ENST00000533628 MMP21Q8N119 569 aa11.94□□□□□ -0.5
RPUSD4-208ENST00000533628 EFCAB3Q8N7B9 438 aa11.94□□□□□ -0.5
RPUSD4-208ENST00000533628 PRORYQ9H606 182 aa11.94□□□□□ -0.5
RPUSD4-208ENST00000533628 AKTIPQ9H8T0 292 aa11.94□□□□□ -0.5
RPUSD4-208ENST00000533628 RIC8BQ9NVN3 520 aa11.94□□□□□ -0.5
RPUSD4-208ENST00000533628 HEY2Q9UBP5 337 aa11.94□□□□□ -0.5
RPUSD4-208ENST00000533628 VTI1BQ9UEU0 232 aa11.94□□□□□ -0.5
RPUSD4-208ENST00000533628 CES1P1Q9UKY3 287 aa11.94□□□□□ -0.5
RPUSD4-208ENST00000533628 EXO1Q9UQ84 846 aaKnown RBP11.94□□□□□ -0.5
RPUSD4-208ENST00000533628 PCDHA9Q9Y5H5 950 aa11.94□□□□□ -0.5
RPUSD4-208ENST00000533628 MAP1BP46821 2468 aaKnown RBP11.94□□□□□ -0.5
RPUSD4-208ENST00000533628 ANKRD11Q6UB99 2663 aaPredicted RBP11.93□□□□□ -0.5
RPUSD4-208ENST00000533628 TCRBV16S1A1N1A0A5B0 115 aa11.93□□□□□ -0.5
RPUSD4-208ENST00000533628 ARHGAP10A1A4S6 786 aa11.93□□□□□ -0.5
RPUSD4-208ENST00000533628 TCP11X1B4DZS4 312 aa11.93□□□□□ -0.5
RPUSD4-208ENST00000533628 PCDH17O14917 1159 aa11.93□□□□□ -0.5
RPUSD4-208ENST00000533628 PGRMC2O15173 223 aa11.93□□□□□ -0.5
RPUSD4-208ENST00000533628 ANXA4P09525 319 aaPredicted RBP11.93□□□□□ -0.5
RPUSD4-208ENST00000533628 ALOX15P16050 662 aaPredicted RBP11.93□□□□□ -0.5
RPUSD4-208ENST00000533628 TACR1P25103 407 aa11.93□□□□□ -0.5
RPUSD4-208ENST00000533628 RPL38P63173 70 aaKnown RBP11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms