RNA–Protein interactions for RNA: ENST00000532602.1

PCDHA9-202, Transcript of protocadherin alpha 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA9, Length 6,293 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA9-202ENST00000532602 MEDAGQ5VYS4 303 aa14.17□□□□□ -0.14
PCDHA9-202ENST00000532602 RTL10Q7L3V2 364 aa14.17□□□□□ -0.14
PCDHA9-202ENST00000532602 OR4N5Q8IXE1 308 aa14.17□□□□□ -0.14
PCDHA9-202ENST00000532602 HPS1Q92902 700 aa14.17□□□□□ -0.14
PCDHA9-202ENST00000532602 LPAR4Q99677 370 aa14.17□□□□□ -0.14
PCDHA9-202ENST00000532602 RFPL1O75677 317 aa14.16□□□□□ -0.14
PCDHA9-202ENST00000532602 CLPXO76031 633 aa14.16□□□□□ -0.14
PCDHA9-202ENST00000532602 JUPP14923 745 aa14.16□□□□□ -0.14
PCDHA9-202ENST00000532602 HNRNPA2B1P22626 353 aaKnown RBP14.16□□□□□ -0.14
PCDHA9-202ENST00000532602 C6orf136Q5SQH8 315 aa14.16□□□□□ -0.14
PCDHA9-202ENST00000532602 TMEM107Q6UX40 140 aa14.16□□□□□ -0.14
PCDHA9-202ENST00000532602 PLEKHG7Q6ZR37 379 aa14.16□□□□□ -0.14
PCDHA9-202ENST00000532602 TREML1Q86YW5 311 aa14.16□□□□□ -0.14
PCDHA9-202ENST00000532602 ZNF283Q8N7M2 679 aa14.16□□□□□ -0.14
PCDHA9-202ENST00000532602 PHOSPHO2Q8TCD6 241 aa14.16□□□□□ -0.14
PCDHA9-202ENST00000532602 EIF3FO00303 357 aaPredicted RBP14.16□□□□□ -0.14
PCDHA9-202ENST00000532602 ZNF821O75541 412 aaPredicted RBP14.16□□□□□ -0.14
PCDHA9-202ENST00000532602 MT-ND5P03915 603 aa14.16□□□□□ -0.14
PCDHA9-202ENST00000532602 CKMT2P17540 419 aa14.16□□□□□ -0.14
PCDHA9-202ENST00000532602 CD68P34810 354 aaPredicted RBP14.16□□□□□ -0.14
PCDHA9-202ENST00000532602 GPR143P51810 404 aa14.16□□□□□ -0.14
PCDHA9-202ENST00000532602 ACY1Q03154 408 aa14.16□□□□□ -0.14
PCDHA9-202ENST00000532602 SLC44A3Q8N4M1 653 aa14.16□□□□□ -0.14
PCDHA9-202ENST00000532602 FGF13Q92913 245 aa14.16□□□□□ -0.14
PCDHA9-202ENST00000532602 CLSTN3Q9BQT9 956 aa14.16□□□□□ -0.14
PCDHA9-202ENST00000532602 RNF38Q9H0F5 515 aa14.16□□□□□ -0.14
PCDHA9-202ENST00000532602 FKBP14Q9NWM8 211 aa14.16□□□□□ -0.14
PCDHA9-202ENST00000532602 MALT1Q9UDY8 824 aa14.16□□□□□ -0.14
PCDHA9-202ENST00000532602 FGF3P11487 239 aaPredicted RBP14.16□□□□□ -0.14
PCDHA9-202ENST00000532602 DIO3P55073 304 aa14.16□□□□□ -0.14
PCDHA9-202ENST00000532602 HHEXQ03014 270 aa14.16□□□□□ -0.14
PCDHA9-202ENST00000532602 ABRAXAS2Q15018 415 aa14.16□□□□□ -0.14
PCDHA9-202ENST00000532602 C1orf94Q6P1W5 598 aa14.16□□□□□ -0.14
PCDHA9-202ENST00000532602 TRIM73Q86UV7 250 aa14.16□□□□□ -0.14
PCDHA9-202ENST00000532602 GID4Q8IVV7 300 aa14.16□□□□□ -0.14
PCDHA9-202ENST00000532602 NUP43Q8NFH3 380 aa14.16□□□□□ -0.14
PCDHA9-202ENST00000532602 BORCS8Q96FH0 119 aa14.16□□□□□ -0.14
PCDHA9-202ENST00000532602 EPHA6Q9UF33 1036 aa14.16□□□□□ -0.14
PCDHA9-202ENST00000532602 GNG8Q9UK08 70 aa14.16□□□□□ -0.14
PCDHA9-202ENST00000532602 RTCAO00442 366 aaKnown RBP14.16□□□□□ -0.14
PCDHA9-202ENST00000532602 VILLO15195 856 aa14.16□□□□□ -0.14
PCDHA9-202ENST00000532602 S1PR1P21453 382 aa14.16□□□□□ -0.14
PCDHA9-202ENST00000532602 PRKACGP22612 351 aa14.16□□□□□ -0.14
PCDHA9-202ENST00000532602 CLDN10P78369 228 aa14.16□□□□□ -0.14
PCDHA9-202ENST00000532602 SLC36A3Q495N2 470 aa14.16□□□□□ -0.14
PCDHA9-202ENST00000532602 PRAMEF17Q5VTA0 474 aa14.16□□□□□ -0.14
PCDHA9-202ENST00000532602 RNF220Q5VTB9 566 aa14.16□□□□□ -0.14
PCDHA9-202ENST00000532602 TMPRSS11EQ9UL52 423 aa14.16□□□□□ -0.14
PCDHA9-202ENST00000532602 MYH15Q9Y2K3 1946 aa14.16□□□□□ -0.14
PCDHA9-202ENST00000532602 SCO2O43819 266 aa14.16□□□□□ -0.14
PCDHA9-202ENST00000532602 DPP6P42658 865 aa14.16□□□□□ -0.14
PCDHA9-202ENST00000532602 DSC1Q08554 894 aa14.16□□□□□ -0.14
PCDHA9-202ENST00000532602 ZFAND4Q86XD8 727 aa14.16□□□□□ -0.14
PCDHA9-202ENST00000532602 SLC46A2Q9BY10 475 aa14.16□□□□□ -0.14
PCDHA9-202ENST00000532602 C1orf21Q9H246 121 aa14.16□□□□□ -0.14
PCDHA9-202ENST00000532602 CDKL1Q00532 357 aa14.15□□□□□ -0.14
PCDHA9-202ENST00000532602 RPA4Q13156 261 aa14.15□□□□□ -0.14
PCDHA9-202ENST00000532602 DEFB133Q30KQ1 61 aa14.15□□□□□ -0.14
PCDHA9-202ENST00000532602 C4orf46Q504U0 113 aa14.15□□□□□ -0.14
PCDHA9-202ENST00000532602 ZNF615Q8N8J6 731 aa14.15□□□□□ -0.14
PCDHA9-202ENST00000532602 TMEM121BQ9BXQ6 578 aaPredicted RBP14.15□□□□□ -0.14
PCDHA9-202ENST00000532602 SMURF1Q9HCE7 757 aa14.15□□□□□ -0.14
PCDHA9-202ENST00000532602 A0A1W2PPL8 197 aa14.15□□□□□ -0.14
PCDHA9-202ENST00000532602 MECP2P51608 486 aaKnown RBP14.15□□□□□ -0.14
PCDHA9-202ENST00000532602 RHDQ02161 417 aa14.15□□□□□ -0.14
PCDHA9-202ENST00000532602 TECRLQ5HYJ1 363 aa14.15□□□□□ -0.14
PCDHA9-202ENST00000532602 SEC14L1Q92503 715 aa14.15□□□□□ -0.14
PCDHA9-202ENST00000532602 NSMAFQ92636 917 aa14.15□□□□□ -0.14
PCDHA9-202ENST00000532602 HSPBAP1Q96EW2 488 aa14.15□□□□□ -0.14
PCDHA9-202ENST00000532602 HS6ST2Q96MM7 605 aa14.15□□□□□ -0.14
PCDHA9-202ENST00000532602 GFM1Q96RP9 751 aaKnown RBP14.15□□□□□ -0.14
PCDHA9-202ENST00000532602 HEBP1Q9NRV9 189 aa14.15□□□□□ -0.14
PCDHA9-202ENST00000532602 GPRC5BQ9NZH0 403 aa14.15□□□□□ -0.14
PCDHA9-202ENST00000532602 ANKRD36CQ5JPF3 1778 aa14.15□□□□□ -0.14
PCDHA9-202ENST00000532602 PDE4DIPQ5VU43 2346 aa14.15□□□□□ -0.14
PCDHA9-202ENST00000532602 NPIPB15A6NHN6 443 aaPredicted RBP14.15□□□□□ -0.14
PCDHA9-202ENST00000532602 ALDOAP04075 364 aaKnown RBP14.15□□□□□ -0.14
PCDHA9-202ENST00000532602 P04436 131 aa14.15□□□□□ -0.14
PCDHA9-202ENST00000532602 DCDC1P59894 354 aa14.15□□□□□ -0.14
PCDHA9-202ENST00000532602 ATG9BQ674R7 924 aa14.15□□□□□ -0.14
PCDHA9-202ENST00000532602 RELL1Q8IUW5 271 aa14.15□□□□□ -0.14
PCDHA9-202ENST00000532602 FANK1Q8TC84 345 aa14.15□□□□□ -0.14
PCDHA9-202ENST00000532602 BIRC7Q96CA5 298 aa14.15□□□□□ -0.14
PCDHA9-202ENST00000532602 AURKBQ96GD4 344 aaPredicted RBP14.15□□□□□ -0.14
PCDHA9-202ENST00000532602 WDR77Q9BQA1 342 aaPredicted RBP14.15□□□□□ -0.14
PCDHA9-202ENST00000532602 SEC14L4Q9UDX3 406 aa14.15□□□□□ -0.14
PCDHA9-202ENST00000532602 EXOSC1Q9Y3B2 195 aaKnown RBP14.15□□□□□ -0.14
PCDHA9-202ENST00000532602 SPO11Q9Y5K1 396 aa14.15□□□□□ -0.14
PCDHA9-202ENST00000532602 GLI3P10071 1580 aa14.15□□□□□ -0.14
PCDHA9-202ENST00000532602 ATF6P18850 670 aa14.15□□□□□ -0.14
PCDHA9-202ENST00000532602 ERVFC1P60507 584 aa14.15□□□□□ -0.14
PCDHA9-202ENST00000532602 SLC3A1Q07837 685 aa14.15□□□□□ -0.14
PCDHA9-202ENST00000532602 SPIN3Q5JUX0 258 aa14.15□□□□□ -0.14
PCDHA9-202ENST00000532602 TTLL10Q6ZVT0 673 aa14.15□□□□□ -0.14
PCDHA9-202ENST00000532602 ZSWIM9Q86XI8 627 aa14.15□□□□□ -0.14
PCDHA9-202ENST00000532602 OR8J3Q8NGG0 315 aa14.15□□□□□ -0.14
PCDHA9-202ENST00000532602 KLF16Q9BXK1 252 aaPredicted RBP14.15□□□□□ -0.14
PCDHA9-202ENST00000532602 ITPAQ9BY32 194 aa14.15□□□□□ -0.14
PCDHA9-202ENST00000532602 A0A096LPI6 279 aa14.15□□□□□ -0.14
PCDHA9-202ENST00000532602 PRKCDQ05655 676 aa14.15□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms