RNA–Protein interactions for RNA: ENST00000520880.1

CTHRC1-204, Transcript of collagen triple helix repeat containing 1, humanhuman

TSL 4 BASIC

Gene CTHRC1, Length 560 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1-204ENST00000520880 PTK6Q13882 451 aa3.5□□□□□ -1.85
CTHRC1-204ENST00000520880 PIGHQ14442 188 aaPredicted RBP3.5□□□□□ -1.85
CTHRC1-204ENST00000520880 GOLGA7BQ2TAP0 167 aa3.5□□□□□ -1.85
CTHRC1-204ENST00000520880 HSP90B2PQ58FF3 399 aa3.5□□□□□ -1.85
CTHRC1-204ENST00000520880 TTMPQ5BVD1 217 aa3.5□□□□□ -1.85
CTHRC1-204ENST00000520880 CFAP58Q5T655 872 aa3.5□□□□□ -1.85
CTHRC1-204ENST00000520880 INTS11Q5TA45 600 aaKnown RBP3.5□□□□□ -1.85
CTHRC1-204ENST00000520880 GKAP1Q5VSY0 366 aaPredicted RBP3.5□□□□□ -1.85
CTHRC1-204ENST00000520880 LRRC38Q5VT99 294 aa3.5□□□□□ -1.85
CTHRC1-204ENST00000520880 MFSD14CQ5VZR4 134 aa3.5□□□□□ -1.85
CTHRC1-204ENST00000520880 DCUN1D2Q6PH85 259 aa3.5□□□□□ -1.85
CTHRC1-204ENST00000520880 LCLAT1Q6UWP7 414 aa3.5□□□□□ -1.85
CTHRC1-204ENST00000520880 CXCL17Q6UXB2 119 aa3.5□□□□□ -1.85
CTHRC1-204ENST00000520880 MFSD7Q6UXD7 560 aa3.5□□□□□ -1.85
CTHRC1-204ENST00000520880 FAM183BPQ6ZVS7 135 aa3.5□□□□□ -1.85
CTHRC1-204ENST00000520880 CYP4V2Q6ZWL3 525 aaPredicted RBP3.5□□□□□ -1.85
CTHRC1-204ENST00000520880 SERINC5Q86VE9 423 aa3.5□□□□□ -1.85
CTHRC1-204ENST00000520880 CCDC50Q8IVM0 306 aa3.5□□□□□ -1.85
CTHRC1-204ENST00000520880 NME8Q8N427 588 aa3.5□□□□□ -1.85
CTHRC1-204ENST00000520880 TTC39CQ8N584 583 aa3.5□□□□□ -1.85
CTHRC1-204ENST00000520880 CPSF7Q8N684 471 aaKnown RBP3.5□□□□□ -1.85
CTHRC1-204ENST00000520880 C12orf29Q8N999 325 aa3.5□□□□□ -1.85
CTHRC1-204ENST00000520880 EXD1Q8NHP7 514 aa3.5□□□□□ -1.85
CTHRC1-204ENST00000520880 UBA3Q8TBC4 463 aa3.5□□□□□ -1.85
CTHRC1-204ENST00000520880 FBXO25Q8TCJ0 367 aa3.5□□□□□ -1.85
CTHRC1-204ENST00000520880 MAIP1Q8WWC4 291 aa3.5□□□□□ -1.85
CTHRC1-204ENST00000520880 C1orf54Q8WWF1 131 aa3.5□□□□□ -1.85
CTHRC1-204ENST00000520880 ART4Q93070 314 aa3.5□□□□□ -1.85
CTHRC1-204ENST00000520880 LRRC45Q96CN5 670 aa3.5□□□□□ -1.85
CTHRC1-204ENST00000520880 RBM41Q96IZ5 413 aaKnown RBP3.5□□□□□ -1.85
CTHRC1-204ENST00000520880 PIWIL1Q96J94 861 aaKnown RBP3.5□□□□□ -1.85
CTHRC1-204ENST00000520880 SGK494Q96LW2 274 aa3.5□□□□□ -1.85
CTHRC1-204ENST00000520880 ZNF560Q96MR9 790 aa3.5□□□□□ -1.85
CTHRC1-204ENST00000520880 PEBP4Q96S96 227 aa3.5□□□□□ -1.85
CTHRC1-204ENST00000520880 TSPAN18Q96SJ8 248 aa3.5□□□□□ -1.85
CTHRC1-204ENST00000520880 RUFY1Q96T51 708 aa3.5□□□□□ -1.85
CTHRC1-204ENST00000520880 FMO2Q99518 471 aa3.5□□□□□ -1.85
CTHRC1-204ENST00000520880 MTG1Q9BT17 334 aaPredicted RBP3.5□□□□□ -1.85
CTHRC1-204ENST00000520880 APOL6Q9BWW8 343 aa3.5□□□□□ -1.85
CTHRC1-204ENST00000520880 OSBPL8Q9BZF1 889 aa3.5□□□□□ -1.85
CTHRC1-204ENST00000520880 TRIM6Q9C030 488 aaPredicted RBP3.5□□□□□ -1.85
CTHRC1-204ENST00000520880 DPEP3Q9H4B8 488 aa3.5□□□□□ -1.85
CTHRC1-204ENST00000520880 PSD3Q9NYI0 1048 aa3.5□□□□□ -1.85
CTHRC1-204ENST00000520880 WDR35Q9P2L0 1181 aa3.5□□□□□ -1.85
CTHRC1-204ENST00000520880 TSPAN16Q9UKR8 245 aa3.5□□□□□ -1.85
CTHRC1-204ENST00000520880 KIAA1257Q9ULG3 409 aa3.5□□□□□ -1.85
CTHRC1-204ENST00000520880 UBQLN1Q9UMX0 589 aaKnown RBP3.5□□□□□ -1.85
CTHRC1-204ENST00000520880 SNX24Q9Y343 169 aa3.5□□□□□ -1.85
CTHRC1-204ENST00000520880 TRPV2Q9Y5S1 764 aa3.5□□□□□ -1.85
CTHRC1-204ENST00000520880 GREB1Q4ZG55 1949 aa3.5□□□□□ -1.85
CTHRC1-204ENST00000520880 MICAL3Q7RTP6 2002 aa3.49□□□□□ -1.85
CTHRC1-204ENST00000520880 GRIN2DO15399 1336 aa3.49□□□□□ -1.85
CTHRC1-204ENST00000520880 SHROOM3Q8TF72 1996 aa3.49□□□□□ -1.85
CTHRC1-204ENST00000520880 LOC101059948A0A1B0GTJ6 334 aa3.49□□□□□ -1.85
CTHRC1-204ENST00000520880 PRSS51A0A1B0GVH4 220 aa3.49□□□□□ -1.85
CTHRC1-204ENST00000520880 A0A1W2PNU3 283 aaPredicted RBP3.49□□□□□ -1.85
CTHRC1-204ENST00000520880 MED19A0JLT2 244 aaPredicted RBP3.49□□□□□ -1.85
CTHRC1-204ENST00000520880 MEX3AA1L020 520 aaKnown RBP3.49□□□□□ -1.85
CTHRC1-204ENST00000520880 ELOVL7A1L3X0 281 aa3.49□□□□□ -1.85
CTHRC1-204ENST00000520880 MSGN1A6NI15 193 aa3.49□□□□□ -1.85
CTHRC1-204ENST00000520880 KPNA7A9QM74 516 aa3.49□□□□□ -1.85
CTHRC1-204ENST00000520880 E9PI62 339 aa3.49□□□□□ -1.85
CTHRC1-204ENST00000520880 M0QZ92 97 aa3.49□□□□□ -1.85
CTHRC1-204ENST00000520880 PTGESO14684 152 aa3.49□□□□□ -1.85
CTHRC1-204ENST00000520880 NDUFS4O43181 175 aa3.49□□□□□ -1.85
CTHRC1-204ENST00000520880 CCNDBP1O95273 360 aa3.49□□□□□ -1.85
CTHRC1-204ENST00000520880 AGR2O95994 175 aa3.49□□□□□ -1.85
CTHRC1-204ENST00000520880 CD4P01730 458 aa3.49□□□□□ -1.85
CTHRC1-204ENST00000520880 CHRNA1P02708 482 aa3.49□□□□□ -1.85
CTHRC1-204ENST00000520880 ASGR1P07306 291 aa3.49□□□□□ -1.85
CTHRC1-204ENST00000520880 ZSCAN5DPP0CG00 497 aa3.49□□□□□ -1.85
CTHRC1-204ENST00000520880 KRT3P12035 628 aa3.49□□□□□ -1.85
CTHRC1-204ENST00000520880 WARSP23381 471 aaKnown RBP3.49□□□□□ -1.85
CTHRC1-204ENST00000520880 PSMA2P25787 234 aa3.49□□□□□ -1.85
CTHRC1-204ENST00000520880 IVDP26440 423 aa3.49□□□□□ -1.85
CTHRC1-204ENST00000520880 NMBRP28336 390 aa3.49□□□□□ -1.85
CTHRC1-204ENST00000520880 CCND3P30281 292 aaPredicted RBP3.49□□□□□ -1.85
CTHRC1-204ENST00000520880 HNF4AP41235 474 aa3.49□□□□□ -1.85
CTHRC1-204ENST00000520880 CDKN2BP42772 138 aa3.49□□□□□ -1.85
CTHRC1-204ENST00000520880 RGS7P49802 495 aa3.49□□□□□ -1.85
CTHRC1-204ENST00000520880 PLTPP55058 493 aa3.49□□□□□ -1.85
CTHRC1-204ENST00000520880 PLA2G7Q13093 441 aa3.49□□□□□ -1.85
CTHRC1-204ENST00000520880 PPP1R7Q15435 360 aa3.49□□□□□ -1.85
CTHRC1-204ENST00000520880 TAZQ16635 292 aa3.49□□□□□ -1.85
CTHRC1-204ENST00000520880 TFDP3Q5H9I0 405 aa3.49□□□□□ -1.85
CTHRC1-204ENST00000520880 SPDYCQ5MJ68 293 aa3.49□□□□□ -1.85
CTHRC1-204ENST00000520880 BSPRYQ5W0U4 402 aa3.49□□□□□ -1.85
CTHRC1-204ENST00000520880 TWF2Q6IBS0 349 aaKnown RBP3.49□□□□□ -1.85
CTHRC1-204ENST00000520880 OR6B2Q6IFH4 312 aa3.49□□□□□ -1.85
CTHRC1-204ENST00000520880 PMF1Q6P1K2 205 aa3.49□□□□□ -1.85
CTHRC1-204ENST00000520880 CPLX4Q7Z7G2 160 aa3.49□□□□□ -1.85
CTHRC1-204ENST00000520880 ACOT1Q86TX2 421 aa3.49□□□□□ -1.85
CTHRC1-204ENST00000520880 RPAINQ86UA6 219 aa3.49□□□□□ -1.85
CTHRC1-204ENST00000520880 LRRTM1Q86UE6 522 aa3.49□□□□□ -1.85
CTHRC1-204ENST00000520880 UNC93AQ86WB7 457 aa3.49□□□□□ -1.85
CTHRC1-204ENST00000520880 RCOR2Q8IZ40 523 aa3.49□□□□□ -1.85
CTHRC1-204ENST00000520880 LSMEM2Q8N112 164 aa3.49□□□□□ -1.85
CTHRC1-204ENST00000520880 RAB42Q8N4Z0 105 aa3.49□□□□□ -1.85
CTHRC1-204ENST00000520880 NAXEQ8NCW5 288 aa3.49□□□□□ -1.85
CTHRC1-204ENST00000520880 GRK7Q8WTQ7 553 aa3.49□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 68 ms