RNA–Protein interactions for RNA: ENST00000530546.5

USP35-207, Transcript of ubiquitin specific peptidase 35, humanhuman

TSL 1 (best)

Gene USP35, Length 2,986 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP35-207ENST00000530546 HDAC8Q9BY41 377 aa11.03□□□□□ -0.64
USP35-207ENST00000530546 B3GNT4Q9C0J1 378 aa11.03□□□□□ -0.64
USP35-207ENST00000530546 OR52A5Q9H2C5 316 aa11.03□□□□□ -0.64
USP35-207ENST00000530546 DMRT3Q9NQL9 472 aa11.03□□□□□ -0.64
USP35-207ENST00000530546 PLSCR3Q9NRY6 295 aa11.03□□□□□ -0.64
USP35-207ENST00000530546 VNN3Q9NY84 501 aa11.03□□□□□ -0.64
USP35-207ENST00000530546 PNMA8BQ9ULN7 279 aaPredicted RBP11.03□□□□□ -0.64
USP35-207ENST00000530546 FZD4Q9ULV1 537 aa11.03□□□□□ -0.64
USP35-207ENST00000530546 GPR34Q9UPC5 381 aa11.03□□□□□ -0.64
USP35-207ENST00000530546 BOLA1Q9Y3E2 137 aa11.03□□□□□ -0.64
USP35-207ENST00000530546 C17orf113A0A1B0GUU1 675 aa11.02□□□□□ -0.64
USP35-207ENST00000530546 A0A1W2PQ72 361 aa11.02□□□□□ -0.64
USP35-207ENST00000530546 SNTNA6NMZ2 147 aa11.02□□□□□ -0.64
USP35-207ENST00000530546 RGS10O43665 173 aa11.02□□□□□ -0.64
USP35-207ENST00000530546 TSPAN9O75954 239 aa11.02□□□□□ -0.64
USP35-207ENST00000530546 IL7P13232 177 aa11.02□□□□□ -0.64
USP35-207ENST00000530546 MAGP20916 626 aa11.02□□□□□ -0.64
USP35-207ENST00000530546 RPS5P46782 204 aaKnown RBP11.02□□□□□ -0.64
USP35-207ENST00000530546 MASP1P48740 699 aa11.02□□□□□ -0.64
USP35-207ENST00000530546 IL5RAQ01344 420 aa11.02□□□□□ -0.64
USP35-207ENST00000530546 ZNF33BQ06732 778 aa11.02□□□□□ -0.64
USP35-207ENST00000530546 TBRG1Q3YBR2 411 aa11.02□□□□□ -0.64
USP35-207ENST00000530546 TJAP1Q5JTD0 557 aa11.02□□□□□ -0.64
USP35-207ENST00000530546 LYPD8Q6UX82 237 aa11.02□□□□□ -0.64
USP35-207ENST00000530546 UTS2BQ765I0 119 aa11.02□□□□□ -0.64
USP35-207ENST00000530546 LRRTM4Q86VH4 590 aa11.02□□□□□ -0.64
USP35-207ENST00000530546 PTOV1Q86YD1 416 aa11.02□□□□□ -0.64
USP35-207ENST00000530546 NLGN4XQ8N0W4 816 aa11.02□□□□□ -0.64
USP35-207ENST00000530546 MMP21Q8N119 569 aa11.02□□□□□ -0.64
USP35-207ENST00000530546 EID3Q8N140 333 aa11.02□□□□□ -0.64
USP35-207ENST00000530546 FBXO15Q8NCQ5 510 aaPredicted RBP11.02□□□□□ -0.64
USP35-207ENST00000530546 CNIH3Q8TBE1 160 aa11.02□□□□□ -0.64
USP35-207ENST00000530546 FCGR1BQ92637 280 aa11.02□□□□□ -0.64
USP35-207ENST00000530546 RPL3LQ92901 407 aaKnown RBP11.02□□□□□ -0.64
USP35-207ENST00000530546 FGF14Q92915 247 aa11.02□□□□□ -0.64
USP35-207ENST00000530546 CIDECQ96AQ7 238 aaPredicted RBP11.02□□□□□ -0.64
USP35-207ENST00000530546 RAD51AP1Q96B01 352 aa11.02□□□□□ -0.64
USP35-207ENST00000530546 LINC00615Q96LM1 132 aaPredicted RBP11.02□□□□□ -0.64
USP35-207ENST00000530546 CITED4Q96RK1 184 aa11.02□□□□□ -0.64
USP35-207ENST00000530546 PHOX2BQ99453 314 aa11.02□□□□□ -0.64
USP35-207ENST00000530546 MIR1-1HGQ9H1L0 117 aa11.02□□□□□ -0.64
USP35-207ENST00000530546 SLC6A17Q9H1V8 727 aa11.02□□□□□ -0.64
USP35-207ENST00000530546 EXD2Q9NVH0 621 aa11.02□□□□□ -0.64
USP35-207ENST00000530546 TAC3Q9UHF0 121 aa11.02□□□□□ -0.64
USP35-207ENST00000530546 ABCG2Q9UNQ0 655 aa11.02□□□□□ -0.64
USP35-207ENST00000530546 EXO1Q9UQ84 846 aaKnown RBP11.02□□□□□ -0.64
USP35-207ENST00000530546 PCDHB11Q9Y5F2 797 aa11.02□□□□□ -0.64
USP35-207ENST00000530546 NUP210Q8TEM1 1887 aaPredicted RBP11.02□□□□□ -0.65
USP35-207ENST00000530546 A0A0G2JMP0 313 aa11.02□□□□□ -0.65
USP35-207ENST00000530546 OR2A25A4D2G3 310 aa11.02□□□□□ -0.65
USP35-207ENST00000530546 CCNDBP1O95273 360 aa11.02□□□□□ -0.65
USP35-207ENST00000530546 APODP05090 189 aa11.02□□□□□ -0.65
USP35-207ENST00000530546 PSMB5P28074 263 aa11.02□□□□□ -0.65
USP35-207ENST00000530546 DCTP40126 519 aa11.02□□□□□ -0.65
USP35-207ENST00000530546 TAS2R50P59544 299 aa11.02□□□□□ -0.65
USP35-207ENST00000530546 SPANXN2Q5MJ10 180 aa11.02□□□□□ -0.65
USP35-207ENST00000530546 XKRXQ6PP77 449 aa11.02□□□□□ -0.65
USP35-207ENST00000530546 ZNF852Q6ZMS4 543 aa11.02□□□□□ -0.65
USP35-207ENST00000530546 B3GNT8Q7Z7M8 397 aa11.02□□□□□ -0.65
USP35-207ENST00000530546 GALNT5Q7Z7M9 940 aa11.02□□□□□ -0.65
USP35-207ENST00000530546 SERPINA11Q86U17 422 aa11.02□□□□□ -0.65
USP35-207ENST00000530546 PDZD3Q86UT5 571 aa11.02□□□□□ -0.65
USP35-207ENST00000530546 LRRC56Q8IYG6 542 aaPredicted RBP11.02□□□□□ -0.65
USP35-207ENST00000530546 DMRTB1Q96MA1 342 aa11.02□□□□□ -0.65
USP35-207ENST00000530546 BARD1Q99728 777 aaKnown RBP11.02□□□□□ -0.65
USP35-207ENST00000530546 ITPAQ9BY32 194 aa11.02□□□□□ -0.65
USP35-207ENST00000530546 MCOLN1Q9GZU1 580 aa11.02□□□□□ -0.65
USP35-207ENST00000530546 DPEP2Q9H4A9 486 aa11.02□□□□□ -0.65
USP35-207ENST00000530546 ZBTB20Q9HC78 741 aaPredicted RBP11.02□□□□□ -0.65
USP35-207ENST00000530546 ACSL6Q9UKU0 697 aa11.02□□□□□ -0.65
USP35-207ENST00000530546 OR5K3A6NET4 321 aa11.01□□□□□ -0.65
USP35-207ENST00000530546 C12orf71A8MTZ7 269 aa11.01□□□□□ -0.65
USP35-207ENST00000530546 RTCAO00442 366 aaKnown RBP11.01□□□□□ -0.65
USP35-207ENST00000530546 PI15O43692 258 aa11.01□□□□□ -0.65
USP35-207ENST00000530546 AIREO43918 545 aa11.01□□□□□ -0.65
USP35-207ENST00000530546 C6orf47O95873 294 aa11.01□□□□□ -0.65
USP35-207ENST00000530546 MSL3P1P0C860 447 aa11.01□□□□□ -0.65
USP35-207ENST00000530546 ACP5P13686 325 aa11.01□□□□□ -0.65
USP35-207ENST00000530546 KDELR2P33947 212 aa11.01□□□□□ -0.65
USP35-207ENST00000530546 CRATP43155 626 aa11.01□□□□□ -0.65
USP35-207ENST00000530546 SLC15A1P46059 708 aa11.01□□□□□ -0.65
USP35-207ENST00000530546 CLCNKAP51800 687 aa11.01□□□□□ -0.65
USP35-207ENST00000530546 ZNF763Q0D2J5 394 aa11.01□□□□□ -0.65
USP35-207ENST00000530546 C2orf27AQ580R0 203 aa11.01□□□□□ -0.65
USP35-207ENST00000530546 AGBL4Q5VU57 503 aa11.01□□□□□ -0.65
USP35-207ENST00000530546 KBTBD8Q8NFY9 601 aa11.01□□□□□ -0.65
USP35-207ENST00000530546 OR5AK3PQ8NH89 298 aa11.01□□□□□ -0.65
USP35-207ENST00000530546 OR5K1Q8NHB7 308 aa11.01□□□□□ -0.65
USP35-207ENST00000530546 RAB7BQ96AH8 199 aa11.01□□□□□ -0.65
USP35-207ENST00000530546 COX14Q96I36 57 aa11.01□□□□□ -0.65
USP35-207ENST00000530546 TMEM121BQ9BXQ6 578 aaPredicted RBP11.01□□□□□ -0.65
USP35-207ENST00000530546 SAMD4AQ9UPU9 718 aaKnown RBP11.01□□□□□ -0.65
USP35-207ENST00000530546 SZT2Q5T011 3432 aa11.01□□□□□ -0.65
USP35-207ENST00000530546 NUMA1Q14980 2115 aa11.01□□□□□ -0.65
USP35-207ENST00000530546 MITFO75030 526 aaPredicted RBP11.01□□□□□ -0.65
USP35-207ENST00000530546 UGT2B17O75795 530 aa11.01□□□□□ -0.65
USP35-207ENST00000530546 FADS2O95864 444 aaKnown RBP11.01□□□□□ -0.65
USP35-207ENST00000530546 MT-ND2P03891 347 aa11.01□□□□□ -0.65
USP35-207ENST00000530546 GPX2P18283 190 aa11.01□□□□□ -0.65
USP35-207ENST00000530546 KELP23276 732 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms