RNA–Protein interactions for RNA: ENST00000517239.1

RNU4-60P-201, Transcript of RNA, U4 small nuclear 60, pseudogene, humanhuman

BASIC

Gene RNU4-60P, Length 135 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-60P-201ENST00000517239 NDNFQ8TB73 568 aa3.65□□□□□ -1.83
RNU4-60P-201ENST00000517239 ACMSDQ8TDX5 336 aa3.65□□□□□ -1.83
RNU4-60P-201ENST00000517239 RNF128Q8TEB7 428 aa3.65□□□□□ -1.83
RNU4-60P-201ENST00000517239 GPX8Q8TED1 209 aa3.65□□□□□ -1.83
RNU4-60P-201ENST00000517239 CCDC107Q8WV48 283 aa3.65□□□□□ -1.83
RNU4-60P-201ENST00000517239 SCFD1Q8WVM8 642 aa3.65□□□□□ -1.83
RNU4-60P-201ENST00000517239 ASB5Q8WWX0 329 aa3.65□□□□□ -1.83
RNU4-60P-201ENST00000517239 TMEM37Q8WXS4 190 aa3.65□□□□□ -1.83
RNU4-60P-201ENST00000517239 ST8SIA1Q92185 356 aa3.65□□□□□ -1.83
RNU4-60P-201ENST00000517239 SUSD6Q92537 303 aa3.65□□□□□ -1.83
RNU4-60P-201ENST00000517239 MAP4K1Q92918 833 aa3.65□□□□□ -1.83
RNU4-60P-201ENST00000517239 ZNF479Q96JC4 524 aa3.65□□□□□ -1.83
RNU4-60P-201ENST00000517239 APOLD1Q96LR9 279 aa3.65□□□□□ -1.83
RNU4-60P-201ENST00000517239 Q96MF0 132 aa3.65□□□□□ -1.83
RNU4-60P-201ENST00000517239 TGM7Q96PF1 710 aa3.65□□□□□ -1.83
RNU4-60P-201ENST00000517239 DUX5Q96PT3 197 aa3.65□□□□□ -1.83
RNU4-60P-201ENST00000517239 TRNT1Q96Q11 434 aaKnown RBP3.65□□□□□ -1.83
RNU4-60P-201ENST00000517239 SIGLEC11Q96RL6 698 aa3.65□□□□□ -1.83
RNU4-60P-201ENST00000517239 CCDC3Q9BQI4 270 aa3.65□□□□□ -1.83
RNU4-60P-201ENST00000517239 NDUFAF3Q9BU61 184 aa3.65□□□□□ -1.83
RNU4-60P-201ENST00000517239 TSSK1BQ9BXA7 367 aa3.65□□□□□ -1.83
RNU4-60P-201ENST00000517239 FRMD8P1Q9BZ68 369 aaPredicted RBP3.65□□□□□ -1.83
RNU4-60P-201ENST00000517239 NSRP1Q9H0G5 558 aaKnown RBP3.65□□□□□ -1.83
RNU4-60P-201ENST00000517239 POLR3FQ9H1D9 316 aaPredicted RBP3.65□□□□□ -1.83
RNU4-60P-201ENST00000517239 MTIF3Q9H2K0 278 aaKnown RBP3.65□□□□□ -1.83
RNU4-60P-201ENST00000517239 C5orf66Q9H5L9 145 aa3.65□□□□□ -1.83
RNU4-60P-201ENST00000517239 KAT8Q9H7Z6 458 aaKnown RBP3.65□□□□□ -1.83
RNU4-60P-201ENST00000517239 RNF121Q9H920 327 aa3.65□□□□□ -1.83
RNU4-60P-201ENST00000517239 MCCC2Q9HCC0 563 aa3.65□□□□□ -1.83
RNU4-60P-201ENST00000517239 ACKR4Q9NPB9 350 aa3.65□□□□□ -1.83
RNU4-60P-201ENST00000517239 RNF146Q9NTX7 359 aa3.65□□□□□ -1.83
RNU4-60P-201ENST00000517239 SMPD4Q9NXE4 827 aa3.65□□□□□ -1.83
RNU4-60P-201ENST00000517239 SPHK1Q9NYA1 384 aa3.65□□□□□ -1.83
RNU4-60P-201ENST00000517239 WDR45Q9Y484 360 aa3.65□□□□□ -1.83
RNU4-60P-201ENST00000517239 GAKO14976 1311 aa3.65□□□□□ -1.83
RNU4-60P-201ENST00000517239 YJEFN3A6XGL0 299 aa3.64□□□□□ -1.83
RNU4-60P-201ENST00000517239 LINC00473A8K010 186 aa3.64□□□□□ -1.83
RNU4-60P-201ENST00000517239 TARM1B6A8C7 271 aa3.64□□□□□ -1.83
RNU4-60P-201ENST00000517239 NPIPB6E9PJ23 425 aa3.64□□□□□ -1.83
RNU4-60P-201ENST00000517239 E9PMD0 336 aa3.64□□□□□ -1.83
RNU4-60P-201ENST00000517239 SGK494L7N484 410 aa3.64□□□□□ -1.83
RNU4-60P-201ENST00000517239 HSPA12AO43301 675 aa3.64□□□□□ -1.83
RNU4-60P-201ENST00000517239 SCGNO76038 276 aa3.64□□□□□ -1.83
RNU4-60P-201ENST00000517239 PGK1P00558 417 aa3.64□□□□□ -1.83
RNU4-60P-201ENST00000517239 MCF2P10911 925 aa3.64□□□□□ -1.83
RNU4-60P-201ENST00000517239 TNNI1P19237 187 aa3.64□□□□□ -1.83
RNU4-60P-201ENST00000517239 GSTM3P21266 225 aa3.64□□□□□ -1.83
RNU4-60P-201ENST00000517239 NT5EP21589 574 aa3.64□□□□□ -1.83
RNU4-60P-201ENST00000517239 PPP2R1BP30154 601 aa3.64□□□□□ -1.83
RNU4-60P-201ENST00000517239 LCN1P31025 176 aa3.64□□□□□ -1.83
RNU4-60P-201ENST00000517239 STX2P32856 288 aa3.64□□□□□ -1.83
RNU4-60P-201ENST00000517239 S100A5P33763 92 aa3.64□□□□□ -1.83
RNU4-60P-201ENST00000517239 PTGS2P35354 604 aa3.64□□□□□ -1.83
RNU4-60P-201ENST00000517239 CCT3P49368 545 aaKnown RBP3.64□□□□□ -1.83
RNU4-60P-201ENST00000517239 RAB9AP51151 201 aa3.64□□□□□ -1.83
RNU4-60P-201ENST00000517239 VAMP7P51809 220 aa3.64□□□□□ -1.83
RNU4-60P-201ENST00000517239 CDH6P55285 790 aa3.64□□□□□ -1.83
RNU4-60P-201ENST00000517239 HNRNPH2P55795 449 aaKnown RBP3.64□□□□□ -1.83
RNU4-60P-201ENST00000517239 MAZP56270 477 aaKnown RBP3.64□□□□□ -1.83
RNU4-60P-201ENST00000517239 DAOAP59103 153 aa3.64□□□□□ -1.83
RNU4-60P-201ENST00000517239 YWHAGP61981 247 aaKnown RBP eCLIP3.64□□□□□ -1.83
RNU4-60P-201ENST00000517239 HOXA4Q00056 320 aaPredicted RBP3.64□□□□□ -1.83
RNU4-60P-201ENST00000517239 GABPAQ06546 454 aa3.64□□□□□ -1.83
RNU4-60P-201ENST00000517239 FZD5Q13467 585 aa3.64□□□□□ -1.83
RNU4-60P-201ENST00000517239 RSPO4Q2I0M5 234 aaPredicted RBP3.64□□□□□ -1.83
RNU4-60P-201ENST00000517239 ZNF528Q3MIS6 628 aa3.64□□□□□ -1.83
RNU4-60P-201ENST00000517239 FAM69BQ5VUD6 431 aa3.64□□□□□ -1.83
RNU4-60P-201ENST00000517239 MLIPQ5VWP3 458 aa3.64□□□□□ -1.83
RNU4-60P-201ENST00000517239 SPECC1LQ69YQ0 1117 aa3.64□□□□□ -1.83
RNU4-60P-201ENST00000517239 RTL6Q6ICC9 239 aa3.64□□□□□ -1.83
RNU4-60P-201ENST00000517239 SLC25A25Q6KCM7 469 aa3.64□□□□□ -1.83
RNU4-60P-201ENST00000517239 TRIM65Q6PJ69 517 aa3.64□□□□□ -1.83
RNU4-60P-201ENST00000517239 TMEM220Q6QAJ8 160 aa3.64□□□□□ -1.83
RNU4-60P-201ENST00000517239 TMEM107Q6UX40 140 aa3.64□□□□□ -1.83
RNU4-60P-201ENST00000517239 ZNF841Q6ZN19 808 aa3.64□□□□□ -1.83
RNU4-60P-201ENST00000517239 SLC29A4Q7RTT9 530 aa3.64□□□□□ -1.83
RNU4-60P-201ENST00000517239 DPY19L4Q7Z388 723 aa3.64□□□□□ -1.83
RNU4-60P-201ENST00000517239 PATL1Q86TB9 770 aaKnown RBP3.64□□□□□ -1.83
RNU4-60P-201ENST00000517239 PARGQ86W56 976 aa3.64□□□□□ -1.83
RNU4-60P-201ENST00000517239 VRK2Q86Y07 508 aa3.64□□□□□ -1.83
RNU4-60P-201ENST00000517239 NKAIN4Q8IVV8 208 aa3.64□□□□□ -1.83
RNU4-60P-201ENST00000517239 MMD2Q8IY49 270 aa3.64□□□□□ -1.83
RNU4-60P-201ENST00000517239 SLC7A5P1Q8MH63 180 aa3.64□□□□□ -1.83
RNU4-60P-201ENST00000517239 GTPBP8Q8N3Z3 284 aaPredicted RBP3.64□□□□□ -1.83
RNU4-60P-201ENST00000517239 TEX45Q8NA69 505 aa3.64□□□□□ -1.83
RNU4-60P-201ENST00000517239 SYT14Q8NB59 555 aa3.64□□□□□ -1.83
RNU4-60P-201ENST00000517239 C7orf57Q8NEG2 295 aa3.64□□□□□ -1.83
RNU4-60P-201ENST00000517239 ZNF548Q8NEK5 533 aaPredicted RBP3.64□□□□□ -1.83
RNU4-60P-201ENST00000517239 OR2AK2Q8NG84 335 aa3.64□□□□□ -1.83
RNU4-60P-201ENST00000517239 OR14A16Q8NHC5 309 aa3.64□□□□□ -1.83
RNU4-60P-201ENST00000517239 WDR36Q8NI36 951 aaKnown RBP3.64□□□□□ -1.83
RNU4-60P-201ENST00000517239 PAQR8Q8TEZ7 354 aa3.64□□□□□ -1.83
RNU4-60P-201ENST00000517239 ZG16BQ96DA0 208 aa3.64□□□□□ -1.83
RNU4-60P-201ENST00000517239 SH3YL1Q96HL8 342 aaPredicted RBP3.64□□□□□ -1.83
RNU4-60P-201ENST00000517239 ZBED3Q96IU2 234 aaPredicted RBP3.64□□□□□ -1.83
RNU4-60P-201ENST00000517239 RBM41Q96IZ5 413 aaKnown RBP3.64□□□□□ -1.83
RNU4-60P-201ENST00000517239 SGK494Q96LW2 274 aa3.64□□□□□ -1.83
RNU4-60P-201ENST00000517239 FAM20AQ96MK3 541 aa3.64□□□□□ -1.83
RNU4-60P-201ENST00000517239 GFM1Q96RP9 751 aaKnown RBP3.64□□□□□ -1.83
RNU4-60P-201ENST00000517239 CCT8L2Q96SF2 557 aa3.64□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms