RNA–Protein interactions for RNA: ENST00000496896.1

TRIM4-205, Transcript of tripartite motif containing 4, humanhuman

TSL 5

Gene TRIM4, Length 601 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4-205ENST00000496896 CASP1P29466 404 aa3.44□□□□□ -1.86
TRIM4-205ENST00000496896 CTNNA1P35221 906 aaKnown RBP3.44□□□□□ -1.86
TRIM4-205ENST00000496896 NF2P35240 595 aa3.44□□□□□ -1.86
TRIM4-205ENST00000496896 CRKLP46109 303 aaKnown RBP3.44□□□□□ -1.86
TRIM4-205ENST00000496896 LIG4P49917 911 aa3.44□□□□□ -1.86
TRIM4-205ENST00000496896 VAMP7P51809 220 aa3.44□□□□□ -1.86
TRIM4-205ENST00000496896 ZNF131P52739 623 aa3.44□□□□□ -1.86
TRIM4-205ENST00000496896 MAPK12P53778 367 aa3.44□□□□□ -1.86
TRIM4-205ENST00000496896 PTENP60484 403 aa3.44□□□□□ -1.86
TRIM4-205ENST00000496896 PAX8Q06710 450 aa3.44□□□□□ -1.86
TRIM4-205ENST00000496896 ENPEPQ07075 957 aa3.44□□□□□ -1.86
TRIM4-205ENST00000496896 KLHL30Q0D2K2 578 aa3.44□□□□□ -1.86
TRIM4-205ENST00000496896 CUL3Q13618 768 aa3.44□□□□□ -1.86
TRIM4-205ENST00000496896 PTPRCAPQ14761 206 aa3.44□□□□□ -1.86
TRIM4-205ENST00000496896 LETM2Q2VYF4 491 aa3.44□□□□□ -1.86
TRIM4-205ENST00000496896 GARNL3Q5VVW2 1013 aa3.44□□□□□ -1.86
TRIM4-205ENST00000496896 H2AFVQ71UI9 128 aa3.44□□□□□ -1.86
TRIM4-205ENST00000496896 DZIP1Q86YF9 867 aaKnown RBP3.44□□□□□ -1.86
TRIM4-205ENST00000496896 SLC37A3Q8NCC5 494 aa3.44□□□□□ -1.86
TRIM4-205ENST00000496896 CCDC197Q8NCU1 140 aa3.44□□□□□ -1.86
TRIM4-205ENST00000496896 OR4K1Q8NGD4 311 aa3.44□□□□□ -1.86
TRIM4-205ENST00000496896 TBCKQ8TEA7 893 aa3.44□□□□□ -1.86
TRIM4-205ENST00000496896 MAIP1Q8WWC4 291 aa3.44□□□□□ -1.86
TRIM4-205ENST00000496896 THOC1Q96FV9 657 aaKnown RBP3.44□□□□□ -1.86
TRIM4-205ENST00000496896 IFT74Q96LB3 600 aa3.44□□□□□ -1.86
TRIM4-205ENST00000496896 CCDC114Q96M63 670 aa3.44□□□□□ -1.86
TRIM4-205ENST00000496896 DGAT2Q96PD7 388 aa3.44□□□□□ -1.86
TRIM4-205ENST00000496896 OVOL2Q9BRP0 275 aa3.44□□□□□ -1.86
TRIM4-205ENST00000496896 RAB11FIP5Q9BXF6 653 aa3.44□□□□□ -1.86
TRIM4-205ENST00000496896 OLAHQ9NV23 265 aa3.44□□□□□ -1.86
TRIM4-205ENST00000496896 PRR34Q9NV39 138 aa3.44□□□□□ -1.86
TRIM4-205ENST00000496896 HAO2Q9NYQ3 351 aa3.44□□□□□ -1.86
TRIM4-205ENST00000496896 CPSF2Q9P2I0 782 aaKnown RBP3.44□□□□□ -1.86
TRIM4-205ENST00000496896 MTRF1LQ9UGC7 380 aaKnown RBP3.44□□□□□ -1.86
TRIM4-205ENST00000496896 ARMCX3Q9UH62 379 aaPredicted RBP3.44□□□□□ -1.86
TRIM4-205ENST00000496896 ANAPC2Q9UJX6 822 aa3.44□□□□□ -1.86
TRIM4-205ENST00000496896 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP3.44□□□□□ -1.86
TRIM4-205ENST00000496896 PCDHGB4Q9UN71 923 aa3.44□□□□□ -1.86
TRIM4-205ENST00000496896 RPL26L1Q9UNX3 145 aaKnown RBP3.44□□□□□ -1.86
TRIM4-205ENST00000496896 TMED3Q9Y3Q3 217 aa3.44□□□□□ -1.86
TRIM4-205ENST00000496896 AHDC1Q5TGY3 1603 aaPredicted RBP3.44□□□□□ -1.86
TRIM4-205ENST00000496896 A0A1W2PPM1 405 aa3.43□□□□□ -1.86
TRIM4-205ENST00000496896 VGLL3A8MV65 326 aa3.43□□□□□ -1.86
TRIM4-205ENST00000496896 A8MV72 311 aaPredicted RBP3.43□□□□□ -1.86
TRIM4-205ENST00000496896 E7ENQ6 273 aa3.43□□□□□ -1.86
TRIM4-205ENST00000496896 MAPK13O15264 365 aa3.43□□□□□ -1.86
TRIM4-205ENST00000496896 P4HA2O15460 535 aa3.43□□□□□ -1.86
TRIM4-205ENST00000496896 RAD51CO43502 376 aa3.43□□□□□ -1.86
TRIM4-205ENST00000496896 MGRN1O60291 552 aa3.43□□□□□ -1.86
TRIM4-205ENST00000496896 NOL4O94818 638 aa3.43□□□□□ -1.86
TRIM4-205ENST00000496896 KRT14P02533 472 aa3.43□□□□□ -1.86
TRIM4-205ENST00000496896 SAGP10523 405 aaPredicted RBP3.43□□□□□ -1.86
TRIM4-205ENST00000496896 RPL35AP18077 110 aaKnown RBP3.43□□□□□ -1.86
TRIM4-205ENST00000496896 CHRNA3P32297 505 aa3.43□□□□□ -1.86
TRIM4-205ENST00000496896 HSD17B3P37058 310 aa3.43□□□□□ -1.86
TRIM4-205ENST00000496896 SLC1A4P43007 532 aa3.43□□□□□ -1.86
TRIM4-205ENST00000496896 LHX1P48742 406 aa3.43□□□□□ -1.86
TRIM4-205ENST00000496896 RPS8P62241 208 aaKnown RBP3.43□□□□□ -1.86
TRIM4-205ENST00000496896 SNRPFP62306 86 aaKnown RBP3.43□□□□□ -1.86
TRIM4-205ENST00000496896 DYNLL1P63167 89 aaKnown RBP3.43□□□□□ -1.86
TRIM4-205ENST00000496896 IRX4P78413 519 aa3.43□□□□□ -1.86
TRIM4-205ENST00000496896 CAV1Q03135 178 aa3.43□□□□□ -1.86
TRIM4-205ENST00000496896 GFPT1Q06210 699 aaPredicted RBP3.43□□□□□ -1.86
TRIM4-205ENST00000496896 PRKG2Q13237 762 aa3.43□□□□□ -1.86
TRIM4-205ENST00000496896 ALCAMQ13740 583 aa3.43□□□□□ -1.86
TRIM4-205ENST00000496896 ZKSCAN8Q15776 578 aaPredicted RBP3.43□□□□□ -1.86
TRIM4-205ENST00000496896 EXT1Q16394 746 aa3.43□□□□□ -1.86
TRIM4-205ENST00000496896 EXOC3L4Q17RC7 722 aa3.43□□□□□ -1.86
TRIM4-205ENST00000496896 ODF2Q5BJF6 829 aa3.43□□□□□ -1.86
TRIM4-205ENST00000496896 ANKRD20A8PQ5CZ79 823 aa3.43□□□□□ -1.86
TRIM4-205ENST00000496896 CMPK2Q5EBM0 449 aa3.43□□□□□ -1.86
TRIM4-205ENST00000496896 ERMARDQ5T6L9 678 aa3.43□□□□□ -1.86
TRIM4-205ENST00000496896 PPP1R2P3Q6NXS1 205 aa3.43□□□□□ -1.86
TRIM4-205ENST00000496896 ALKBH5Q6P6C2 394 aaKnown RBP3.43□□□□□ -1.86
TRIM4-205ENST00000496896 TRMT10CQ7L0Y3 403 aaKnown RBP3.43□□□□□ -1.86
TRIM4-205ENST00000496896 PEX26Q7Z412 305 aa3.43□□□□□ -1.86
TRIM4-205ENST00000496896 RIBC1Q8N443 379 aaPredicted RBP3.43□□□□□ -1.86
TRIM4-205ENST00000496896 FAM89BQ8N5H3 189 aa3.43□□□□□ -1.86
TRIM4-205ENST00000496896 UBL4BQ8N7F7 174 aa3.43□□□□□ -1.86
TRIM4-205ENST00000496896 MIPOL1Q8TD10 442 aa3.43□□□□□ -1.86
TRIM4-205ENST00000496896 CTNNBL1Q8WYA6 563 aaPredicted RBP3.43□□□□□ -1.86
TRIM4-205ENST00000496896 TLCD1Q96CP7 247 aa3.43□□□□□ -1.86
TRIM4-205ENST00000496896 DNAJC19Q96DA6 116 aa3.43□□□□□ -1.86
TRIM4-205ENST00000496896 CHMP6Q96FZ7 201 aa3.43□□□□□ -1.86
TRIM4-205ENST00000496896 SLC45A3Q96JT2 553 aa3.43□□□□□ -1.86
TRIM4-205ENST00000496896 MBOAT7Q96N66 472 aa3.43□□□□□ -1.86
TRIM4-205ENST00000496896 GCNAQ96QF7 691 aa3.43□□□□□ -1.86
TRIM4-205ENST00000496896 FMO2Q99518 471 aa3.43□□□□□ -1.86
TRIM4-205ENST00000496896 ERP44Q9BS26 406 aa3.43□□□□□ -1.86
TRIM4-205ENST00000496896 TDRD1Q9BXT4 1180 aaKnown RBP3.43□□□□□ -1.86
TRIM4-205ENST00000496896 GPR88Q9GZN0 384 aa3.43□□□□□ -1.86
TRIM4-205ENST00000496896 GANQ9H2C0 597 aa3.43□□□□□ -1.86
TRIM4-205ENST00000496896 MTHFD2LQ9H903 347 aaPredicted RBP3.43□□□□□ -1.86
TRIM4-205ENST00000496896 KCNMB3Q9NPA1 279 aa3.43□□□□□ -1.86
TRIM4-205ENST00000496896 HOMER3Q9NSC5 361 aa3.43□□□□□ -1.86
TRIM4-205ENST00000496896 MORF4L1Q9UBU8 362 aa3.43□□□□□ -1.86
TRIM4-205ENST00000496896 CHORDC1Q9UHD1 332 aaPredicted RBP3.43□□□□□ -1.86
TRIM4-205ENST00000496896 PCYOX1Q9UHG3 505 aa3.43□□□□□ -1.86
TRIM4-205ENST00000496896 TP53TG3Q9ULZ0 132 aa3.43□□□□□ -1.86
TRIM4-205ENST00000496896 WDR83OSQ9Y284 106 aa3.43□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms