RNA–Protein interactions for RNA: ENST00000508170.5

PDGFRA-206, Transcript of platelet derived growth factor receptor alpha, humanhuman

TSL 1 (best) BASIC

Gene PDGFRA, Length 2,202 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-206ENST00000508170 PRSS58Q8IYP2 241 aa7.09□□□□□ -1.27
PDGFRA-206ENST00000508170 RBFAQ8N0V3 343 aa7.09□□□□□ -1.27
PDGFRA-206ENST00000508170 NAGSQ8N159 534 aa7.09□□□□□ -1.27
PDGFRA-206ENST00000508170 LINC00528Q8N1L1 170 aa7.09□□□□□ -1.27
PDGFRA-206ENST00000508170 TRAM1L1Q8N609 369 aa7.09□□□□□ -1.27
PDGFRA-206ENST00000508170 CCDC112Q8NEF3 446 aa7.09□□□□□ -1.27
PDGFRA-206ENST00000508170 ENGASEQ8NFI3 743 aa7.09□□□□□ -1.27
PDGFRA-206ENST00000508170 OR8K1Q8NGG5 319 aa7.09□□□□□ -1.27
PDGFRA-206ENST00000508170 LHX4Q969G2 390 aa7.09□□□□□ -1.27
PDGFRA-206ENST00000508170 HHIPL1Q96JK4 782 aa7.09□□□□□ -1.27
PDGFRA-206ENST00000508170 PDLIM2Q96JY6 352 aa7.09□□□□□ -1.27
PDGFRA-206ENST00000508170 HEXIM2Q96MH2 286 aaKnown RBP7.09□□□□□ -1.27
PDGFRA-206ENST00000508170 ZNF578Q96N58 590 aaPredicted RBP7.09□□□□□ -1.27
PDGFRA-206ENST00000508170 MBOAT7Q96N66 472 aa7.09□□□□□ -1.27
PDGFRA-206ENST00000508170 SLC46A1Q96NT5 459 aa7.09□□□□□ -1.27
PDGFRA-206ENST00000508170 TGS1Q96RS0 853 aaKnown RBP7.09□□□□□ -1.27
PDGFRA-206ENST00000508170 CPNE1Q99829 537 aa7.09□□□□□ -1.27
PDGFRA-206ENST00000508170 MTHFD2LQ9H903 347 aaPredicted RBP7.09□□□□□ -1.27
PDGFRA-206ENST00000508170 MYOZ2Q9NPC6 264 aa7.09□□□□□ -1.27
PDGFRA-206ENST00000508170 SAMSN1Q9NSI8 373 aaKnown RBP7.09□□□□□ -1.27
PDGFRA-206ENST00000508170 DNMT3LQ9UJW3 386 aa7.09□□□□□ -1.27
PDGFRA-206ENST00000508170 PITPNC1Q9UKF7 332 aa7.09□□□□□ -1.27
PDGFRA-206ENST00000508170 MRPS17Q9Y2R5 130 aaKnown RBP7.09□□□□□ -1.27
PDGFRA-206ENST00000508170 STARD10Q9Y365 291 aa7.09□□□□□ -1.27
PDGFRA-206ENST00000508170 URGCP-MRPS24S4R325 110 aa7.09□□□□□ -1.27
PDGFRA-206ENST00000508170 ALKQ9UM73 1620 aa7.09□□□□□ -1.28
PDGFRA-206ENST00000508170 A0A1B0GVL5 298 aa7.08□□□□□ -1.28
PDGFRA-206ENST00000508170 E9PLN8 166 aa7.08□□□□□ -1.28
PDGFRA-206ENST00000508170 MSH3P20585 1137 aa7.08□□□□□ -1.28
PDGFRA-206ENST00000508170 GJC1P36383 396 aa7.08□□□□□ -1.28
PDGFRA-206ENST00000508170 SIRPAP78324 504 aa7.08□□□□□ -1.28
PDGFRA-206ENST00000508170 CCZ1BP86790 482 aa7.08□□□□□ -1.28
PDGFRA-206ENST00000508170 CCZ1P86791 482 aaPredicted RBP7.08□□□□□ -1.28
PDGFRA-206ENST00000508170 HSPB3Q12988 150 aa7.08□□□□□ -1.28
PDGFRA-206ENST00000508170 ACOX1Q15067 660 aa7.08□□□□□ -1.28
PDGFRA-206ENST00000508170 POM121L1PQ3SYA9 428 aa7.08□□□□□ -1.28
PDGFRA-206ENST00000508170 GXYLT1Q4G148 440 aa7.08□□□□□ -1.28
PDGFRA-206ENST00000508170 AASDHQ4L235 1098 aaPredicted RBP7.08□□□□□ -1.28
PDGFRA-206ENST00000508170 C19orf54Q5BKX5 351 aa7.08□□□□□ -1.28
PDGFRA-206ENST00000508170 XKR6Q5GH73 641 aa7.08□□□□□ -1.28
PDGFRA-206ENST00000508170 GPR107Q5VW38 600 aa7.08□□□□□ -1.28
PDGFRA-206ENST00000508170 RHBDD2Q6NTF9 364 aa7.08□□□□□ -1.28
PDGFRA-206ENST00000508170 FBXO42Q6P3S6 717 aa7.08□□□□□ -1.28
PDGFRA-206ENST00000508170 LRRC8BQ6P9F7 803 aa7.08□□□□□ -1.28
PDGFRA-206ENST00000508170 CXXC5Q7LFL8 322 aaKnown RBP7.08□□□□□ -1.28
PDGFRA-206ENST00000508170 SLC38A4Q969I6 547 aa7.08□□□□□ -1.28
PDGFRA-206ENST00000508170 NTAN1Q96AB6 310 aa7.08□□□□□ -1.28
PDGFRA-206ENST00000508170 FUBP1Q96AE4 644 aaKnown RBP7.08□□□□□ -1.28
PDGFRA-206ENST00000508170 DACT3Q96B18 629 aaPredicted RBP7.08□□□□□ -1.28
PDGFRA-206ENST00000508170 DYDC2Q96IM9 177 aa7.08□□□□□ -1.28
PDGFRA-206ENST00000508170 DNAJC1Q96KC8 554 aaKnown RBP7.08□□□□□ -1.28
PDGFRA-206ENST00000508170 RPL10LQ96L21 214 aaKnown RBP7.08□□□□□ -1.28
PDGFRA-206ENST00000508170 CLIC6Q96NY7 704 aa7.08□□□□□ -1.28
PDGFRA-206ENST00000508170 CASD1Q96PB1 797 aa7.08□□□□□ -1.28
PDGFRA-206ENST00000508170 VKORC1Q9BQB6 163 aa7.08□□□□□ -1.28
PDGFRA-206ENST00000508170 APOL2Q9BQE5 337 aa7.08□□□□□ -1.28
PDGFRA-206ENST00000508170 ST6GALNAC5Q9BVH7 336 aa7.08□□□□□ -1.28
PDGFRA-206ENST00000508170 CEP41Q9BYV8 373 aa7.08□□□□□ -1.28
PDGFRA-206ENST00000508170 TRIM9Q9C026 710 aa7.08□□□□□ -1.28
PDGFRA-206ENST00000508170 SLC38A1Q9H2H9 487 aa7.08□□□□□ -1.28
PDGFRA-206ENST00000508170 DPEP3Q9H4B8 488 aa7.08□□□□□ -1.28
PDGFRA-206ENST00000508170 OR2S2Q9NQN1 319 aa7.08□□□□□ -1.28
PDGFRA-206ENST00000508170 EXD2Q9NVH0 621 aa7.08□□□□□ -1.28
PDGFRA-206ENST00000508170 ANKRD10Q9NXR5 420 aa7.08□□□□□ -1.28
PDGFRA-206ENST00000508170 FLVCR2Q9UPI3 526 aa7.08□□□□□ -1.28
PDGFRA-206ENST00000508170 AGLP35573 1532 aa7.08□□□□□ -1.28
PDGFRA-206ENST00000508170 CDC42BPGQ6DT37 1551 aa7.08□□□□□ -1.28
PDGFRA-206ENST00000508170 KIF20BQ96Q89 1820 aa7.08□□□□□ -1.28
PDGFRA-206ENST00000508170 MCIDASD6RGH6 385 aa7.08□□□□□ -1.28
PDGFRA-206ENST00000508170 NPIPB11E5RHQ5 1161 aa7.08□□□□□ -1.28
PDGFRA-206ENST00000508170 H0YGN5 161 aa7.08□□□□□ -1.28
PDGFRA-206ENST00000508170 LIN7AO14910 233 aaPredicted RBP7.08□□□□□ -1.28
PDGFRA-206ENST00000508170 SMIM24O75264 130 aa7.08□□□□□ -1.28
PDGFRA-206ENST00000508170 OR2F2O95006 317 aa7.08□□□□□ -1.28
PDGFRA-206ENST00000508170 TFPTP0C1Z6 253 aa7.08□□□□□ -1.28
PDGFRA-206ENST00000508170 ELFN1P0C7U0 828 aa7.08□□□□□ -1.28
PDGFRA-206ENST00000508170 CHRNB1P11230 501 aa7.08□□□□□ -1.28
PDGFRA-206ENST00000508170 HK1P19367 917 aa7.08□□□□□ -1.28
PDGFRA-206ENST00000508170 KCNA3P22001 575 aa7.08□□□□□ -1.28
PDGFRA-206ENST00000508170 UGT1A4P22310 534 aa7.08□□□□□ -1.28
PDGFRA-206ENST00000508170 PRPH2P23942 346 aa7.08□□□□□ -1.28
PDGFRA-206ENST00000508170 UGT1A3P35503 534 aa7.08□□□□□ -1.28
PDGFRA-206ENST00000508170 UGT1A5P35504 534 aa7.08□□□□□ -1.28
PDGFRA-206ENST00000508170 TOB1P50616 345 aaPredicted RBP7.08□□□□□ -1.28
PDGFRA-206ENST00000508170 LILRA4P59901 499 aa7.08□□□□□ -1.28
PDGFRA-206ENST00000508170 ALKBH1Q13686 389 aaKnown RBP7.08□□□□□ -1.28
PDGFRA-206ENST00000508170 NR1D2Q14995 579 aa7.08□□□□□ -1.28
PDGFRA-206ENST00000508170 PPP1R3AQ16821 1122 aa7.08□□□□□ -1.28
PDGFRA-206ENST00000508170 MICBQ29980 383 aa7.08□□□□□ -1.28
PDGFRA-206ENST00000508170 C5orf64Q2M2E5 130 aa7.08□□□□□ -1.28
PDGFRA-206ENST00000508170 FAM90A2PQ658T7 463 aa7.08□□□□□ -1.28
PDGFRA-206ENST00000508170 NIPAL3Q6P499 406 aa7.08□□□□□ -1.28
PDGFRA-206ENST00000508170 KCNIP4Q6PIL6 250 aa7.08□□□□□ -1.28
PDGFRA-206ENST00000508170 FAM198BQ6UWH4 519 aa7.08□□□□□ -1.28
PDGFRA-206ENST00000508170 TMEM107Q6UX40 140 aa7.08□□□□□ -1.28
PDGFRA-206ENST00000508170 SLC16A9Q7RTY1 509 aa7.08□□□□□ -1.28
PDGFRA-206ENST00000508170 SYT9Q86SS6 491 aa7.08□□□□□ -1.28
PDGFRA-206ENST00000508170 SLC26A11Q86WA9 606 aa7.08□□□□□ -1.28
PDGFRA-206ENST00000508170 RP9Q8TA86 221 aaKnown RBP7.08□□□□□ -1.28
PDGFRA-206ENST00000508170 ACTL9Q8TC94 416 aa7.08□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms