RNA–Protein interactions for RNA: ENST00000533438.1

CLCF1-202, Transcript of cardiotrophin like cytokine factor 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CLCF1, Length 967 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1-202ENST00000533438 IRF9Q00978 393 aa10.52□□□□□ -0.73
CLCF1-202ENST00000533438 TGM3Q08188 693 aa10.52□□□□□ -0.73
CLCF1-202ENST00000533438 ELAVL1Q15717 326 aaKnown RBP10.52□□□□□ -0.73
CLCF1-202ENST00000533438 HIST2H2ACQ16777 129 aaPredicted RBP10.52□□□□□ -0.73
CLCF1-202ENST00000533438 PAGE2BQ5JRK9 111 aa10.52□□□□□ -0.73
CLCF1-202ENST00000533438 HIST2H2AA3Q6FI13 130 aa10.52□□□□□ -0.73
CLCF1-202ENST00000533438 XKRXQ6PP77 449 aa10.52□□□□□ -0.73
CLCF1-202ENST00000533438 FGD2Q7Z6J4 655 aa10.52□□□□□ -0.73
CLCF1-202ENST00000533438 CLNKQ7Z7G1 428 aa10.52□□□□□ -0.73
CLCF1-202ENST00000533438 TBC1D1Q86TI0 1168 aaPredicted RBP10.52□□□□□ -0.73
CLCF1-202ENST00000533438 SULF2Q8IWU5 870 aa10.52□□□□□ -0.73
CLCF1-202ENST00000533438 CENPLQ8N0S6 344 aaPredicted RBP10.52□□□□□ -0.73
CLCF1-202ENST00000533438 CYP4Z2PQ8N1L4 340 aa10.52□□□□□ -0.73
CLCF1-202ENST00000533438 POGLUT1Q8NBL1 392 aa10.52□□□□□ -0.73
CLCF1-202ENST00000533438 SRFBP1Q8NEF9 429 aaKnown RBP10.52□□□□□ -0.73
CLCF1-202ENST00000533438 C16orf52Q8NHV5 167 aa10.52□□□□□ -0.73
CLCF1-202ENST00000533438 NXNL1Q96CM4 212 aa10.52□□□□□ -0.73
CLCF1-202ENST00000533438 MAPKAP1Q9BPZ7 522 aa10.52□□□□□ -0.73
CLCF1-202ENST00000533438 TBCDQ9BTW9 1192 aa10.52□□□□□ -0.73
CLCF1-202ENST00000533438 ROGDIQ9GZN7 287 aa10.52□□□□□ -0.73
CLCF1-202ENST00000533438 LYRM4Q9HD34 91 aa10.52□□□□□ -0.73
CLCF1-202ENST00000533438 VTI1BQ9UEU0 232 aa10.52□□□□□ -0.73
CLCF1-202ENST00000533438 DCDC2Q9UHG0 476 aa10.52□□□□□ -0.73
CLCF1-202ENST00000533438 FBXW2Q9UKT8 454 aa10.52□□□□□ -0.73
CLCF1-202ENST00000533438 YARS2Q9Y2Z4 477 aaKnown RBP10.52□□□□□ -0.73
CLCF1-202ENST00000533438 MEMO1Q9Y316 297 aa10.52□□□□□ -0.73
CLCF1-202ENST00000533438 CCDC189A1A4V9 331 aa10.51□□□□□ -0.73
CLCF1-202ENST00000533438 SUPT3HB4E1H0 165 aa10.51□□□□□ -0.73
CLCF1-202ENST00000533438 KLRC4-KLRK1H3BQV0 150 aa10.51□□□□□ -0.73
CLCF1-202ENST00000533438 UBXN8O00124 270 aa10.51□□□□□ -0.73
CLCF1-202ENST00000533438 RTCAO00442 366 aaKnown RBP10.51□□□□□ -0.73
CLCF1-202ENST00000533438 COPEO14579 308 aa10.51□□□□□ -0.73
CLCF1-202ENST00000533438 ZNHIT1O43257 154 aa10.51□□□□□ -0.73
CLCF1-202ENST00000533438 SUPT3HO75486 399 aa10.51□□□□□ -0.73
CLCF1-202ENST00000533438 ZFAND5O76080 213 aa10.51□□□□□ -0.73
CLCF1-202ENST00000533438 KLHL2O95198 593 aa10.51□□□□□ -0.73
CLCF1-202ENST00000533438 ATP5A1P25705 553 aaKnown RBP10.51□□□□□ -0.73
CLCF1-202ENST00000533438 SSR4P51571 173 aa10.51□□□□□ -0.73
CLCF1-202ENST00000533438 RCN2Q14257 317 aa10.51□□□□□ -0.73
CLCF1-202ENST00000533438 ZNF630Q2M218 657 aaPredicted RBP10.51□□□□□ -0.73
CLCF1-202ENST00000533438 FAM83EQ2M2I3 478 aa10.51□□□□□ -0.73
CLCF1-202ENST00000533438 TSNAXIP1Q2TAA8 658 aa10.51□□□□□ -0.73
CLCF1-202ENST00000533438 KRTAP21-3Q3LHN1 58 aa10.51□□□□□ -0.73
CLCF1-202ENST00000533438 TMEM35AQ53FP2 167 aa10.51□□□□□ -0.73
CLCF1-202ENST00000533438 GRHL2Q6ISB3 625 aa10.51□□□□□ -0.73
CLCF1-202ENST00000533438 MED27Q6P2C8 311 aa10.51□□□□□ -0.73
CLCF1-202ENST00000533438 MDGA2Q7Z553 956 aa10.51□□□□□ -0.73
CLCF1-202ENST00000533438 PLD6Q8N2A8 252 aaKnown RBP10.51□□□□□ -0.73
CLCF1-202ENST00000533438 TMEM132CQ8N3T6 1108 aa10.51□□□□□ -0.73
CLCF1-202ENST00000533438 TMEM156Q8N614 296 aa10.51□□□□□ -0.73
CLCF1-202ENST00000533438 ACOT4Q8N9L9 421 aa10.51□□□□□ -0.73
CLCF1-202ENST00000533438 ZFP62Q8NB50 900 aaPredicted RBP10.51□□□□□ -0.73
CLCF1-202ENST00000533438 MORN4Q8NDC4 146 aa10.51□□□□□ -0.73
CLCF1-202ENST00000533438 OR7G3Q8NG95 312 aa10.51□□□□□ -0.73
CLCF1-202ENST00000533438 RHEBL1Q8TAI7 183 aa10.51□□□□□ -0.73
CLCF1-202ENST00000533438 PTPMT1Q8WUK0 201 aaPredicted RBP10.51□□□□□ -0.73
CLCF1-202ENST00000533438 KCTD4Q8WVF5 259 aa10.51□□□□□ -0.73
CLCF1-202ENST00000533438 DAZLQ92904 295 aaKnown RBP10.51□□□□□ -0.73
CLCF1-202ENST00000533438 UBE2E3Q969T4 207 aa10.51□□□□□ -0.73
CLCF1-202ENST00000533438 GPR78Q96P69 363 aa10.51□□□□□ -0.73
CLCF1-202ENST00000533438 ALOXE3Q9BYJ1 711 aa10.51□□□□□ -0.73
CLCF1-202ENST00000533438 RUBCNLQ9H714 662 aa10.51□□□□□ -0.73
CLCF1-202ENST00000533438 LIN28AQ9H9Z2 209 aaKnown RBP10.51□□□□□ -0.73
CLCF1-202ENST00000533438 OPTCQ9UBM4 332 aa10.51□□□□□ -0.73
CLCF1-202ENST00000533438 GRID1Q9ULK0 1009 aa10.51□□□□□ -0.73
CLCF1-202ENST00000533438 CACNA1CQ13936 2221 aa10.51□□□□□ -0.73
CLCF1-202ENST00000533438 ZFHX3Q15911 3703 aa10.5□□□□□ -0.73
CLCF1-202ENST00000533438 MYOCOSA0A1B0GUC4 107 aa10.5□□□□□ -0.73
CLCF1-202ENST00000533438 TMEM120BA0PK00 339 aa10.5□□□□□ -0.73
CLCF1-202ENST00000533438 SYCE1LA8MT33 242 aa10.5□□□□□ -0.73
CLCF1-202ENST00000533438 ADAM10O14672 748 aa10.5□□□□□ -0.73
CLCF1-202ENST00000533438 TM9SF1O15321 606 aa10.5□□□□□ -0.73
CLCF1-202ENST00000533438 PEX1O43933 1283 aa10.5□□□□□ -0.73
CLCF1-202ENST00000533438 KLK8O60259 260 aa10.5□□□□□ -0.73
CLCF1-202ENST00000533438 LDB3O75112 727 aa10.5□□□□□ -0.73
CLCF1-202ENST00000533438 SPAG7O75391 227 aa10.5□□□□□ -0.73
CLCF1-202ENST00000533438 OR2J2O76002 312 aa10.5□□□□□ -0.73
CLCF1-202ENST00000533438 ZWINTO95229 277 aa10.5□□□□□ -0.73
CLCF1-202ENST00000533438 TGFB1P01137 390 aa10.5□□□□□ -0.73
CLCF1-202ENST00000533438 IFNA16P05015 189 aa10.5□□□□□ -0.73
CLCF1-202ENST00000533438 ESRRAP11474 423 aaPredicted RBP10.5□□□□□ -0.73
CLCF1-202ENST00000533438 PCNAP12004 261 aa10.5□□□□□ -0.73
CLCF1-202ENST00000533438 ABOP16442 354 aa10.5□□□□□ -0.73
CLCF1-202ENST00000533438 HIST1H1TP22492 207 aaPredicted RBP10.5□□□□□ -0.73
CLCF1-202ENST00000533438 HTR1EP28566 365 aa10.5□□□□□ -0.73
CLCF1-202ENST00000533438 SERPINB1P30740 379 aa10.5□□□□□ -0.73
CLCF1-202ENST00000533438 PTGER1P34995 402 aa10.5□□□□□ -0.73
CLCF1-202ENST00000533438 HK2P52789 917 aa10.5□□□□□ -0.73
CLCF1-202ENST00000533438 PPP2R2AP63151 447 aa10.5□□□□□ -0.73
CLCF1-202ENST00000533438 IGLV3-21P80748 117 aaPredicted RBP10.5□□□□□ -0.73
CLCF1-202ENST00000533438 STX4Q12846 297 aa10.5□□□□□ -0.73
CLCF1-202ENST00000533438 SERTAD2Q14140 314 aa10.5□□□□□ -0.73
CLCF1-202ENST00000533438 ACAP2Q15057 778 aa10.5□□□□□ -0.73
CLCF1-202ENST00000533438 CDSNQ15517 529 aa10.5□□□□□ -0.73
CLCF1-202ENST00000533438 DEPDC1Q5TB30 811 aa10.5□□□□□ -0.73
CLCF1-202ENST00000533438 KHDRBS2Q5VWX1 349 aaKnown RBP10.5□□□□□ -0.73
CLCF1-202ENST00000533438 C16orf47Q6ZP98 133 aaPredicted RBP10.5□□□□□ -0.73
CLCF1-202ENST00000533438 NCCRP1Q6ZVX7 275 aaPredicted RBP10.5□□□□□ -0.73
CLCF1-202ENST00000533438 DOLPP1Q86YN1 238 aa10.5□□□□□ -0.73
CLCF1-202ENST00000533438 GPALPP1Q8IXQ4 340 aa10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms