RNA–Protein interactions for RNA: ENST00000502773.5

PDGFC-203, Transcript of platelet derived growth factor C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFC, Length 4,165 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-203ENST00000502773 UAP1L1Q3KQV9 507 aa7.06□□□□□ -1.28
PDGFC-203ENST00000502773 AKIRIN2Q53H80 203 aa7.06□□□□□ -1.28
PDGFC-203ENST00000502773 EEF1AKMT2Q5JPI9 291 aaKnown RBP7.06□□□□□ -1.28
PDGFC-203ENST00000502773 TMEM184AQ6ZMB5 413 aa7.06□□□□□ -1.28
PDGFC-203ENST00000502773 GDPGP1Q6ZNW5 385 aa7.06□□□□□ -1.28
PDGFC-203ENST00000502773 RBM23Q86U06 439 aaKnown RBP7.06□□□□□ -1.28
PDGFC-203ENST00000502773 ANKRD13BQ86YJ7 626 aa7.06□□□□□ -1.28
PDGFC-203ENST00000502773 LSM14AQ8ND56 463 aaKnown RBP7.06□□□□□ -1.28
PDGFC-203ENST00000502773 SLC38A4Q969I6 547 aa7.06□□□□□ -1.28
PDGFC-203ENST00000502773 RERGQ96A58 199 aaPredicted RBP7.06□□□□□ -1.28
PDGFC-203ENST00000502773 NEURL3Q96EH8 262 aa7.06□□□□□ -1.28
PDGFC-203ENST00000502773 FBXL20Q96IG2 436 aa7.06□□□□□ -1.28
PDGFC-203ENST00000502773 ZNF300Q96RE9 604 aaPredicted RBP7.06□□□□□ -1.28
PDGFC-203ENST00000502773 FAM129BQ96TA1 746 aa7.06□□□□□ -1.28
PDGFC-203ENST00000502773 IER2Q9BTL4 223 aa7.06□□□□□ -1.28
PDGFC-203ENST00000502773 SLC17A9Q9BYT1 436 aa7.06□□□□□ -1.28
PDGFC-203ENST00000502773 ZDHHC5Q9C0B5 715 aa7.06□□□□□ -1.28
PDGFC-203ENST00000502773 TRPC4Q9UBN4 977 aa7.06□□□□□ -1.28
PDGFC-203ENST00000502773 RAB23Q9ULC3 237 aa7.06□□□□□ -1.28
PDGFC-203ENST00000502773 SPATA2Q9UM82 520 aa7.06□□□□□ -1.28
PDGFC-203ENST00000502773 TBC1D3DA0A087WVF3 549 aa7.06□□□□□ -1.28
PDGFC-203ENST00000502773 TBC1D3IA0A087WXS9 549 aa7.06□□□□□ -1.28
PDGFC-203ENST00000502773 TBC1D3EA0A087X179 549 aa7.06□□□□□ -1.28
PDGFC-203ENST00000502773 TBC1D3KA0A087X1G2 549 aa7.06□□□□□ -1.28
PDGFC-203ENST00000502773 TBC1D3FA6NER0 549 aaPredicted RBP7.06□□□□□ -1.28
PDGFC-203ENST00000502773 TBC1D3LB9A6J9 549 aa7.06□□□□□ -1.28
PDGFC-203ENST00000502773 PTGES3LE9PB15 166 aa7.06□□□□□ -1.28
PDGFC-203ENST00000502773 GPR39O43194 453 aa7.06□□□□□ -1.28
PDGFC-203ENST00000502773 SLC28A2O43868 658 aa7.06□□□□□ -1.28
PDGFC-203ENST00000502773 SEC14L2O76054 403 aa7.06□□□□□ -1.28
PDGFC-203ENST00000502773 CTSLP07711 333 aa7.06□□□□□ -1.28
PDGFC-203ENST00000502773 TBC1D3HP0C7X1 549 aa7.06□□□□□ -1.28
PDGFC-203ENST00000502773 GDI1P31150 447 aa7.06□□□□□ -1.28
PDGFC-203ENST00000502773 RUNX1T1Q06455 604 aa7.06□□□□□ -1.28
PDGFC-203ENST00000502773 CDK5R2Q13319 367 aa7.06□□□□□ -1.28
PDGFC-203ENST00000502773 SELPLGQ14242 412 aa7.06□□□□□ -1.28
PDGFC-203ENST00000502773 LRRC73Q5JTD7 316 aa7.06□□□□□ -1.28
PDGFC-203ENST00000502773 TOR1AIP1Q5JTV8 583 aa7.06□□□□□ -1.28
PDGFC-203ENST00000502773 CLVS2Q5SYC1 327 aa7.06□□□□□ -1.28
PDGFC-203ENST00000502773 TBC1D3GQ6DHY5 549 aa7.06□□□□□ -1.28
PDGFC-203ENST00000502773 TBC1D3CQ6IPX1 549 aa7.06□□□□□ -1.28
PDGFC-203ENST00000502773 ADGRD2Q7Z7M1 963 aa7.06□□□□□ -1.28
PDGFC-203ENST00000502773 TBC1D3Q8IZP1 549 aaPredicted RBP7.06□□□□□ -1.28
PDGFC-203ENST00000502773 OR13F1Q8NGS4 319 aa7.06□□□□□ -1.28
PDGFC-203ENST00000502773 OR14C36Q8NHC7 312 aa7.06□□□□□ -1.28
PDGFC-203ENST00000502773 LILRB4Q8NHJ6 448 aa7.06□□□□□ -1.28
PDGFC-203ENST00000502773 DOK1Q99704 481 aa7.06□□□□□ -1.28
PDGFC-203ENST00000502773 MS4A8Q9BY19 250 aa7.06□□□□□ -1.28
PDGFC-203ENST00000502773 SAV1Q9H4B6 383 aaPredicted RBP7.06□□□□□ -1.28
PDGFC-203ENST00000502773 ANKRD19PQ9H560 264 aa7.06□□□□□ -1.28
PDGFC-203ENST00000502773 KIR3DX1Q9H7L2 352 aa7.06□□□□□ -1.28
PDGFC-203ENST00000502773 FBXL12Q9NXK8 326 aa7.06□□□□□ -1.28
PDGFC-203ENST00000502773 CCDC59Q9P031 241 aaKnown RBP7.06□□□□□ -1.28
PDGFC-203ENST00000502773 H2AFY2Q9P0M6 372 aaPredicted RBP7.06□□□□□ -1.28
PDGFC-203ENST00000502773 ERGIC3Q9Y282 383 aa7.06□□□□□ -1.28
PDGFC-203ENST00000502773 PCDHGB5Q9Y5G0 923 aa7.06□□□□□ -1.28
PDGFC-203ENST00000502773 CLDN25C9JDP6 229 aa7.06□□□□□ -1.28
PDGFC-203ENST00000502773 BTN3A3O00478 584 aa7.06□□□□□ -1.28
PDGFC-203ENST00000502773 H1F0P07305 194 aaKnown RBP7.06□□□□□ -1.28
PDGFC-203ENST00000502773 FHP07954 510 aa7.06□□□□□ -1.28
PDGFC-203ENST00000502773 PSMB9P28065 219 aa7.06□□□□□ -1.28
PDGFC-203ENST00000502773 NTHL1P78549 312 aa7.06□□□□□ -1.28
PDGFC-203ENST00000502773 SEMG2Q02383 582 aa7.06□□□□□ -1.28
PDGFC-203ENST00000502773 ILF3Q12906 894 aaKnown RBP eCLIP7.06□□□□□ -1.28
PDGFC-203ENST00000502773 BNIP3Q12983 259 aa7.06□□□□□ -1.28
PDGFC-203ENST00000502773 LARS2Q15031 903 aaKnown RBP7.06□□□□□ -1.28
PDGFC-203ENST00000502773 SF3B4Q15427 424 aaKnown RBP eCLIP7.06□□□□□ -1.28
PDGFC-203ENST00000502773 SF1Q15637 639 aaKnown RBP7.06□□□□□ -1.28
PDGFC-203ENST00000502773 PXDC1Q5TGL8 231 aa7.06□□□□□ -1.28
PDGFC-203ENST00000502773 ABHD13Q7L211 337 aa7.06□□□□□ -1.28
PDGFC-203ENST00000502773 LGI4Q8N135 537 aa7.06□□□□□ -1.28
PDGFC-203ENST00000502773 FAM46DQ8NEK8 389 aa7.06□□□□□ -1.28
PDGFC-203ENST00000502773 SUN3Q8TAQ9 357 aa7.06□□□□□ -1.28
PDGFC-203ENST00000502773 GAB3Q8WWW8 586 aa7.06□□□□□ -1.28
PDGFC-203ENST00000502773 LCN9Q8WX39 176 aa7.06□□□□□ -1.28
PDGFC-203ENST00000502773 SORCS1Q8WY21 1168 aa7.06□□□□□ -1.28
PDGFC-203ENST00000502773 HRASLS5Q96KN8 279 aa7.06□□□□□ -1.28
PDGFC-203ENST00000502773 PITX2Q99697 317 aa7.06□□□□□ -1.28
PDGFC-203ENST00000502773 C1QTNF2Q9BXJ5 285 aa7.06□□□□□ -1.28
PDGFC-203ENST00000502773 GABARAPL3Q9BY60 117 aa7.06□□□□□ -1.28
PDGFC-203ENST00000502773 OR51B5Q9H339 312 aa7.06□□□□□ -1.28
PDGFC-203ENST00000502773 SERHL2Q9H4I8 314 aa7.06□□□□□ -1.28
PDGFC-203ENST00000502773 POLMQ9NP87 494 aaPredicted RBP7.06□□□□□ -1.28
PDGFC-203ENST00000502773 MRPS33Q9Y291 106 aaKnown RBP7.06□□□□□ -1.28
PDGFC-203ENST00000502773 CLPXO76031 633 aa7.05□□□□□ -1.28
PDGFC-203ENST00000502773 MED26O95402 600 aa7.05□□□□□ -1.28
PDGFC-203ENST00000502773 MLLT3P42568 568 aaPredicted RBP7.05□□□□□ -1.28
PDGFC-203ENST00000502773 GZMMP51124 257 aa7.05□□□□□ -1.28
PDGFC-203ENST00000502773 POM121L1PQ3SYA9 428 aa7.05□□□□□ -1.28
PDGFC-203ENST00000502773 ALKBH2Q6NS38 261 aa7.05□□□□□ -1.28
PDGFC-203ENST00000502773 CEACAM20Q6UY09 585 aa7.05□□□□□ -1.28
PDGFC-203ENST00000502773 USP43Q70EL4 1123 aa7.05□□□□□ -1.28
PDGFC-203ENST00000502773 ASCC1Q8N9N2 400 aaKnown RBP7.05□□□□□ -1.28
PDGFC-203ENST00000502773 CHDHQ8NE62 594 aaPredicted RBP7.05□□□□□ -1.28
PDGFC-203ENST00000502773 FOXJ1Q92949 421 aa7.05□□□□□ -1.28
PDGFC-203ENST00000502773 RFKQ969G6 155 aa7.05□□□□□ -1.28
PDGFC-203ENST00000502773 SLC35B4Q969S0 331 aa7.05□□□□□ -1.28
PDGFC-203ENST00000502773 MRPL38Q96DV4 380 aaKnown RBP7.05□□□□□ -1.28
PDGFC-203ENST00000502773 MED30Q96HR3 178 aa7.05□□□□□ -1.28
PDGFC-203ENST00000502773 WDR92Q96MX6 357 aa7.05□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms