RNA–Protein interactions for RNA: ENST00000523387.5

CSMD1-212, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 2

Gene CSMD1, Length 3,989 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-212ENST00000523387 LRRC32Q14392 662 aa8.63□□□□□ -1.03
CSMD1-212ENST00000523387 SSX1Q16384 188 aa8.63□□□□□ -1.03
CSMD1-212ENST00000523387 FAM180BQ6P0A1 224 aa8.63□□□□□ -1.03
CSMD1-212ENST00000523387 C11orf88Q6PI97 169 aa8.63□□□□□ -1.03
CSMD1-212ENST00000523387 ZNF730Q6ZMV8 503 aa8.63□□□□□ -1.03
CSMD1-212ENST00000523387 IDO2Q6ZQW0 420 aa8.63□□□□□ -1.03
CSMD1-212ENST00000523387 CXXC5Q7LFL8 322 aaKnown RBP8.63□□□□□ -1.03
CSMD1-212ENST00000523387 NLRP8Q86W28 1048 aa8.63□□□□□ -1.03
CSMD1-212ENST00000523387 SYT14Q8NB59 555 aa8.63□□□□□ -1.03
CSMD1-212ENST00000523387 OR52N2Q8NGI0 321 aa8.63□□□□□ -1.03
CSMD1-212ENST00000523387 AP2M1Q96CW1 435 aa8.63□□□□□ -1.03
CSMD1-212ENST00000523387 MRPL9Q9BYD2 267 aaKnown RBP8.63□□□□□ -1.03
CSMD1-212ENST00000523387 KCNN2Q9H2S1 579 aa8.63□□□□□ -1.03
CSMD1-212ENST00000523387 REEP4Q9H6H4 257 aa8.63□□□□□ -1.03
CSMD1-212ENST00000523387 NARFLQ9H6Q4 476 aa8.63□□□□□ -1.03
CSMD1-212ENST00000523387 HHATLQ9HCP6 504 aa8.63□□□□□ -1.03
CSMD1-212ENST00000523387 SNX11Q9Y5W9 270 aa8.63□□□□□ -1.03
CSMD1-212ENST00000523387 CFAP20Q9Y6A4 193 aaKnown RBP8.63□□□□□ -1.03
CSMD1-212ENST00000523387 IQCMA0A1B0GVH7 501 aa8.63□□□□□ -1.03
CSMD1-212ENST00000523387 C2orf92A0A1B0GVN3 265 aa8.63□□□□□ -1.03
CSMD1-212ENST00000523387 SLC22A5O76082 557 aa8.63□□□□□ -1.03
CSMD1-212ENST00000523387 TIA1P31483 386 aaKnown RBP eCLIP8.63□□□□□ -1.03
CSMD1-212ENST00000523387 CSKP41240 450 aa8.63□□□□□ -1.03
CSMD1-212ENST00000523387 CDH11P55287 796 aa8.63□□□□□ -1.03
CSMD1-212ENST00000523387 ZNF763Q0D2J5 394 aa8.63□□□□□ -1.03
CSMD1-212ENST00000523387 FCN2Q15485 313 aa8.63□□□□□ -1.03
CSMD1-212ENST00000523387 DEFB132Q7Z7B7 95 aa8.63□□□□□ -1.03
CSMD1-212ENST00000523387 ZNF467Q7Z7K2 595 aaPredicted RBP8.63□□□□□ -1.03
CSMD1-212ENST00000523387 IQCHQ86VS3 1027 aa8.63□□□□□ -1.03
CSMD1-212ENST00000523387 GRAMD2AQ8IUY3 354 aa8.63□□□□□ -1.03
CSMD1-212ENST00000523387 KLHL36Q8N4N3 616 aa8.63□□□□□ -1.03
CSMD1-212ENST00000523387 C2orf73Q8N5S3 287 aaPredicted RBP8.63□□□□□ -1.03
CSMD1-212ENST00000523387 MEIOBQ8N635 442 aa8.63□□□□□ -1.03
CSMD1-212ENST00000523387 CLDN22Q8N7P3 220 aa8.63□□□□□ -1.03
CSMD1-212ENST00000523387 EXOSC8Q96B26 276 aaKnown RBP8.63□□□□□ -1.03
CSMD1-212ENST00000523387 TBC1D20Q96BZ9 403 aa8.63□□□□□ -1.03
CSMD1-212ENST00000523387 C12orf66Q96MD2 445 aa8.63□□□□□ -1.03
CSMD1-212ENST00000523387 BTBD2Q9BX70 525 aa8.63□□□□□ -1.03
CSMD1-212ENST00000523387 GPR52Q9Y2T5 361 aa8.63□□□□□ -1.03
CSMD1-212ENST00000523387 YARS2Q9Y2Z4 477 aaKnown RBP8.63□□□□□ -1.03
CSMD1-212ENST00000523387 MCM3APO60318 1980 aa8.62□□□□□ -1.03
CSMD1-212ENST00000523387 ANKRD31Q8N7Z5 1873 aa8.62□□□□□ -1.03
CSMD1-212ENST00000523387 LTBP1Q14766 1721 aa8.62□□□□□ -1.03
CSMD1-212ENST00000523387 TRBV5-3A0A0A0MS03 114 aa8.62□□□□□ -1.03
CSMD1-212ENST00000523387 A0A0U1RQF3 1178 aa8.62□□□□□ -1.03
CSMD1-212ENST00000523387 K7ERQ8 282 aa8.62□□□□□ -1.03
CSMD1-212ENST00000523387 NUPL2O15504 423 aaKnown RBP8.62□□□□□ -1.03
CSMD1-212ENST00000523387 NCR1O76036 304 aa8.62□□□□□ -1.03
CSMD1-212ENST00000523387 BPIP17213 487 aa8.62□□□□□ -1.03
CSMD1-212ENST00000523387 ALAS2P22557 587 aa8.62□□□□□ -1.03
CSMD1-212ENST00000523387 HNF1BP35680 557 aa8.62□□□□□ -1.03
CSMD1-212ENST00000523387 ANXA11P50995 505 aaKnown RBP8.62□□□□□ -1.03
CSMD1-212ENST00000523387 TSPAN5P62079 268 aa8.62□□□□□ -1.03
CSMD1-212ENST00000523387 SNRPD1P62314 119 aaKnown RBP8.62□□□□□ -1.03
CSMD1-212ENST00000523387 RPS25P62851 125 aaKnown RBP8.62□□□□□ -1.03
CSMD1-212ENST00000523387 TAGLNQ01995 201 aaKnown RBP8.62□□□□□ -1.03
CSMD1-212ENST00000523387 LGALS3BPQ08380 585 aa8.62□□□□□ -1.03
CSMD1-212ENST00000523387 SLBPQ14493 270 aaKnown RBP eCLIP8.62□□□□□ -1.03
CSMD1-212ENST00000523387 COX20Q5RI15 118 aa8.62□□□□□ -1.03
CSMD1-212ENST00000523387 ADGRF1Q5T601 910 aa8.62□□□□□ -1.03
CSMD1-212ENST00000523387 AGTRAPQ6RW13 159 aa8.62□□□□□ -1.03
CSMD1-212ENST00000523387 TCTE3Q8IZS6 198 aa8.62□□□□□ -1.03
CSMD1-212ENST00000523387 SYNPOQ8N3V7 929 aa8.62□□□□□ -1.03
CSMD1-212ENST00000523387 SRFBP1Q8NEF9 429 aaKnown RBP8.62□□□□□ -1.03
CSMD1-212ENST00000523387 SLC25A46Q96AG3 418 aa8.62□□□□□ -1.03
CSMD1-212ENST00000523387 RAD9AQ99638 391 aa8.62□□□□□ -1.03
CSMD1-212ENST00000523387 P2RY12Q9H244 342 aa8.62□□□□□ -1.03
CSMD1-212ENST00000523387 SLC28A3Q9HAS3 691 aa8.62□□□□□ -1.03
CSMD1-212ENST00000523387 KLHL28Q9NXS3 571 aa8.62□□□□□ -1.03
CSMD1-212ENST00000523387 BTNL2Q9UIR0 455 aa8.62□□□□□ -1.03
CSMD1-212ENST00000523387 RWDD3Q9Y3V2 267 aa8.62□□□□□ -1.03
CSMD1-212ENST00000523387 TTC3P53804 2025 aa8.62□□□□□ -1.03
CSMD1-212ENST00000523387 IGLV3-10A0A075B6K4 115 aa8.62□□□□□ -1.03
CSMD1-212ENST00000523387 SLC38A8A6NNN8 435 aa8.62□□□□□ -1.03
CSMD1-212ENST00000523387 CHURC1-FNTBB4DL54 471 aa8.62□□□□□ -1.03
CSMD1-212ENST00000523387 E7EQ34 232 aa8.62□□□□□ -1.03
CSMD1-212ENST00000523387 M0QZQ0 153 aa8.62□□□□□ -1.03
CSMD1-212ENST00000523387 FAAHO00519 579 aa8.62□□□□□ -1.03
CSMD1-212ENST00000523387 GJB5O95377 273 aa8.62□□□□□ -1.03
CSMD1-212ENST00000523387 SRPRAP08240 638 aaKnown RBP8.62□□□□□ -1.03
CSMD1-212ENST00000523387 CLTBP09497 229 aa8.62□□□□□ -1.03
CSMD1-212ENST00000523387 ATF6P18850 670 aa8.62□□□□□ -1.03
CSMD1-212ENST00000523387 POLR2CP19387 275 aaPredicted RBP8.62□□□□□ -1.03
CSMD1-212ENST00000523387 DDCP20711 480 aa8.62□□□□□ -1.03
CSMD1-212ENST00000523387 NUDT1P36639 197 aa8.62□□□□□ -1.03
CSMD1-212ENST00000523387 GAB1Q13480 694 aa8.62□□□□□ -1.03
CSMD1-212ENST00000523387 RPS26P11Q5JNZ5 115 aaPredicted RBP8.62□□□□□ -1.03
CSMD1-212ENST00000523387 LIPJQ5W064 366 aa8.62□□□□□ -1.03
CSMD1-212ENST00000523387 NCEH1Q6PIU2 408 aa8.62□□□□□ -1.03
CSMD1-212ENST00000523387 HMGN2P46Q86SG4 172 aa8.62□□□□□ -1.03
CSMD1-212ENST00000523387 ZNF280BQ86YH2 543 aa8.62□□□□□ -1.03
CSMD1-212ENST00000523387 SLC16A10Q8TF71 515 aa8.62□□□□□ -1.03
CSMD1-212ENST00000523387 RFKQ969G6 155 aa8.62□□□□□ -1.03
CSMD1-212ENST00000523387 BBS4Q96RK4 519 aa8.62□□□□□ -1.03
CSMD1-212ENST00000523387 CLSTN3Q9BQT9 956 aa8.62□□□□□ -1.03
CSMD1-212ENST00000523387 NXF2Q9GZY0 626 aaKnown RBP8.62□□□□□ -1.03
CSMD1-212ENST00000523387 PIGUQ9H490 435 aa8.62□□□□□ -1.03
CSMD1-212ENST00000523387 RDH14Q9HBH5 336 aa8.62□□□□□ -1.03
CSMD1-212ENST00000523387 HCN3Q9P1Z3 774 aa8.62□□□□□ -1.03
CSMD1-212ENST00000523387 TRBV4-1A0A0J9YWV2 114 aa8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms