RNA–Protein interactions for RNA: ENST00000496385.5

HPS4-217, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 2,772 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-217ENST00000496385 DPH7Q9BTV6 452 aa8.66□□□□□ -1.02
HPS4-217ENST00000496385 KATNB1Q9BVA0 655 aa8.66□□□□□ -1.02
HPS4-217ENST00000496385 DNTTIP1Q9H147 329 aa8.66□□□□□ -1.02
HPS4-217ENST00000496385 ABCG4Q9H172 646 aa8.66□□□□□ -1.02
HPS4-217ENST00000496385 DPAGT1Q9H3H5 408 aa8.66□□□□□ -1.02
HPS4-217ENST00000496385 EQTNQ9NQ60 294 aa8.66□□□□□ -1.02
HPS4-217ENST00000496385 TAS2R13Q9NYV9 303 aa8.66□□□□□ -1.02
HPS4-217ENST00000496385 HCN2Q9UL51 889 aa8.66□□□□□ -1.02
HPS4-217ENST00000496385 CCL27Q9Y4X3 112 aa8.66□□□□□ -1.02
HPS4-217ENST00000496385 TNFRSF11BO00300 401 aa8.66□□□□□ -1.02
HPS4-217ENST00000496385 AKAP8O43823 692 aaKnown RBP8.66□□□□□ -1.02
HPS4-217ENST00000496385 RASGRP1O95267 797 aa8.66□□□□□ -1.02
HPS4-217ENST00000496385 FGBP02675 491 aa8.66□□□□□ -1.02
HPS4-217ENST00000496385 NMBP08949 121 aa8.66□□□□□ -1.02
HPS4-217ENST00000496385 SMIM6P0DI80 62 aa8.66□□□□□ -1.02
HPS4-217ENST00000496385 SSTR4P31391 388 aa8.66□□□□□ -1.02
HPS4-217ENST00000496385 AGFG1P52594 562 aaKnown RBP8.66□□□□□ -1.02
HPS4-217ENST00000496385 MBTD1Q05BQ5 628 aa8.66□□□□□ -1.02
HPS4-217ENST00000496385 SP140Q13342 867 aa8.66□□□□□ -1.02
HPS4-217ENST00000496385 PCBP2Q15366 365 aaKnown RBP eCLIP8.66□□□□□ -1.02
HPS4-217ENST00000496385 PLK5Q496M5 336 aa8.66□□□□□ -1.02
HPS4-217ENST00000496385 SLC39A12Q504Y0 691 aa8.66□□□□□ -1.02
HPS4-217ENST00000496385 IL31Q6EBC2 164 aa8.66□□□□□ -1.02
HPS4-217ENST00000496385 RTN4RL1Q86UN2 441 aaPredicted RBP8.66□□□□□ -1.02
HPS4-217ENST00000496385 PDZD3Q86UT5 571 aa8.66□□□□□ -1.02
HPS4-217ENST00000496385 ATPAF2Q8N5M1 289 aa8.66□□□□□ -1.02
HPS4-217ENST00000496385 OR6C4Q8NGE1 309 aa8.66□□□□□ -1.02
HPS4-217ENST00000496385 SETD7Q8WTS6 366 aaKnown RBP8.66□□□□□ -1.02
HPS4-217ENST00000496385 SCARB1Q8WTV0 552 aa8.66□□□□□ -1.02
HPS4-217ENST00000496385 ASB12Q8WXK4 309 aa8.66□□□□□ -1.02
HPS4-217ENST00000496385 LINC01599Q8WXQ3 324 aa8.66□□□□□ -1.02
HPS4-217ENST00000496385 ADAMTS14Q8WXS8 1223 aa8.66□□□□□ -1.02
HPS4-217ENST00000496385 ACOT12Q8WYK0 555 aa8.66□□□□□ -1.02
HPS4-217ENST00000496385 CELF6Q96J87 481 aaKnown RBP8.66□□□□□ -1.02
HPS4-217ENST00000496385 TBATAQ96M53 351 aa8.66□□□□□ -1.02
HPS4-217ENST00000496385 ADAM2Q99965 735 aa8.66□□□□□ -1.02
HPS4-217ENST00000496385 IER2Q9BTL4 223 aa8.66□□□□□ -1.02
HPS4-217ENST00000496385 TTYH1Q9H313 450 aaPredicted RBP8.66□□□□□ -1.02
HPS4-217ENST00000496385 NMUR1Q9HB89 426 aa8.66□□□□□ -1.02
HPS4-217ENST00000496385 B3GAT2Q9NPZ5 323 aa8.66□□□□□ -1.02
HPS4-217ENST00000496385 SERHLQ9NQF3 203 aa8.66□□□□□ -1.02
HPS4-217ENST00000496385 BABAM2Q9NXR7 383 aa8.66□□□□□ -1.02
HPS4-217ENST00000496385 TAS2R16Q9NYV7 291 aa8.66□□□□□ -1.02
HPS4-217ENST00000496385 REV1Q9UBZ9 1251 aa8.66□□□□□ -1.02
HPS4-217ENST00000496385 CYB5R1Q9UHQ9 305 aa8.66□□□□□ -1.02
HPS4-217ENST00000496385 RPL36Q9Y3U8 105 aaKnown RBP8.66□□□□□ -1.02
HPS4-217ENST00000496385 PIPSLA2A3N6 862 aa8.65□□□□□ -1.02
HPS4-217ENST00000496385 LINC00587B1AMM8 73 aa8.65□□□□□ -1.02
HPS4-217ENST00000496385 J3KR12 359 aa8.65□□□□□ -1.02
HPS4-217ENST00000496385 GPR171O14626 319 aa8.65□□□□□ -1.02
HPS4-217ENST00000496385 PRKYO43930 277 aa8.65□□□□□ -1.02
HPS4-217ENST00000496385 DIRAS1O95057 198 aa8.65□□□□□ -1.02
HPS4-217ENST00000496385 OTCP00480 354 aa8.65□□□□□ -1.02
HPS4-217ENST00000496385 FABP1P07148 127 aa8.65□□□□□ -1.02
HPS4-217ENST00000496385 S100A3P33764 101 aa8.65□□□□□ -1.02
HPS4-217ENST00000496385 SOX3P41225 446 aa8.65□□□□□ -1.02
HPS4-217ENST00000496385 CHRNA4P43681 627 aa8.65□□□□□ -1.02
HPS4-217ENST00000496385 WNT3AP56704 352 aa8.65□□□□□ -1.02
HPS4-217ENST00000496385 MXD1Q05195 221 aa8.65□□□□□ -1.02
HPS4-217ENST00000496385 MPEG1Q2M385 716 aa8.65□□□□□ -1.02
HPS4-217ENST00000496385 SLC10A6Q3KNW5 377 aa8.65□□□□□ -1.02
HPS4-217ENST00000496385 OVOS1Q6IE37 1185 aa8.65□□□□□ -1.02
HPS4-217ENST00000496385 AFTPHQ6ULP2 937 aa8.65□□□□□ -1.02
HPS4-217ENST00000496385 Q6ZPB1 254 aaPredicted RBP8.65□□□□□ -1.02
HPS4-217ENST00000496385 PTCHD4Q6ZW05 846 aa8.65□□□□□ -1.02
HPS4-217ENST00000496385 SHFQ7M4L6 423 aa8.65□□□□□ -1.02
HPS4-217ENST00000496385 TMEM192Q8IY95 271 aa8.65□□□□□ -1.02
HPS4-217ENST00000496385 FAM46DQ8NEK8 389 aa8.65□□□□□ -1.02
HPS4-217ENST00000496385 NELL2Q99435 816 aa8.65□□□□□ -1.02
HPS4-217ENST00000496385 ZNF251Q9BRH9 671 aa8.65□□□□□ -1.02
HPS4-217ENST00000496385 SLC25A51Q9H1U9 297 aa8.65□□□□□ -1.02
HPS4-217ENST00000496385 KCTD5Q9NXV2 234 aa8.65□□□□□ -1.02
HPS4-217ENST00000496385 ING1Q9UK53 422 aaPredicted RBP8.65□□□□□ -1.02
HPS4-217ENST00000496385 MKL2Q9ULH7 1088 aa8.65□□□□□ -1.02
HPS4-217ENST00000496385 CRYL1Q9Y2S2 319 aa8.65□□□□□ -1.02
HPS4-217ENST00000496385 DERAQ9Y315 318 aa8.65□□□□□ -1.02
HPS4-217ENST00000496385 TRAV6A0A075B6T7 132 aa8.65□□□□□ -1.03
HPS4-217ENST00000496385 LOC101059915A0A1B0GWI6 518 aaPredicted RBP8.65□□□□□ -1.03
HPS4-217ENST00000496385 ARRDC5A6NEK1 342 aa8.65□□□□□ -1.03
HPS4-217ENST00000496385 ZAR1LA6NP61 321 aa8.65□□□□□ -1.03
HPS4-217ENST00000496385 MEIS3P2A8K0S8 358 aa8.65□□□□□ -1.03
HPS4-217ENST00000496385 NUPL2O15504 423 aaKnown RBP8.65□□□□□ -1.03
HPS4-217ENST00000496385 S100A8P05109 93 aa8.65□□□□□ -1.03
HPS4-217ENST00000496385 GPX2P18283 190 aa8.65□□□□□ -1.03
HPS4-217ENST00000496385 PTPN6P29350 595 aa8.65□□□□□ -1.03
HPS4-217ENST00000496385 BDKRB1P46663 353 aa8.65□□□□□ -1.03
HPS4-217ENST00000496385 KCNJ5P48544 419 aa8.65□□□□□ -1.03
HPS4-217ENST00000496385 GATMP50440 423 aa8.65□□□□□ -1.03
HPS4-217ENST00000496385 RABGGTBP53611 331 aa8.65□□□□□ -1.03
HPS4-217ENST00000496385 PSMD4P55036 377 aaKnown RBP8.65□□□□□ -1.03
HPS4-217ENST00000496385 MICBQ29980 383 aa8.65□□□□□ -1.03
HPS4-217ENST00000496385 BCL2L15Q5TBC7 163 aa8.65□□□□□ -1.03
HPS4-217ENST00000496385 PGAP1Q75T13 922 aa8.65□□□□□ -1.03
HPS4-217ENST00000496385 LRRC52Q8N7C0 313 aa8.65□□□□□ -1.03
HPS4-217ENST00000496385 OR52N1Q8NH53 320 aa8.65□□□□□ -1.03
HPS4-217ENST00000496385 SFXN2Q96NB2 322 aa8.65□□□□□ -1.03
HPS4-217ENST00000496385 BBS4Q96RK4 519 aa8.65□□□□□ -1.03
HPS4-217ENST00000496385 TMPRSS13Q9BYE2 586 aa8.65□□□□□ -1.03
HPS4-217ENST00000496385 MS4A7Q9GZW8 240 aaPredicted RBP8.65□□□□□ -1.03
HPS4-217ENST00000496385 ESRP2Q9H6T0 727 aaKnown RBP8.65□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms