RNA–Protein interactions for RNA: ENST00000496116.1

CMSS1-208, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

TSL 1 (best)

Gene CMSS1, Length 2,145 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-208ENST00000496116 VMP1Q96GC9 406 aa10.51□□□□□ -0.73
CMSS1-208ENST00000496116 KXD1Q9BQD3 176 aa10.51□□□□□ -0.73
CMSS1-208ENST00000496116 C1QTNF2Q9BXJ5 285 aa10.51□□□□□ -0.73
CMSS1-208ENST00000496116 WDR12Q9GZL7 423 aaKnown RBP10.51□□□□□ -0.73
CMSS1-208ENST00000496116 MVB12BQ9H7P6 319 aa10.51□□□□□ -0.73
CMSS1-208ENST00000496116 TEX10Q9NXF1 929 aaPredicted RBP10.51□□□□□ -0.73
CMSS1-208ENST00000496116 FBXL12Q9NXK8 326 aa10.51□□□□□ -0.73
CMSS1-208ENST00000496116 P2RX2Q9UBL9 471 aa10.51□□□□□ -0.73
CMSS1-208ENST00000496116 MOSPD1Q9UJG1 213 aa10.51□□□□□ -0.73
CMSS1-208ENST00000496116 DUSP12Q9UNI6 340 aa10.51□□□□□ -0.73
CMSS1-208ENST00000496116 B3GNT3Q9Y2A9 372 aa10.51□□□□□ -0.73
CMSS1-208ENST00000496116 SLC17A4Q9Y2C5 497 aa10.51□□□□□ -0.73
CMSS1-208ENST00000496116 CCDC88CQ9P219 2028 aa10.51□□□□□ -0.73
CMSS1-208ENST00000496116 PRR23AA6NEV1 266 aa10.51□□□□□ -0.73
CMSS1-208ENST00000496116 PDZK1P1A8MUH7 402 aa10.51□□□□□ -0.73
CMSS1-208ENST00000496116 HMGN4O00479 90 aa10.51□□□□□ -0.73
CMSS1-208ENST00000496116 LATO43561 262 aa10.51□□□□□ -0.73
CMSS1-208ENST00000496116 GUCY1B2O75343 617 aa10.51□□□□□ -0.73
CMSS1-208ENST00000496116 CDK1P06493 297 aa10.51□□□□□ -0.73
CMSS1-208ENST00000496116 POU2F1P14859 743 aa10.51□□□□□ -0.73
CMSS1-208ENST00000496116 CD36P16671 472 aa10.51□□□□□ -0.73
CMSS1-208ENST00000496116 CBLP22681 906 aa10.51□□□□□ -0.73
CMSS1-208ENST00000496116 PPP2R1BP30154 601 aa10.51□□□□□ -0.73
CMSS1-208ENST00000496116 NTSP30990 170 aa10.51□□□□□ -0.73
CMSS1-208ENST00000496116 ANXA11P50995 505 aaKnown RBP10.51□□□□□ -0.73
CMSS1-208ENST00000496116 VBP1P61758 197 aa10.51□□□□□ -0.73
CMSS1-208ENST00000496116 LSM3P62310 102 aaKnown RBP10.51□□□□□ -0.73
CMSS1-208ENST00000496116 ABATP80404 500 aa10.51□□□□□ -0.73
CMSS1-208ENST00000496116 PUM1Q14671 1186 aaKnown RBP eCLIP10.51□□□□□ -0.73
CMSS1-208ENST00000496116 SLC9A5Q14940 896 aa10.51□□□□□ -0.73
CMSS1-208ENST00000496116 NDUFAF5Q5TEU4 345 aa10.51□□□□□ -0.73
CMSS1-208ENST00000496116 SZRD1Q7Z422 152 aa10.51□□□□□ -0.73
CMSS1-208ENST00000496116 UBE3DQ7Z6J8 389 aa10.51□□□□□ -0.73
CMSS1-208ENST00000496116 ADCK1Q86TW2 530 aa10.51□□□□□ -0.73
CMSS1-208ENST00000496116 PLD3Q8IV08 490 aa10.51□□□□□ -0.73
CMSS1-208ENST00000496116 CCDC103Q8IW40 242 aa10.51□□□□□ -0.73
CMSS1-208ENST00000496116 OR14C36Q8NHC7 312 aa10.51□□□□□ -0.73
CMSS1-208ENST00000496116 CREB3L4Q8TEY5 395 aa10.51□□□□□ -0.73
CMSS1-208ENST00000496116 GGHQ92820 318 aa10.51□□□□□ -0.73
CMSS1-208ENST00000496116 KLK6Q92876 244 aa10.51□□□□□ -0.73
CMSS1-208ENST00000496116 ELSPBP1Q96BH3 223 aa10.51□□□□□ -0.73
CMSS1-208ENST00000496116 SH3YL1Q96HL8 342 aaPredicted RBP10.51□□□□□ -0.73
CMSS1-208ENST00000496116 SLC35G5Q96KT7 338 aa10.51□□□□□ -0.73
CMSS1-208ENST00000496116 ZNF354BQ96LW1 612 aa10.51□□□□□ -0.73
CMSS1-208ENST00000496116 C17orf62Q9BQA9 187 aa10.51□□□□□ -0.73
CMSS1-208ENST00000496116 DPH7Q9BTV6 452 aa10.51□□□□□ -0.73
CMSS1-208ENST00000496116 SLC17A9Q9BYT1 436 aa10.51□□□□□ -0.73
CMSS1-208ENST00000496116 BTBD1Q9H0C5 482 aa10.51□□□□□ -0.73
CMSS1-208ENST00000496116 XKR8Q9H6D3 395 aa10.51□□□□□ -0.73
CMSS1-208ENST00000496116 FAIMQ9NVQ4 179 aa10.51□□□□□ -0.73
CMSS1-208ENST00000496116 SEC14L3Q9UDX4 400 aa10.51□□□□□ -0.73
CMSS1-208ENST00000496116 GPSM3Q9Y4H4 160 aa10.51□□□□□ -0.73
CMSS1-208ENST00000496116 DOCK9Q9BZ29 2069 aa10.5□□□□□ -0.73
CMSS1-208ENST00000496116 IGKV1-8A0A0C4DH67 115 aa10.5□□□□□ -0.73
CMSS1-208ENST00000496116 PLRG1O43660 514 aaKnown RBP10.5□□□□□ -0.73
CMSS1-208ENST00000496116 OXSR1O95747 527 aaPredicted RBP10.5□□□□□ -0.73
CMSS1-208ENST00000496116 ADAP00813 363 aa10.5□□□□□ -0.73
CMSS1-208ENST00000496116 GASTP01350 101 aa10.5□□□□□ -0.73
CMSS1-208ENST00000496116 DNTTP04053 509 aa10.5□□□□□ -0.73
CMSS1-208ENST00000496116 FUCA1P04066 466 aa10.5□□□□□ -0.73
CMSS1-208ENST00000496116 LCKP06239 509 aa10.5□□□□□ -0.73
CMSS1-208ENST00000496116 CEACAM5P06731 702 aa10.5□□□□□ -0.73
CMSS1-208ENST00000496116 TIE1P35590 1138 aa10.5□□□□□ -0.73
CMSS1-208ENST00000496116 RANBP1P43487 201 aa10.5□□□□□ -0.73
CMSS1-208ENST00000496116 TNFRSF4P43489 277 aa10.5□□□□□ -0.73
CMSS1-208ENST00000496116 ARFIP1P53367 373 aa10.5□□□□□ -0.73
CMSS1-208ENST00000496116 MLLT10P55197 1068 aa10.5□□□□□ -0.73
CMSS1-208ENST00000496116 PTGES3Q15185 160 aaKnown RBP10.5□□□□□ -0.73
CMSS1-208ENST00000496116 UAP1L1Q3KQV9 507 aa10.5□□□□□ -0.73
CMSS1-208ENST00000496116 C2orf27AQ580R0 203 aa10.5□□□□□ -0.73
CMSS1-208ENST00000496116 BHLHB9Q6PI77 547 aa10.5□□□□□ -0.73
CMSS1-208ENST00000496116 STX19Q8N4C7 294 aa10.5□□□□□ -0.73
CMSS1-208ENST00000496116 TMCO5AQ8N6Q1 288 aa10.5□□□□□ -0.73
CMSS1-208ENST00000496116 OR52E1Q8NGJ3 308 aa10.5□□□□□ -0.73
CMSS1-208ENST00000496116 NDNFQ8TB73 568 aa10.5□□□□□ -0.73
CMSS1-208ENST00000496116 APOBEC4Q8WW27 367 aaKnown RBP10.5□□□□□ -0.73
CMSS1-208ENST00000496116 RAB8BQ92930 207 aa10.5□□□□□ -0.73
CMSS1-208ENST00000496116 SLC38A4Q969I6 547 aa10.5□□□□□ -0.73
CMSS1-208ENST00000496116 LGALS12Q96DT0 336 aa10.5□□□□□ -0.73
CMSS1-208ENST00000496116 TEFMQ96QE5 360 aaKnown RBP10.5□□□□□ -0.73
CMSS1-208ENST00000496116 NMNAT1Q9HAN9 279 aaPredicted RBP10.5□□□□□ -0.73
CMSS1-208ENST00000496116 SLC35C2Q9NQQ7 365 aa10.5□□□□□ -0.73
CMSS1-208ENST00000496116 FKBP14Q9NWM8 211 aa10.5□□□□□ -0.73
CMSS1-208ENST00000496116 RHCGQ9UBD6 479 aa10.5□□□□□ -0.73
CMSS1-208ENST00000496116 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP10.5□□□□□ -0.73
CMSS1-208ENST00000496116 A0A0G2JN53 185 aa10.49□□□□□ -0.73
CMSS1-208ENST00000496116 A0A1W2PQU0 124 aa10.49□□□□□ -0.73
CMSS1-208ENST00000496116 SH3D21A4FU49 640 aa10.49□□□□□ -0.73
CMSS1-208ENST00000496116 ANHXE9PGG2 379 aa10.49□□□□□ -0.73
CMSS1-208ENST00000496116 J3QRK9 145 aa10.49□□□□□ -0.73
CMSS1-208ENST00000496116 SLC28A2O43868 658 aa10.49□□□□□ -0.73
CMSS1-208ENST00000496116 CBFA2T3O75081 653 aa10.49□□□□□ -0.73
CMSS1-208ENST00000496116 RECKO95980 971 aa10.49□□□□□ -0.73
CMSS1-208ENST00000496116 GABRB1P18505 474 aa10.49□□□□□ -0.73
CMSS1-208ENST00000496116 C21orf33P30042 268 aaPredicted RBP10.49□□□□□ -0.73
CMSS1-208ENST00000496116 AHRP35869 848 aa10.49□□□□□ -0.73
CMSS1-208ENST00000496116 OPRL1P41146 370 aa10.49□□□□□ -0.73
CMSS1-208ENST00000496116 MAGEA8P43361 318 aa10.49□□□□□ -0.73
CMSS1-208ENST00000496116 NCBP2P52298 156 aaKnown RBP eCLIP10.49□□□□□ -0.73
CMSS1-208ENST00000496116 CRISP1P54107 249 aa10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms