RNA–Protein interactions for RNA: ENST00000494518.1

SKA1-205, Transcript of spindle and kinetochore associated complex subunit 1, humanhuman

TSL 2

Gene SKA1, Length 746 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1-205ENST00000494518 COPS7AQ9UBW8 275 aa11.68□□□□□ -0.54
SKA1-205ENST00000494518 ACAD8Q9UKU7 415 aa11.68□□□□□ -0.54
SKA1-205ENST00000494518 RNF112Q9ULX5 631 aa11.68□□□□□ -0.54
SKA1-205ENST00000494518 ATG4BQ9Y4P1 393 aa11.68□□□□□ -0.54
SKA1-205ENST00000494518 E7ESA3 106 aa11.67□□□□□ -0.54
SKA1-205ENST00000494518 BCKDKO14874 412 aa11.67□□□□□ -0.54
SKA1-205ENST00000494518 KLK8O60259 260 aa11.67□□□□□ -0.54
SKA1-205ENST00000494518 IGHG3P01860 377 aa11.67□□□□□ -0.54
SKA1-205ENST00000494518 S100BP04271 92 aaPredicted RBP11.67□□□□□ -0.54
SKA1-205ENST00000494518 ENDOUP21128 410 aaKnown RBP11.67□□□□□ -0.54
SKA1-205ENST00000494518 DNAJA1P31689 397 aaKnown RBP11.67□□□□□ -0.54
SKA1-205ENST00000494518 HPDP32754 393 aaPredicted RBP11.67□□□□□ -0.54
SKA1-205ENST00000494518 GGT5P36269 586 aa11.67□□□□□ -0.54
SKA1-205ENST00000494518 ZFP36L2P47974 494 aaKnown RBP11.67□□□□□ -0.54
SKA1-205ENST00000494518 DLX5P56178 289 aa11.67□□□□□ -0.54
SKA1-205ENST00000494518 SERTAD2Q14140 314 aa11.67□□□□□ -0.54
SKA1-205ENST00000494518 HIST2H2ACQ16777 129 aaPredicted RBP11.67□□□□□ -0.54
SKA1-205ENST00000494518 PAGE2BQ5JRK9 111 aa11.67□□□□□ -0.54
SKA1-205ENST00000494518 C1orf185Q5T7R7 199 aa11.67□□□□□ -0.54
SKA1-205ENST00000494518 CES4AQ5XG92 561 aa11.67□□□□□ -0.54
SKA1-205ENST00000494518 HIST2H2AA3Q6FI13 130 aa11.67□□□□□ -0.54
SKA1-205ENST00000494518 SULT1C3Q6IMI6 304 aa11.67□□□□□ -0.54
SKA1-205ENST00000494518 OPN5Q6U736 354 aa11.67□□□□□ -0.54
SKA1-205ENST00000494518 RGS9BPQ6ZS82 235 aa11.67□□□□□ -0.54
SKA1-205ENST00000494518 CREG2Q8IUH2 290 aa11.67□□□□□ -0.54
SKA1-205ENST00000494518 C9orf40Q8IXQ3 194 aa11.67□□□□□ -0.54
SKA1-205ENST00000494518 ZZZ3Q8IYH5 903 aa11.67□□□□□ -0.54
SKA1-205ENST00000494518 GOLM1Q8NBJ4 401 aa11.67□□□□□ -0.54
SKA1-205ENST00000494518 PDPRQ8NCN5 879 aa11.67□□□□□ -0.54
SKA1-205ENST00000494518 OR5L2Q8NGL0 311 aa11.67□□□□□ -0.54
SKA1-205ENST00000494518 ZNF473Q8WTR7 871 aaKnown RBP11.67□□□□□ -0.54
SKA1-205ENST00000494518 KIAA1191Q96A73 305 aa11.67□□□□□ -0.54
SKA1-205ENST00000494518 WDR34Q96EX3 536 aa11.67□□□□□ -0.54
SKA1-205ENST00000494518 TSPAN17Q96FV3 270 aa11.67□□□□□ -0.54
SKA1-205ENST00000494518 DOCK7Q96N67 2140 aa11.67□□□□□ -0.54
SKA1-205ENST00000494518 DGAT2Q96PD7 388 aa11.67□□□□□ -0.54
SKA1-205ENST00000494518 GAL3ST4Q96RP7 486 aa11.67□□□□□ -0.54
SKA1-205ENST00000494518 KRT12Q99456 494 aa11.67□□□□□ -0.54
SKA1-205ENST00000494518 PITHD1Q9GZP4 211 aaPredicted RBP11.67□□□□□ -0.54
SKA1-205ENST00000494518 SLC6A15Q9H2J7 730 aa11.67□□□□□ -0.54
SKA1-205ENST00000494518 DPH5Q9H2P9 285 aa11.67□□□□□ -0.54
SKA1-205ENST00000494518 KCNF1Q9H3M0 494 aa11.67□□□□□ -0.54
SKA1-205ENST00000494518 EHD1Q9H4M9 534 aa11.67□□□□□ -0.54
SKA1-205ENST00000494518 ALG9Q9H6U8 611 aa11.67□□□□□ -0.54
SKA1-205ENST00000494518 LYRM4Q9HD34 91 aa11.67□□□□□ -0.54
SKA1-205ENST00000494518 SAYSD1Q9NPB0 183 aa11.67□□□□□ -0.54
SKA1-205ENST00000494518 NSMCE4AQ9NXX6 385 aa11.67□□□□□ -0.54
SKA1-205ENST00000494518 KCNN3Q9UGI6 736 aa11.67□□□□□ -0.54
SKA1-205ENST00000494518 SEC23IPQ9Y6Y8 1000 aaKnown RBP11.67□□□□□ -0.54
SKA1-205ENST00000494518 TRGV5A0A0B4J1U4 118 aa11.66□□□□□ -0.54
SKA1-205ENST00000494518 OR14I1A6ND48 311 aa11.66□□□□□ -0.54
SKA1-205ENST00000494518 SUPT3HB4E1H0 165 aa11.66□□□□□ -0.54
SKA1-205ENST00000494518 UBXN8O00124 270 aa11.66□□□□□ -0.54
SKA1-205ENST00000494518 AQP7O14520 342 aa11.66□□□□□ -0.54
SKA1-205ENST00000494518 SUPT3HO75486 399 aa11.66□□□□□ -0.54
SKA1-205ENST00000494518 FAM155BO75949 473 aa11.66□□□□□ -0.54
SKA1-205ENST00000494518 RFPL3SP0C7P2 107 aa11.66□□□□□ -0.54
SKA1-205ENST00000494518 CD1EP15812 388 aa11.66□□□□□ -0.54
SKA1-205ENST00000494518 HIST1H1TP22492 207 aaPredicted RBP11.66□□□□□ -0.54
SKA1-205ENST00000494518 TRPC1P48995 793 aa11.66□□□□□ -0.54
SKA1-205ENST00000494518 IST1P53990 364 aa11.66□□□□□ -0.54
SKA1-205ENST00000494518 KCNJ2P63252 427 aa11.66□□□□□ -0.54
SKA1-205ENST00000494518 LAPTM5Q13571 262 aa11.66□□□□□ -0.54
SKA1-205ENST00000494518 SLC10A1Q14973 349 aa11.66□□□□□ -0.54
SKA1-205ENST00000494518 AP5B1Q2VPB7 878 aa11.66□□□□□ -0.54
SKA1-205ENST00000494518 WLSQ5T9L3 541 aa11.66□□□□□ -0.54
SKA1-205ENST00000494518 C18orf63Q68DL7 685 aa11.66□□□□□ -0.54
SKA1-205ENST00000494518 CMC1Q7Z7K0 106 aa11.66□□□□□ -0.54
SKA1-205ENST00000494518 CLYBLQ8N0X4 340 aa11.66□□□□□ -0.54
SKA1-205ENST00000494518 FAM13CQ8NE31 585 aa11.66□□□□□ -0.54
SKA1-205ENST00000494518 PYROXD1Q8WU10 500 aa11.66□□□□□ -0.54
SKA1-205ENST00000494518 SENP5Q96HI0 755 aaPredicted RBP11.66□□□□□ -0.54
SKA1-205ENST00000494518 SGCZQ96LD1 299 aa11.66□□□□□ -0.54
SKA1-205ENST00000494518 JSRP1Q96MG2 331 aaPredicted RBP11.66□□□□□ -0.54
SKA1-205ENST00000494518 RBBP8Q99708 897 aa11.66□□□□□ -0.54
SKA1-205ENST00000494518 TBCDQ9BTW9 1192 aa11.66□□□□□ -0.54
SKA1-205ENST00000494518 PHACTR1Q9C0D0 580 aa11.66□□□□□ -0.54
SKA1-205ENST00000494518 ROGDIQ9GZN7 287 aa11.66□□□□□ -0.54
SKA1-205ENST00000494518 LIME1Q9H400 295 aa11.66□□□□□ -0.54
SKA1-205ENST00000494518 DNAJB12Q9NXW2 375 aaKnown RBP11.66□□□□□ -0.54
SKA1-205ENST00000494518 TXNDC16Q9P2K2 825 aa11.66□□□□□ -0.54
SKA1-205ENST00000494518 PTBP2Q9UKA9 531 aaKnown RBP11.66□□□□□ -0.54
SKA1-205ENST00000494518 L3MBTL1Q9Y468 752 aa11.66□□□□□ -0.54
SKA1-205ENST00000494518 SPACA6W5XKT8 324 aa11.66□□□□□ -0.54
SKA1-205ENST00000494518 A0A1B0GVC2 190 aa11.65□□□□□ -0.54
SKA1-205ENST00000494518 WASHC1A8K0Z3 465 aa11.65□□□□□ -0.54
SKA1-205ENST00000494518 KDM4EB2RXH2 506 aaPredicted RBP11.65□□□□□ -0.54
SKA1-205ENST00000494518 COX7A2P14406 83 aa11.65□□□□□ -0.54
SKA1-205ENST00000494518 STMN1P16949 149 aa11.65□□□□□ -0.54
SKA1-205ENST00000494518 STT3AP46977 705 aa11.65□□□□□ -0.54
SKA1-205ENST00000494518 RAP1GDS1P52306 607 aa11.65□□□□□ -0.54
SKA1-205ENST00000494518 HNRNPH2P55795 449 aaKnown RBP11.65□□□□□ -0.54
SKA1-205ENST00000494518 WNT3P56703 355 aa11.65□□□□□ -0.54
SKA1-205ENST00000494518 ATP6V0D1P61421 351 aa11.65□□□□□ -0.54
SKA1-205ENST00000494518 HERVK_113P63132 956 aa11.65□□□□□ -0.54
SKA1-205ENST00000494518 ERVK-8P63133 956 aa11.65□□□□□ -0.54
SKA1-205ENST00000494518 FOLH1Q04609 750 aa11.65□□□□□ -0.54
SKA1-205ENST00000494518 DLG1Q12959 904 aa11.65□□□□□ -0.54
SKA1-205ENST00000494518 SLAMF1Q13291 335 aa11.65□□□□□ -0.54
SKA1-205ENST00000494518 SLMAPQ14BN4 828 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms