RNA–Protein interactions for RNA: ENST00000531480.2

CPSF1-206, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 3

Gene CPSF1, Length 789 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-206ENST00000531480 FAAH2Q6GMR7 532 aa13.55□□□□□ -0.24
CPSF1-206ENST00000531480 OR52E8Q6IFG1 317 aa13.55□□□□□ -0.24
CPSF1-206ENST00000531480 SLC48A1Q6P1K1 146 aa13.55□□□□□ -0.24
CPSF1-206ENST00000531480 RIPOR1Q6ZS17 1223 aa13.55□□□□□ -0.24
CPSF1-206ENST00000531480 CLNKQ7Z7G1 428 aa13.55□□□□□ -0.24
CPSF1-206ENST00000531480 CPLX4Q7Z7G2 160 aa13.55□□□□□ -0.24
CPSF1-206ENST00000531480 DDIASQ8IXT1 998 aa13.55□□□□□ -0.24
CPSF1-206ENST00000531480 NFAM1Q8NET5 270 aaPredicted RBP13.55□□□□□ -0.24
CPSF1-206ENST00000531480 C16orf78Q8WTQ4 265 aa13.55□□□□□ -0.24
CPSF1-206ENST00000531480 EXTL1Q92935 676 aa13.55□□□□□ -0.24
CPSF1-206ENST00000531480 ZNF764Q96H86 408 aaPredicted RBP13.55□□□□□ -0.24
CPSF1-206ENST00000531480 PPP3R2Q96LZ3 170 aa13.55□□□□□ -0.24
CPSF1-206ENST00000531480 TRIM55Q9BYV6 548 aa13.55□□□□□ -0.24
CPSF1-206ENST00000531480 MYNNQ9NPC7 610 aa13.55□□□□□ -0.24
CPSF1-206ENST00000531480 ASIC5Q9NY37 505 aa13.55□□□□□ -0.24
CPSF1-206ENST00000531480 EHD3Q9NZN3 535 aa13.55□□□□□ -0.24
CPSF1-206ENST00000531480 DLGAP4Q9Y2H0 992 aa13.55□□□□□ -0.24
CPSF1-206ENST00000531480 PIEZO2Q9H5I5 2752 aa13.55□□□□□ -0.24
CPSF1-206ENST00000531480 BOD1L1Q8NFC6 3051 aa13.55□□□□□ -0.24
CPSF1-206ENST00000531480 CPAMD8Q8IZJ3 1885 aa13.55□□□□□ -0.24
CPSF1-206ENST00000531480 CROCCQ5TZA2 2017 aa13.54□□□□□ -0.24
CPSF1-206ENST00000531480 NSG1A0A0A6YYJ2 146 aa13.54□□□□□ -0.24
CPSF1-206ENST00000531480 SAGE2PA6NJ88 616 aa13.54□□□□□ -0.24
CPSF1-206ENST00000531480 ARGFXA6NJG6 315 aa13.54□□□□□ -0.24
CPSF1-206ENST00000531480 SLCO1B7G3V0H7 640 aa13.54□□□□□ -0.24
CPSF1-206ENST00000531480 PGRMC2O15173 223 aa13.54□□□□□ -0.24
CPSF1-206ENST00000531480 HDAC3O15379 428 aa13.54□□□□□ -0.24
CPSF1-206ENST00000531480 LDB3O75112 727 aa13.54□□□□□ -0.24
CPSF1-206ENST00000531480 SEC22BO75396 215 aa13.54□□□□□ -0.24
CPSF1-206ENST00000531480 SKAP2O75563 359 aaPredicted RBP13.54□□□□□ -0.24
CPSF1-206ENST00000531480 GPR75O95800 540 aa13.54□□□□□ -0.24
CPSF1-206ENST00000531480 ANXA4P09525 319 aaPredicted RBP13.54□□□□□ -0.24
CPSF1-206ENST00000531480 ICAM2P13598 275 aa13.54□□□□□ -0.24
CPSF1-206ENST00000531480 LSP1P33241 339 aa13.54□□□□□ -0.24
CPSF1-206ENST00000531480 GALNSP34059 522 aa13.54□□□□□ -0.24
CPSF1-206ENST00000531480 GPR143P51810 404 aa13.54□□□□□ -0.24
CPSF1-206ENST00000531480 OR4D2P58180 307 aa13.54□□□□□ -0.24
CPSF1-206ENST00000531480 TAS2R50P59544 299 aa13.54□□□□□ -0.24
CPSF1-206ENST00000531480 GUCY1A3Q02108 690 aa13.54□□□□□ -0.24
CPSF1-206ENST00000531480 FOLH1Q04609 750 aa13.54□□□□□ -0.24
CPSF1-206ENST00000531480 EEF1A2Q05639 463 aaKnown RBP13.54□□□□□ -0.24
CPSF1-206ENST00000531480 ELAVL1Q15717 326 aaKnown RBP13.54□□□□□ -0.24
CPSF1-206ENST00000531480 CEBPEQ15744 281 aa13.54□□□□□ -0.24
CPSF1-206ENST00000531480 FAM71E1Q6IPT2 247 aa13.54□□□□□ -0.24
CPSF1-206ENST00000531480 IKBIPQ70UQ0 350 aa13.54□□□□□ -0.24
CPSF1-206ENST00000531480 PIWIL2Q8TC59 973 aaKnown RBP13.54□□□□□ -0.24
CPSF1-206ENST00000531480 UCN3Q969E3 161 aa13.54□□□□□ -0.24
CPSF1-206ENST00000531480 CHMP6Q96FZ7 201 aa13.54□□□□□ -0.24
CPSF1-206ENST00000531480 MAELQ96JY0 434 aaKnown RBP13.54□□□□□ -0.24
CPSF1-206ENST00000531480 UBL7Q96S82 380 aaPredicted RBP13.54□□□□□ -0.24
CPSF1-206ENST00000531480 ALOXE3Q9BYJ1 711 aa13.54□□□□□ -0.24
CPSF1-206ENST00000531480 EPN3Q9H201 632 aa13.54□□□□□ -0.24
CPSF1-206ENST00000531480 ADNPQ9H2P0 1102 aa13.54□□□□□ -0.24
CPSF1-206ENST00000531480 WDR41Q9HAD4 459 aa13.54□□□□□ -0.24
CPSF1-206ENST00000531480 ADAP2Q9NPF8 381 aa13.54□□□□□ -0.24
CPSF1-206ENST00000531480 ATP13A2Q9NQ11 1180 aa13.54□□□□□ -0.24
CPSF1-206ENST00000531480 TAS2R7Q9NYW3 318 aa13.54□□□□□ -0.24
CPSF1-206ENST00000531480 HEY2Q9UBP5 337 aa13.54□□□□□ -0.24
CPSF1-206ENST00000531480 EXO1Q9UQ84 846 aaKnown RBP13.54□□□□□ -0.24
CPSF1-206ENST00000531480 PCDHGA9Q9Y5G4 932 aaKnown RBP13.54□□□□□ -0.24
CPSF1-206ENST00000531480 GNG14A0A1W2PPG7 69 aa13.53□□□□□ -0.24
CPSF1-206ENST00000531480 WASHC1A8K0Z3 465 aa13.53□□□□□ -0.24
CPSF1-206ENST00000531480 TBX19O60806 448 aa13.53□□□□□ -0.24
CPSF1-206ENST00000531480 SHOX2O60902 331 aaPredicted RBP13.53□□□□□ -0.24
CPSF1-206ENST00000531480 SERPINA7P05543 415 aa13.53□□□□□ -0.24
CPSF1-206ENST00000531480 IL3P08700 152 aa13.53□□□□□ -0.24
CPSF1-206ENST00000531480 ALOX15P16050 662 aaPredicted RBP13.53□□□□□ -0.24
CPSF1-206ENST00000531480 SDC1P18827 310 aa13.53□□□□□ -0.24
CPSF1-206ENST00000531480 TACR1P25103 407 aa13.53□□□□□ -0.24
CPSF1-206ENST00000531480 POLE2P56282 527 aa13.53□□□□□ -0.24
CPSF1-206ENST00000531480 SLC26A5P58743 744 aa13.53□□□□□ -0.24
CPSF1-206ENST00000531480 HEPACAMQ14CZ8 416 aa13.53□□□□□ -0.24
CPSF1-206ENST00000531480 PDCD2Q16342 344 aaPredicted RBP13.53□□□□□ -0.24
CPSF1-206ENST00000531480 EXT1Q16394 746 aa13.53□□□□□ -0.24
CPSF1-206ENST00000531480 ATP6AP1LQ52LC2 224 aa13.53□□□□□ -0.24
CPSF1-206ENST00000531480 OGFOD2Q6N063 350 aa13.53□□□□□ -0.24
CPSF1-206ENST00000531480 PAPD4Q6PIY7 484 aaKnown RBP13.53□□□□□ -0.24
CPSF1-206ENST00000531480 LARP4Q71RC2 724 aaKnown RBP eCLIP13.53□□□□□ -0.24
CPSF1-206ENST00000531480 PARP9Q8IXQ6 854 aa13.53□□□□□ -0.24
CPSF1-206ENST00000531480 ST13P4Q8IZP2 240 aaPredicted RBP13.53□□□□□ -0.24
CPSF1-206ENST00000531480 GALNT16Q8N428 558 aa13.53□□□□□ -0.24
CPSF1-206ENST00000531480 ANKS4BQ8N8V4 417 aa13.53□□□□□ -0.24
CPSF1-206ENST00000531480 CLEC1AQ8NC01 280 aa13.53□□□□□ -0.24
CPSF1-206ENST00000531480 LSM14AQ8ND56 463 aaKnown RBP13.53□□□□□ -0.24
CPSF1-206ENST00000531480 M1APQ8TC57 530 aa13.53□□□□□ -0.24
CPSF1-206ENST00000531480 PTPMT1Q8WUK0 201 aaPredicted RBP13.53□□□□□ -0.24
CPSF1-206ENST00000531480 ZNF681Q96N22 645 aa13.53□□□□□ -0.24
CPSF1-206ENST00000531480 LPAR4Q99677 370 aa13.53□□□□□ -0.24
CPSF1-206ENST00000531480 FAIM2Q9BWQ8 316 aa13.53□□□□□ -0.24
CPSF1-206ENST00000531480 EBPLQ9BY08 206 aa13.53□□□□□ -0.24
CPSF1-206ENST00000531480 ZNF160Q9HCG1 818 aa13.53□□□□□ -0.24
CPSF1-206ENST00000531480 MMP25Q9NPA2 562 aa13.53□□□□□ -0.24
CPSF1-206ENST00000531480 POLR3HQ9Y535 204 aaPredicted RBP13.53□□□□□ -0.24
CPSF1-206ENST00000531480 BSNQ9UPA5 3926 aa13.53□□□□□ -0.24
CPSF1-206ENST00000531480 TLN1Q9Y490 2541 aaKnown RBP13.52□□□□□ -0.24
CPSF1-206ENST00000531480 IGHV3-20A0A0C4DH32 117 aa13.52□□□□□ -0.25
CPSF1-206ENST00000531480 ATP6AP2A0A1C7CYW4 349 aa13.52□□□□□ -0.25
CPSF1-206ENST00000531480 GLOD5A6NK44 160 aa13.52□□□□□ -0.25
CPSF1-206ENST00000531480 MASP2O00187 686 aa13.52□□□□□ -0.25
CPSF1-206ENST00000531480 SDHDO14521 159 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms