RNA–Protein interactions for RNA: ENST00000494672.1

CCDC66-222, Transcript of coiled-coil domain containing 66, human

TSL 4

Gene CCDC66, Length 577 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CCDC66-222	ENST00000494672	LRPPRC	P42704	1394 aa	Known RBP	4.37	□□□□□ -1.71
CCDC66-222	ENST00000494672	CCDC7	Q96M83	1385 aa		4.37	□□□□□ -1.71
CCDC66-222	ENST00000494672	RAB3GAP2	Q9H2M9	1393 aa		4.37	□□□□□ -1.71
CCDC66-222	ENST00000494672	CASZ1	Q86V15	1759 aa		4.37	□□□□□ -1.71
CCDC66-222	ENST00000494672	MYOM3	Q5VTT5	1437 aa		4.37	□□□□□ -1.71
CCDC66-222	ENST00000494672	ERCC6	Q03468	1493 aa		4.37	□□□□□ -1.71
CCDC66-222	ENST00000494672	PLB1	Q6P1J6	1458 aa		4.37	□□□□□ -1.71
CCDC66-222	ENST00000494672		A0A0J9YYE9	177 aa		4.36	□□□□□ -1.71
CCDC66-222	ENST00000494672		A0A1B0GVL5	298 aa		4.36	□□□□□ -1.71
CCDC66-222	ENST00000494672	SMIM31	A0A1B0GVY4	71 aa		4.36	□□□□□ -1.71
CCDC66-222	ENST00000494672	GNG14	A0A1W2PPG7	69 aa		4.36	□□□□□ -1.71
CCDC66-222	ENST00000494672	FAM149A	A5PLN7	773 aa		4.36	□□□□□ -1.71
CCDC66-222	ENST00000494672	C12orf71	A8MTZ7	269 aa		4.36	□□□□□ -1.71
CCDC66-222	ENST00000494672	LINC00587	B1AMM8	73 aa		4.36	□□□□□ -1.71
CCDC66-222	ENST00000494672	hCG_2039718	K7EN88	272 aa		4.36	□□□□□ -1.71
CCDC66-222	ENST00000494672	TXNDC9	O14530	226 aa		4.36	□□□□□ -1.71
CCDC66-222	ENST00000494672	ITGB1BP1	O14713	200 aa		4.36	□□□□□ -1.71
CCDC66-222	ENST00000494672	TSPAN4	O14817	238 aa		4.36	□□□□□ -1.71
CCDC66-222	ENST00000494672	SLC30A4	O14863	429 aa		4.36	□□□□□ -1.71
CCDC66-222	ENST00000494672	FAM155B	O75949	473 aa		4.36	□□□□□ -1.71
CCDC66-222	ENST00000494672	NOL4	O94818	638 aa		4.36	□□□□□ -1.71
CCDC66-222	ENST00000494672	AK1	P00568	194 aa		4.36	□□□□□ -1.71
CCDC66-222	ENST00000494672	AGT	P01019	485 aa		4.36	□□□□□ -1.71
CCDC66-222	ENST00000494672	PDGFB	P01127	241 aa	Predicted RBP	4.36	□□□□□ -1.71
CCDC66-222	ENST00000494672	CALCA	P01258	141 aa		4.36	□□□□□ -1.71
CCDC66-222	ENST00000494672	TRBC1	P01850	177 aa		4.36	□□□□□ -1.71
CCDC66-222	ENST00000494672	CD3G	P09693	182 aa		4.36	□□□□□ -1.71
CCDC66-222	ENST00000494672	DBT	P11182	482 aa	Known RBP	4.36	□□□□□ -1.71
CCDC66-222	ENST00000494672	HNRNPA2B1	P22626	353 aa	Known RBP	4.36	□□□□□ -1.71
CCDC66-222	ENST00000494672	CMA1	P23946	247 aa		4.36	□□□□□ -1.71
CCDC66-222	ENST00000494672	PTPN6	P29350	595 aa		4.36	□□□□□ -1.71
CCDC66-222	ENST00000494672	CD40LG	P29965	261 aa		4.36	□□□□□ -1.71
CCDC66-222	ENST00000494672	PCK1	P35558	622 aa		4.36	□□□□□ -1.71
CCDC66-222	ENST00000494672	CDKN2C	P42773	168 aa		4.36	□□□□□ -1.71
CCDC66-222	ENST00000494672	ALDH3B2	P48448	385 aa		4.36	□□□□□ -1.71
CCDC66-222	ENST00000494672	CEBPD	P49716	269 aa	Predicted RBP	4.36	□□□□□ -1.71
CCDC66-222	ENST00000494672	ATP5I	P56385	69 aa	Predicted RBP	4.36	□□□□□ -1.71
CCDC66-222	ENST00000494672	CLDN8	P56748	225 aa		4.36	□□□□□ -1.71
CCDC66-222	ENST00000494672	PRKAA1	Q13131	559 aa		4.36	□□□□□ -1.71
CCDC66-222	ENST00000494672	SRSF5	Q13243	272 aa	Known RBP	4.36	□□□□□ -1.71
CCDC66-222	ENST00000494672	IL18	Q14116	193 aa		4.36	□□□□□ -1.71
CCDC66-222	ENST00000494672	GPR176	Q14439	515 aa		4.36	□□□□□ -1.71
CCDC66-222	ENST00000494672	PIGH	Q14442	188 aa	Predicted RBP	4.36	□□□□□ -1.71
CCDC66-222	ENST00000494672	PDK2	Q15119	407 aa		4.36	□□□□□ -1.71
CCDC66-222	ENST00000494672	KCNJ8	Q15842	424 aa		4.36	□□□□□ -1.71
CCDC66-222	ENST00000494672	USF2	Q15853	346 aa	Predicted RBP	4.36	□□□□□ -1.71
CCDC66-222	ENST00000494672	SLC18A3	Q16572	532 aa		4.36	□□□□□ -1.71
CCDC66-222	ENST00000494672	DECR1	Q16698	335 aa		4.36	□□□□□ -1.71
CCDC66-222	ENST00000494672	PNLIPRP3	Q17RR3	467 aa		4.36	□□□□□ -1.71
CCDC66-222	ENST00000494672	EIF2S3L	Q2VIR3	472 aa	Known RBP	4.36	□□□□□ -1.71
CCDC66-222	ENST00000494672	HNRNPA1L2	Q32P51	320 aa	Known RBP	4.36	□□□□□ -1.71
CCDC66-222	ENST00000494672	EDRF1	Q3B7T1	1238 aa		4.36	□□□□□ -1.71
CCDC66-222	ENST00000494672	IQCC	Q4KMZ1	466 aa		4.36	□□□□□ -1.71
CCDC66-222	ENST00000494672	BCL7A	Q4VC05	210 aa		4.36	□□□□□ -1.71
CCDC66-222	ENST00000494672	LBH	Q53QV2	105 aa	Predicted RBP	4.36	□□□□□ -1.71
CCDC66-222	ENST00000494672	FASTKD1	Q53R41	847 aa	Known RBP	4.36	□□□□□ -1.71
CCDC66-222	ENST00000494672	SULT1C3	Q6IMI6	304 aa		4.36	□□□□□ -1.71
CCDC66-222	ENST00000494672	NAPEPLD	Q6IQ20	393 aa		4.36	□□□□□ -1.71
CCDC66-222	ENST00000494672	CDC73	Q6P1J9	531 aa		4.36	□□□□□ -1.71
CCDC66-222	ENST00000494672	KLHL35	Q6PF15	583 aa		4.36	□□□□□ -1.71
CCDC66-222	ENST00000494672	TMEM270	Q6UE05	265 aa		4.36	□□□□□ -1.71
CCDC66-222	ENST00000494672	RBM43	Q6ZSC3	357 aa	Known RBP	4.36	□□□□□ -1.71
CCDC66-222	ENST00000494672	COPS6	Q7L5N1	327 aa		4.36	□□□□□ -1.71
CCDC66-222	ENST00000494672	SHF	Q7M4L6	423 aa		4.36	□□□□□ -1.71
CCDC66-222	ENST00000494672	ZSCAN2	Q7Z7L9	614 aa	Predicted RBP	4.36	□□□□□ -1.71
CCDC66-222	ENST00000494672	IQCH	Q86VS3	1027 aa		4.36	□□□□□ -1.71
CCDC66-222	ENST00000494672	HORMAD1	Q86X24	394 aa		4.36	□□□□□ -1.71
CCDC66-222	ENST00000494672	CYP4Z2P	Q8N1L4	340 aa		4.36	□□□□□ -1.71
CCDC66-222	ENST00000494672	UBE2J2	Q8N2K1	259 aa		4.36	□□□□□ -1.71
CCDC66-222	ENST00000494672	SFRP1	Q8N474	314 aa		4.36	□□□□□ -1.71
CCDC66-222	ENST00000494672	LEMD2	Q8NC56	503 aa		4.36	□□□□□ -1.71
CCDC66-222	ENST00000494672	BPIFC	Q8NFQ6	507 aa		4.36	□□□□□ -1.71
CCDC66-222	ENST00000494672	OR6J1	Q8NGC5	347 aa		4.36	□□□□□ -1.71
CCDC66-222	ENST00000494672	OR4D10	Q8NGI6	311 aa		4.36	□□□□□ -1.71
CCDC66-222	ENST00000494672	ARRDC2	Q8TBH0	407 aa		4.36	□□□□□ -1.71
CCDC66-222	ENST00000494672	SETD6	Q8TBK2	473 aa		4.36	□□□□□ -1.71
CCDC66-222	ENST00000494672	PNPT1	Q8TCS8	783 aa	Known RBP	4.36	□□□□□ -1.71
CCDC66-222	ENST00000494672	KCNG4	Q8TDN1	519 aa		4.36	□□□□□ -1.71
CCDC66-222	ENST00000494672	AGAP11	Q8TF27	550 aa		4.36	□□□□□ -1.71
CCDC66-222	ENST00000494672	TSEN15	Q8WW01	171 aa	Known RBP	4.36	□□□□□ -1.71
CCDC66-222	ENST00000494672	ROBO4	Q8WZ75	1007 aa		4.36	□□□□□ -1.71
CCDC66-222	ENST00000494672	MR1	Q95460	341 aa		4.36	□□□□□ -1.71
CCDC66-222	ENST00000494672	CPNE4	Q96A23	557 aa	Predicted RBP	4.36	□□□□□ -1.71
CCDC66-222	ENST00000494672	MRPL38	Q96DV4	380 aa	Known RBP	4.36	□□□□□ -1.71
CCDC66-222	ENST00000494672	ZIM3	Q96PE6	472 aa		4.36	□□□□□ -1.71
CCDC66-222	ENST00000494672	C12orf57	Q99622	126 aa		4.36	□□□□□ -1.71
CCDC66-222	ENST00000494672	TMEM175	Q9BSA9	504 aa		4.36	□□□□□ -1.71
CCDC66-222	ENST00000494672	LRRC1	Q9BTT6	524 aa		4.36	□□□□□ -1.71
CCDC66-222	ENST00000494672	TEKT3	Q9BXF9	490 aa		4.36	□□□□□ -1.71
CCDC66-222	ENST00000494672	PARD6G	Q9BYG4	376 aa	Predicted RBP	4.36	□□□□□ -1.71
CCDC66-222	ENST00000494672	FTO	Q9C0B1	505 aa	Known RBP eCLIP	4.36	□□□□□ -1.71
CCDC66-222	ENST00000494672	ZYG11B	Q9C0D3	744 aa		4.36	□□□□□ -1.71
CCDC66-222	ENST00000494672	MFF	Q9GZY8	342 aa		4.36	□□□□□ -1.71
CCDC66-222	ENST00000494672	ALX4	Q9H161	411 aa	Predicted RBP	4.36	□□□□□ -1.71
CCDC66-222	ENST00000494672	RNF41	Q9H4P4	317 aa	Predicted RBP	4.36	□□□□□ -1.71
CCDC66-222	ENST00000494672	C11orf49	Q9H6J7	331 aa		4.36	□□□□□ -1.71
CCDC66-222	ENST00000494672	PLGRKT	Q9HBL7	147 aa		4.36	□□□□□ -1.71
CCDC66-222	ENST00000494672	CD209	Q9NNX6	404 aa		4.36	□□□□□ -1.71
CCDC66-222	ENST00000494672	TIGAR	Q9NQ88	270 aa		4.36	□□□□□ -1.71
CCDC66-222	ENST00000494672	ETNK2	Q9NVF9	386 aa		4.36	□□□□□ -1.71

Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms