RNA–Protein interactions for RNA: ENST00000504380.1

PDLIM7-212, Transcript of PDZ and LIM domain 7, humanhuman

TSL 2

Gene PDLIM7, Length 556 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-212ENST00000504380 QSOX2Q6ZRP7 698 aa12.45□□□□□ -0.42
PDLIM7-212ENST00000504380 ANKRD37Q7Z713 158 aa12.45□□□□□ -0.42
PDLIM7-212ENST00000504380 SCUBE1Q8IWY4 988 aa12.45□□□□□ -0.42
PDLIM7-212ENST00000504380 HOMEZQ8IX15 550 aa12.45□□□□□ -0.42
PDLIM7-212ENST00000504380 ZNF595Q8IYB9 648 aa12.45□□□□□ -0.42
PDLIM7-212ENST00000504380 PLPP5Q8NEB5 264 aa12.45□□□□□ -0.42
PDLIM7-212ENST00000504380 PUM2Q8TB72 1066 aaKnown RBP eCLIP12.45□□□□□ -0.42
PDLIM7-212ENST00000504380 DNAJB14Q8TBM8 379 aa12.45□□□□□ -0.42
PDLIM7-212ENST00000504380 ADAMTS17Q8TE56 1095 aa12.45□□□□□ -0.42
PDLIM7-212ENST00000504380 ADAMTS18Q8TE60 1221 aa12.45□□□□□ -0.42
PDLIM7-212ENST00000504380 MAELQ96JY0 434 aaKnown RBP12.45□□□□□ -0.42
PDLIM7-212ENST00000504380 WDR41Q9HAD4 459 aa12.45□□□□□ -0.42
PDLIM7-212ENST00000504380 KCNK13Q9HB14 408 aa12.45□□□□□ -0.42
PDLIM7-212ENST00000504380 MYNNQ9NPC7 610 aa12.45□□□□□ -0.42
PDLIM7-212ENST00000504380 PRDM9Q9NQV7 894 aa12.45□□□□□ -0.42
PDLIM7-212ENST00000504380 PNO1Q9NRX1 252 aaKnown RBP12.45□□□□□ -0.42
PDLIM7-212ENST00000504380 SEMA3GQ9NS98 782 aa12.45□□□□□ -0.42
PDLIM7-212ENST00000504380 MS4A12Q9NXJ0 267 aa12.45□□□□□ -0.42
PDLIM7-212ENST00000504380 MRPS33Q9Y291 106 aaKnown RBP12.45□□□□□ -0.42
PDLIM7-212ENST00000504380 IGKV3D-11A0A0A0MRZ8 115 aa12.44□□□□□ -0.42
PDLIM7-212ENST00000504380 ZNF891A8MT65 544 aaPredicted RBP12.44□□□□□ -0.42
PDLIM7-212ENST00000504380 GUCY1B2O75343 617 aa12.44□□□□□ -0.42
PDLIM7-212ENST00000504380 VPS4BO75351 444 aa12.44□□□□□ -0.42
PDLIM7-212ENST00000504380 ERAL1O75616 437 aaKnown RBP12.44□□□□□ -0.42
PDLIM7-212ENST00000504380 MMP11P24347 488 aa12.44□□□□□ -0.42
PDLIM7-212ENST00000504380 LSP1P33241 339 aa12.44□□□□□ -0.42
PDLIM7-212ENST00000504380 HSD17B7P56937 341 aa12.44□□□□□ -0.42
PDLIM7-212ENST00000504380 OR4D2P58180 307 aa12.44□□□□□ -0.42
PDLIM7-212ENST00000504380 DUSP2Q05923 314 aa12.44□□□□□ -0.42
PDLIM7-212ENST00000504380 CDC20Q12834 499 aa12.44□□□□□ -0.42
PDLIM7-212ENST00000504380 PTGR1Q14914 329 aa12.44□□□□□ -0.42
PDLIM7-212ENST00000504380 SFT2D3Q587I9 215 aa12.44□□□□□ -0.42
PDLIM7-212ENST00000504380 C19orf48Q6RUI8 117 aa12.44□□□□□ -0.42
PDLIM7-212ENST00000504380 TMEM205Q6UW68 189 aa12.44□□□□□ -0.42
PDLIM7-212ENST00000504380 KIRREL2Q6UWL6 708 aa12.44□□□□□ -0.42
PDLIM7-212ENST00000504380 DGAT2L6Q6ZPD8 337 aa12.44□□□□□ -0.42
PDLIM7-212ENST00000504380 MRGPREQ86SM8 312 aa12.44□□□□□ -0.42
PDLIM7-212ENST00000504380 TMEM132CQ8N3T6 1108 aa12.44□□□□□ -0.42
PDLIM7-212ENST00000504380 KRTCAP2Q8N6L1 136 aa12.44□□□□□ -0.42
PDLIM7-212ENST00000504380 ACTRT2Q8TDY3 377 aa12.44□□□□□ -0.42
PDLIM7-212ENST00000504380 METTL21AQ8WXB1 218 aa12.44□□□□□ -0.42
PDLIM7-212ENST00000504380 EXOSC8Q96B26 276 aaKnown RBP12.44□□□□□ -0.42
PDLIM7-212ENST00000504380 PPWD1Q96BP3 646 aaKnown RBP12.44□□□□□ -0.42
PDLIM7-212ENST00000504380 METTL2AQ96IZ6 378 aaKnown RBP12.44□□□□□ -0.42
PDLIM7-212ENST00000504380 FAIM2Q9BWQ8 316 aa12.44□□□□□ -0.42
PDLIM7-212ENST00000504380 ALOXE3Q9BYJ1 711 aa12.44□□□□□ -0.42
PDLIM7-212ENST00000504380 TRIM55Q9BYV6 548 aa12.44□□□□□ -0.42
PDLIM7-212ENST00000504380 FAM107BQ9H098 131 aa12.44□□□□□ -0.42
PDLIM7-212ENST00000504380 CES1P1Q9UKY3 287 aa12.44□□□□□ -0.42
PDLIM7-212ENST00000504380 EIF3LQ9Y262 564 aaKnown RBP12.44□□□□□ -0.42
PDLIM7-212ENST00000504380 TMED5Q9Y3A6 229 aa12.44□□□□□ -0.42
PDLIM7-212ENST00000504380 MMACHCQ9Y4U1 282 aa12.44□□□□□ -0.42
PDLIM7-212ENST00000504380 IGSF10Q6WRI0 2623 aa12.43□□□□□ -0.42
PDLIM7-212ENST00000504380 A0A0G2JND7 137 aa12.43□□□□□ -0.42
PDLIM7-212ENST00000504380 C1orf226A1L170 272 aa12.43□□□□□ -0.42
PDLIM7-212ENST00000504380 C9JVG2 144 aa12.43□□□□□ -0.42
PDLIM7-212ENST00000504380 E9PBE3 544 aa12.43□□□□□ -0.42
PDLIM7-212ENST00000504380 KLHL41O60662 606 aa12.43□□□□□ -0.42
PDLIM7-212ENST00000504380 SEC24DO94855 1032 aaPredicted RBP12.43□□□□□ -0.42
PDLIM7-212ENST00000504380 TGDSO95455 350 aa12.43□□□□□ -0.42
PDLIM7-212ENST00000504380 GPR75O95800 540 aa12.43□□□□□ -0.42
PDLIM7-212ENST00000504380 IGHEP01854 428 aa12.43□□□□□ -0.42
PDLIM7-212ENST00000504380 IFNA16P05015 189 aa12.43□□□□□ -0.42
PDLIM7-212ENST00000504380 MAPK1P28482 360 aa12.43□□□□□ -0.42
PDLIM7-212ENST00000504380 FEN1P39748 380 aaKnown RBP12.43□□□□□ -0.42
PDLIM7-212ENST00000504380 CXADRP78310 365 aa12.43□□□□□ -0.42
PDLIM7-212ENST00000504380 ACTN3Q08043 901 aaPredicted RBP12.43□□□□□ -0.42
PDLIM7-212ENST00000504380 STX4Q12846 297 aa12.43□□□□□ -0.42
PDLIM7-212ENST00000504380 CHAF1BQ13112 559 aa12.43□□□□□ -0.42
PDLIM7-212ENST00000504380 DEFB109BQ30KR1 87 aa12.43□□□□□ -0.42
PDLIM7-212ENST00000504380 ZNF385BQ569K4 471 aa12.43□□□□□ -0.42
PDLIM7-212ENST00000504380 OR52E8Q6IFG1 317 aa12.43□□□□□ -0.42
PDLIM7-212ENST00000504380 SLC48A1Q6P1K1 146 aa12.43□□□□□ -0.42
PDLIM7-212ENST00000504380 ACAD11Q709F0 780 aa12.43□□□□□ -0.42
PDLIM7-212ENST00000504380 MED25Q71SY5 747 aa12.43□□□□□ -0.42
PDLIM7-212ENST00000504380 SPATA19Q7Z5L4 167 aa12.43□□□□□ -0.42
PDLIM7-212ENST00000504380 CPEB2Q7Z5Q1 589 aaKnown RBP12.43□□□□□ -0.42
PDLIM7-212ENST00000504380 RAB43Q86YS6 212 aa12.43□□□□□ -0.42
PDLIM7-212ENST00000504380 TICAM1Q8IUC6 712 aa12.43□□□□□ -0.42
PDLIM7-212ENST00000504380 OR11G2Q8NGC1 345 aa12.43□□□□□ -0.42
PDLIM7-212ENST00000504380 OR4K14Q8NGD5 310 aa12.43□□□□□ -0.42
PDLIM7-212ENST00000504380 CEP70Q8NHQ1 597 aa12.43□□□□□ -0.42
PDLIM7-212ENST00000504380 TANKQ92844 425 aa12.43□□□□□ -0.42
PDLIM7-212ENST00000504380 KLHL29Q96CT2 875 aa12.43□□□□□ -0.42
PDLIM7-212ENST00000504380 CHMP6Q96FZ7 201 aa12.43□□□□□ -0.42
PDLIM7-212ENST00000504380 CATSPER2Q96P56 530 aa12.43□□□□□ -0.42
PDLIM7-212ENST00000504380 TMEM120AQ9BXJ8 343 aa12.43□□□□□ -0.42
PDLIM7-212ENST00000504380 TCF7L2Q9NQB0 619 aa12.43□□□□□ -0.42
PDLIM7-212ENST00000504380 P4HTMQ9NXG6 502 aa12.43□□□□□ -0.42
PDLIM7-212ENST00000504380 NOP53Q9NZM5 478 aaKnown RBP12.43□□□□□ -0.42
PDLIM7-212ENST00000504380 FBXL4Q9UKA2 621 aa12.43□□□□□ -0.42
PDLIM7-212ENST00000504380 UTS2RQ9UKP6 389 aa12.43□□□□□ -0.42
PDLIM7-212ENST00000504380 HELZ2Q9BYK8 2649 aaKnown RBP12.43□□□□□ -0.42
PDLIM7-212ENST00000504380 CROCCQ5TZA2 2017 aa12.43□□□□□ -0.42
PDLIM7-212ENST00000504380 SMG1Q96Q15 3661 aaKnown RBP12.43□□□□□ -0.42
PDLIM7-212ENST00000504380 LOC400499M0QZD8 3231 aa12.42□□□□□ -0.42
PDLIM7-212ENST00000504380 LOC102723996A0A087X1L8 192 aa12.42□□□□□ -0.42
PDLIM7-212ENST00000504380 TCRBV16S1A1N1A0A5B0 115 aa12.42□□□□□ -0.42
PDLIM7-212ENST00000504380 ARGFXA6NJG6 315 aa12.42□□□□□ -0.42
PDLIM7-212ENST00000504380 K7ENP7 123 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms