RNA–Protein interactions for RNA: ENST00000529866.5

COPB1-207, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 2

Gene COPB1, Length 729 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-207ENST00000529866 NTNG2Q96CW9 530 aa9.59□□□□□ -0.87
COPB1-207ENST00000529866 SPACA9Q96E40 222 aaPredicted RBP9.59□□□□□ -0.87
COPB1-207ENST00000529866 LINGO1Q96FE5 620 aa9.59□□□□□ -0.87
COPB1-207ENST00000529866 PBKQ96KB5 322 aa9.59□□□□□ -0.87
COPB1-207ENST00000529866 RUNDC3BQ96NL0 473 aa9.59□□□□□ -0.87
COPB1-207ENST00000529866 OSBPL9Q96SU4 736 aa9.59□□□□□ -0.87
COPB1-207ENST00000529866 CCL19Q99731 98 aa9.59□□□□□ -0.87
COPB1-207ENST00000529866 FAM167BQ9BTA0 163 aa9.59□□□□□ -0.87
COPB1-207ENST00000529866 DOHHQ9BU89 302 aa9.59□□□□□ -0.87
COPB1-207ENST00000529866 RBM24Q9BX46 236 aaKnown RBP9.59□□□□□ -0.87
COPB1-207ENST00000529866 KCNF1Q9H3M0 494 aa9.59□□□□□ -0.87
COPB1-207ENST00000529866 KLHL31Q9H511 634 aa9.59□□□□□ -0.87
COPB1-207ENST00000529866 COPS7BQ9H9Q2 264 aaPredicted RBP9.59□□□□□ -0.87
COPB1-207ENST00000529866 XAB2Q9HCS7 855 aaKnown RBP9.59□□□□□ -0.87
COPB1-207ENST00000529866 IARS2Q9NSE4 1012 aaKnown RBP9.59□□□□□ -0.87
COPB1-207ENST00000529866 RYDENQ9NUL5 291 aaKnown RBP9.59□□□□□ -0.87
COPB1-207ENST00000529866 TRMT1Q9NXH9 659 aaKnown RBP9.59□□□□□ -0.87
COPB1-207ENST00000529866 VTI1BQ9UEU0 232 aa9.59□□□□□ -0.87
COPB1-207ENST00000529866 ADAM21Q9UKJ8 722 aa9.59□□□□□ -0.87
COPB1-207ENST00000529866 JRKLQ9Y4A0 524 aa9.59□□□□□ -0.87
COPB1-207ENST00000529866 CLDN16Q9Y5I7 305 aa9.59□□□□□ -0.87
COPB1-207ENST00000529866 KCNE2Q9Y6J6 123 aa9.59□□□□□ -0.87
COPB1-207ENST00000529866 MPDZO75970 2070 aa9.59□□□□□ -0.87
COPB1-207ENST00000529866 TRIM64A6NGJ6 449 aa9.58□□□□□ -0.88
COPB1-207ENST00000529866 TRIM64BA6NI03 449 aa9.58□□□□□ -0.88
COPB1-207ENST00000529866 LRRC3CA6NJW4 275 aa9.58□□□□□ -0.88
COPB1-207ENST00000529866 CD8B2A6NJW9 211 aa9.58□□□□□ -0.88
COPB1-207ENST00000529866 C4orf51C9J302 202 aa9.58□□□□□ -0.88
COPB1-207ENST00000529866 DYRK3O43781 588 aa9.58□□□□□ -0.88
COPB1-207ENST00000529866 CTNSO60931 367 aa9.58□□□□□ -0.88
COPB1-207ENST00000529866 ENO2P09104 434 aaPredicted RBP9.58□□□□□ -0.88
COPB1-207ENST00000529866 RFPL3SP0C7P2 107 aa9.58□□□□□ -0.88
COPB1-207ENST00000529866 RPL21P46778 160 aaKnown RBP9.58□□□□□ -0.88
COPB1-207ENST00000529866 HNRNPFP52597 415 aaKnown RBP9.58□□□□□ -0.88
COPB1-207ENST00000529866 CDKN2DP55273 166 aa9.58□□□□□ -0.88
COPB1-207ENST00000529866 CRYZQ08257 329 aaKnown RBP9.58□□□□□ -0.88
COPB1-207ENST00000529866 ASPHQ12797 758 aa9.58□□□□□ -0.88
COPB1-207ENST00000529866 CBLBQ13191 982 aa9.58□□□□□ -0.88
COPB1-207ENST00000529866 RUNX2Q13950 521 aa9.58□□□□□ -0.88
COPB1-207ENST00000529866 CRYMQ14894 314 aa9.58□□□□□ -0.88
COPB1-207ENST00000529866 ZNF791Q3KP31 576 aaPredicted RBP9.58□□□□□ -0.88
COPB1-207ENST00000529866 PIGGQ5H8A4 983 aa9.58□□□□□ -0.88
COPB1-207ENST00000529866 POMZP3Q6PJE2 187 aa9.58□□□□□ -0.88
COPB1-207ENST00000529866 NXPE4Q6UWF7 544 aa9.58□□□□□ -0.88
COPB1-207ENST00000529866 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP9.58□□□□□ -0.88
COPB1-207ENST00000529866 KLHDC8AQ8IYD2 350 aa9.58□□□□□ -0.88
COPB1-207ENST00000529866 C2CD4AQ8NCU7 369 aaPredicted RBP9.58□□□□□ -0.88
COPB1-207ENST00000529866 TMEM52Q8NDY8 209 aa9.58□□□□□ -0.88
COPB1-207ENST00000529866 CCT6BQ92526 530 aa9.58□□□□□ -0.88
COPB1-207ENST00000529866 PERPQ96FX8 193 aa9.58□□□□□ -0.88
COPB1-207ENST00000529866 ZNF597Q96LX8 424 aa9.58□□□□□ -0.88
COPB1-207ENST00000529866 TRIB1Q96RU8 372 aa9.58□□□□□ -0.88
COPB1-207ENST00000529866 ALOXE3Q9BYJ1 711 aa9.58□□□□□ -0.88
COPB1-207ENST00000529866 PRDM14Q9GZV8 571 aa9.58□□□□□ -0.88
COPB1-207ENST00000529866 DDX47Q9H0S4 455 aaKnown RBP9.58□□□□□ -0.88
COPB1-207ENST00000529866 EPB41L4BQ9H329 900 aa9.58□□□□□ -0.88
COPB1-207ENST00000529866 SH2D2AQ9NP31 389 aa9.58□□□□□ -0.88
COPB1-207ENST00000529866 CNIH4Q9P003 139 aa9.58□□□□□ -0.88
COPB1-207ENST00000529866 NDRG3Q9UGV2 375 aa9.58□□□□□ -0.88
COPB1-207ENST00000529866 IKZF3Q9UKT9 509 aa9.58□□□□□ -0.88
COPB1-207ENST00000529866 SNX12Q9UMY4 172 aa9.58□□□□□ -0.88
COPB1-207ENST00000529866 A0A0G2JN53 185 aa9.57□□□□□ -0.88
COPB1-207ENST00000529866 A0A1W2PPR1 153 aa9.57□□□□□ -0.88
COPB1-207ENST00000529866 CTAGE15A4D2H0 777 aa9.57□□□□□ -0.88
COPB1-207ENST00000529866 MBD3L4A6NDZ8 208 aaPredicted RBP9.57□□□□□ -0.88
COPB1-207ENST00000529866 MBD3L3A6NE82 208 aaPredicted RBP9.57□□□□□ -0.88
COPB1-207ENST00000529866 MBD3L5A6NJ08 208 aaPredicted RBP9.57□□□□□ -0.88
COPB1-207ENST00000529866 DNALI1O14645 258 aaPredicted RBP9.57□□□□□ -0.88
COPB1-207ENST00000529866 ZNF354AO60765 605 aaPredicted RBP9.57□□□□□ -0.88
COPB1-207ENST00000529866 CRLF1O75462 422 aa9.57□□□□□ -0.88
COPB1-207ENST00000529866 GUCA1CO95843 209 aa9.57□□□□□ -0.88
COPB1-207ENST00000529866 IVDP26440 423 aa9.57□□□□□ -0.88
COPB1-207ENST00000529866 SERPINB3P29508 390 aa9.57□□□□□ -0.88
COPB1-207ENST00000529866 FNTAP49354 379 aa9.57□□□□□ -0.88
COPB1-207ENST00000529866 AGFG1P52594 562 aaKnown RBP9.57□□□□□ -0.88
COPB1-207ENST00000529866 LIM2P55344 173 aa9.57□□□□□ -0.88
COPB1-207ENST00000529866 IL2P60568 153 aa9.57□□□□□ -0.88
COPB1-207ENST00000529866 RCAN2Q14206 197 aa9.57□□□□□ -0.88
COPB1-207ENST00000529866 TBCELQ5QJ74 424 aa9.57□□□□□ -0.88
COPB1-207ENST00000529866 HP1BP3Q5SSJ5 553 aaPredicted RBP9.57□□□□□ -0.88
COPB1-207ENST00000529866 TRIM40Q6P9F5 258 aa9.57□□□□□ -0.88
COPB1-207ENST00000529866 PAQR3Q6TCH7 311 aa9.57□□□□□ -0.88
COPB1-207ENST00000529866 CTAGE6Q86UF2 777 aa9.57□□□□□ -0.88
COPB1-207ENST00000529866 PPIL6Q8IXY8 311 aa9.57□□□□□ -0.88
COPB1-207ENST00000529866 SLC15A4Q8N697 577 aa9.57□□□□□ -0.88
COPB1-207ENST00000529866 ZNF321PQ8N8H1 164 aa9.57□□□□□ -0.88
COPB1-207ENST00000529866 FAM13CQ8NE31 585 aa9.57□□□□□ -0.88
COPB1-207ENST00000529866 MBD3L2Q8NHZ7 208 aaPredicted RBP9.57□□□□□ -0.88
COPB1-207ENST00000529866 ACTRT1Q8TDG2 376 aa9.57□□□□□ -0.88
COPB1-207ENST00000529866 MS4A6EQ96DS6 147 aa9.57□□□□□ -0.88
COPB1-207ENST00000529866 ART5Q96L15 291 aa9.57□□□□□ -0.88
COPB1-207ENST00000529866 ZFP3Q96NJ6 502 aa9.57□□□□□ -0.88
COPB1-207ENST00000529866 SERINC2Q96SA4 455 aa9.57□□□□□ -0.88
COPB1-207ENST00000529866 CSF3RQ99062 836 aa9.57□□□□□ -0.88
COPB1-207ENST00000529866 TIMP4Q99727 224 aa9.57□□□□□ -0.88
COPB1-207ENST00000529866 SFXN3Q9BWM7 321 aa9.57□□□□□ -0.88
COPB1-207ENST00000529866 GALNT8Q9NY28 637 aa9.57□□□□□ -0.88
COPB1-207ENST00000529866 JKAMPQ9P055 326 aa9.57□□□□□ -0.88
COPB1-207ENST00000529866 DAPP1Q9UN19 280 aa9.57□□□□□ -0.88
COPB1-207ENST00000529866 CAMK2AQ9UQM7 478 aa9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms