RNA–Protein interactions for RNA: ENST00000518385.5

SDC2-202, Transcript of syndecan 2, humanhuman

TSL 5 BASIC

Gene SDC2, Length 1,583 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-202ENST00000518385 ANXA8L1Q5VT79 327 aa17.45■□□□□ 0.38
SDC2-202ENST00000518385 AGAP6Q5VW22 663 aa17.45■□□□□ 0.38
SDC2-202ENST00000518385 ACSM2BQ68CK6 577 aa17.45■□□□□ 0.38
SDC2-202ENST00000518385 ZCCHC8Q6NZY4 707 aaKnown RBP17.45■□□□□ 0.38
SDC2-202ENST00000518385 FAM83HQ6ZRV2 1179 aaPredicted RBP17.45■□□□□ 0.38
SDC2-202ENST00000518385 Q6ZS52 159 aa17.45■□□□□ 0.38
SDC2-202ENST00000518385 FAM92BQ6ZTR7 304 aa17.45■□□□□ 0.38
SDC2-202ENST00000518385 C1orf52Q8N6N3 182 aaKnown RBP17.45■□□□□ 0.38
SDC2-202ENST00000518385 VPS37AQ8NEZ2 397 aa17.45■□□□□ 0.38
SDC2-202ENST00000518385 APH1BQ8WW43 257 aa17.45■□□□□ 0.38
SDC2-202ENST00000518385 RASSF5Q8WWW0 418 aa17.45■□□□□ 0.38
SDC2-202ENST00000518385 TFGQ92734 400 aaPredicted RBP17.45■□□□□ 0.38
SDC2-202ENST00000518385 FOXJ1Q92949 421 aa17.45■□□□□ 0.38
SDC2-202ENST00000518385 NEIL2Q969S2 332 aa17.45■□□□□ 0.38
SDC2-202ENST00000518385 C11orf24Q96F05 449 aaPredicted RBP17.45■□□□□ 0.38
SDC2-202ENST00000518385 APOLD1Q96LR9 279 aa17.45■□□□□ 0.38
SDC2-202ENST00000518385 AGAP4Q96P64 663 aa17.45■□□□□ 0.38
SDC2-202ENST00000518385 NELL2Q99435 816 aa17.45■□□□□ 0.38
SDC2-202ENST00000518385 SLC17A9Q9BYT1 436 aa17.45■□□□□ 0.38
SDC2-202ENST00000518385 SACM1LQ9NTJ5 587 aa17.45■□□□□ 0.38
SDC2-202ENST00000518385 EXD2Q9NVH0 621 aa17.45■□□□□ 0.38
SDC2-202ENST00000518385 FBXL21Q9UKT6 434 aa17.45■□□□□ 0.38
SDC2-202ENST00000518385 ZFR2Q9UPR6 939 aaKnown RBP17.45■□□□□ 0.38
SDC2-202ENST00000518385 NCKAP1Q9Y2A7 1128 aa17.45■□□□□ 0.38
SDC2-202ENST00000518385 PCDHB11Q9Y5F2 797 aa17.45■□□□□ 0.38
SDC2-202ENST00000518385 PCDHGA6Q9Y5G7 932 aa17.45■□□□□ 0.38
SDC2-202ENST00000518385 TCRBV21S2A2A0A5A6 115 aa17.44■□□□□ 0.38
SDC2-202ENST00000518385 PCDHGA12O60330 932 aa17.44■□□□□ 0.38
SDC2-202ENST00000518385 MAN1A2O60476 641 aa17.44■□□□□ 0.38
SDC2-202ENST00000518385 HOXC4P09017 264 aaPredicted RBP17.44■□□□□ 0.38
SDC2-202ENST00000518385 ACADMP11310 421 aa17.44■□□□□ 0.38
SDC2-202ENST00000518385 NDUFV2P19404 249 aa17.44■□□□□ 0.38
SDC2-202ENST00000518385 PIK3CBP42338 1070 aa17.44■□□□□ 0.38
SDC2-202ENST00000518385 CD300CQ08708 224 aa17.44■□□□□ 0.38
SDC2-202ENST00000518385 CLPPQ16740 277 aaPredicted RBP17.44■□□□□ 0.38
SDC2-202ENST00000518385 LAIR1Q6GTX8 287 aa17.44■□□□□ 0.38
SDC2-202ENST00000518385 NXPE4Q6UWF7 544 aa17.44■□□□□ 0.38
SDC2-202ENST00000518385 CAMKMTQ7Z624 323 aa17.44■□□□□ 0.38
SDC2-202ENST00000518385 TRIM69Q86WT6 500 aa17.44■□□□□ 0.38
SDC2-202ENST00000518385 RAB42Q8N4Z0 105 aa17.44■□□□□ 0.38
SDC2-202ENST00000518385 OR5K2Q8NHB8 316 aa17.44■□□□□ 0.38
SDC2-202ENST00000518385 OR14C36Q8NHC7 312 aa17.44■□□□□ 0.38
SDC2-202ENST00000518385 SLC5A11Q8WWX8 675 aa17.44■□□□□ 0.38
SDC2-202ENST00000518385 CXorf40BQ96DE9 158 aa17.44■□□□□ 0.38
SDC2-202ENST00000518385 TRPM6Q9BX84 2022 aa17.44■□□□□ 0.38
SDC2-202ENST00000518385 KRT87PA6NCN2 255 aa17.43■□□□□ 0.38
SDC2-202ENST00000518385 ARRDC5A6NEK1 342 aa17.43■□□□□ 0.38
SDC2-202ENST00000518385 M0R082 166 aa17.43■□□□□ 0.38
SDC2-202ENST00000518385 TBX1O43435 398 aa17.43■□□□□ 0.38
SDC2-202ENST00000518385 SUV39H1O43463 412 aa17.43■□□□□ 0.38
SDC2-202ENST00000518385 LCKP06239 509 aa17.43■□□□□ 0.38
SDC2-202ENST00000518385 CYP4B1P13584 511 aa17.43■□□□□ 0.38
SDC2-202ENST00000518385 ENGP17813 658 aa17.43■□□□□ 0.38
SDC2-202ENST00000518385 GABRG2P18507 467 aa17.43■□□□□ 0.38
SDC2-202ENST00000518385 ALDH4A1P30038 563 aa17.43■□□□□ 0.38
SDC2-202ENST00000518385 LIPAP38571 399 aa17.43■□□□□ 0.38
SDC2-202ENST00000518385 DGKEP52429 567 aa17.43■□□□□ 0.38
SDC2-202ENST00000518385 ADPRHP54922 357 aa17.43■□□□□ 0.38
SDC2-202ENST00000518385 IL1RL1Q01638 556 aa17.43■□□□□ 0.38
SDC2-202ENST00000518385 RBBP4Q09028 425 aa17.43■□□□□ 0.38
SDC2-202ENST00000518385 MAPK11Q15759 364 aa17.43■□□□□ 0.38
SDC2-202ENST00000518385 COLEC12Q5KU26 742 aa17.43■□□□□ 0.38
SDC2-202ENST00000518385 C19orf48Q6RUI8 117 aa17.43■□□□□ 0.38
SDC2-202ENST00000518385 SYT13Q7L8C5 426 aa17.43■□□□□ 0.38
SDC2-202ENST00000518385 ZNF605Q86T29 641 aa17.43■□□□□ 0.38
SDC2-202ENST00000518385 SYT12Q8IV01 421 aa17.43■□□□□ 0.38
SDC2-202ENST00000518385 SLC30A8Q8IWU4 369 aa17.43■□□□□ 0.38
SDC2-202ENST00000518385 UBALD2Q8IYN6 164 aa17.43■□□□□ 0.38
SDC2-202ENST00000518385 PARP16Q8N5Y8 322 aa17.43■□□□□ 0.38
SDC2-202ENST00000518385 ZNF675Q8TD23 568 aa17.43■□□□□ 0.38
SDC2-202ENST00000518385 C7orf34Q96L11 122 aa17.43■□□□□ 0.38
SDC2-202ENST00000518385 PANX1Q96RD7 426 aa17.43■□□□□ 0.38
SDC2-202ENST00000518385 INPP5KQ9BT40 448 aa17.43■□□□□ 0.38
SDC2-202ENST00000518385 CDADC1Q9BWV3 514 aa17.43■□□□□ 0.38
SDC2-202ENST00000518385 LGR4Q9BXB1 951 aa17.43■□□□□ 0.38
SDC2-202ENST00000518385 CDCA4Q9BXL8 241 aa17.43■□□□□ 0.38
SDC2-202ENST00000518385 ALOXE3Q9BYJ1 711 aa17.43■□□□□ 0.38
SDC2-202ENST00000518385 PITHD1Q9GZP4 211 aaPredicted RBP17.43■□□□□ 0.38
SDC2-202ENST00000518385 SYNDIG1Q9H7V2 258 aa17.43■□□□□ 0.38
SDC2-202ENST00000518385 POLMQ9NP87 494 aaPredicted RBP17.43■□□□□ 0.38
SDC2-202ENST00000518385 MBNL1Q9NR56 388 aaKnown RBP17.43■□□□□ 0.38
SDC2-202ENST00000518385 PCDHGB6Q9Y5F9 930 aa17.43■□□□□ 0.38
SDC2-202ENST00000518385 FAM170BA6NMN3 283 aa17.42■□□□□ 0.38
SDC2-202ENST00000518385 AXIN1O15169 862 aa17.42■□□□□ 0.38
SDC2-202ENST00000518385 ZW10O43264 779 aa17.42■□□□□ 0.38
SDC2-202ENST00000518385 RNGTTO60942 597 aaKnown RBP17.42■□□□□ 0.38
SDC2-202ENST00000518385 UGT2B17O75795 530 aa17.42■□□□□ 0.38
SDC2-202ENST00000518385 PAK4O96013 591 aaPredicted RBP17.42■□□□□ 0.38
SDC2-202ENST00000518385 PIPP12273 146 aaPredicted RBP17.42■□□□□ 0.38
SDC2-202ENST00000518385 GADD45AP24522 165 aa17.42■□□□□ 0.38
SDC2-202ENST00000518385 CXCR2P25025 360 aa17.42■□□□□ 0.38
SDC2-202ENST00000518385 VLDLRP98155 873 aa17.42■□□□□ 0.38
SDC2-202ENST00000518385 UBXN2BQ14CS0 331 aa17.42■□□□□ 0.38
SDC2-202ENST00000518385 KIAA1324Q6UXG2 1013 aaKnown RBP17.42■□□□□ 0.38
SDC2-202ENST00000518385 TMPRSS11BQ86T26 416 aa17.42■□□□□ 0.38
SDC2-202ENST00000518385 CCDC190Q86UF4 302 aa17.42■□□□□ 0.38
SDC2-202ENST00000518385 PTOV1Q86YD1 416 aa17.42■□□□□ 0.38
SDC2-202ENST00000518385 KRT78Q8N1N4 520 aa17.42■□□□□ 0.38
SDC2-202ENST00000518385 HUS1BQ8NHY5 278 aa17.42■□□□□ 0.38
SDC2-202ENST00000518385 TSSK3Q96PN8 268 aa17.42■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms