RNA–Protein interactions for RNA: ENST00000485842.5

HPS4-214, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 3

Gene HPS4, Length 973 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-214ENST00000485842 EIF4E1BA6NMX2 242 aaKnown RBP11.08□□□□□ -0.64
HPS4-214ENST00000485842 PGRMC2O15173 223 aa11.08□□□□□ -0.64
HPS4-214ENST00000485842 ABCB7O75027 752 aa11.08□□□□□ -0.64
HPS4-214ENST00000485842 PDGFAP04085 211 aa11.08□□□□□ -0.64
HPS4-214ENST00000485842 PRB1P04280 392 aa11.08□□□□□ -0.64
HPS4-214ENST00000485842 ALPPP05187 535 aa11.08□□□□□ -0.64
HPS4-214ENST00000485842 IL3P08700 152 aa11.08□□□□□ -0.64
HPS4-214ENST00000485842 SFTPCP11686 197 aa11.08□□□□□ -0.64
HPS4-214ENST00000485842 ICAM2P13598 275 aa11.08□□□□□ -0.64
HPS4-214ENST00000485842 TNNI3P19429 210 aa11.08□□□□□ -0.64
HPS4-214ENST00000485842 TRA2BP62995 288 aaKnown RBP11.08□□□□□ -0.64
HPS4-214ENST00000485842 AP2B1P63010 937 aa11.08□□□□□ -0.64
HPS4-214ENST00000485842 PPP2R2AP63151 447 aa11.08□□□□□ -0.64
HPS4-214ENST00000485842 PLIN5Q00G26 463 aa11.08□□□□□ -0.64
HPS4-214ENST00000485842 SERTAD2Q14140 314 aa11.08□□□□□ -0.64
HPS4-214ENST00000485842 ELAVL1Q15717 326 aaKnown RBP11.08□□□□□ -0.64
HPS4-214ENST00000485842 EXT1Q16394 746 aa11.08□□□□□ -0.64
HPS4-214ENST00000485842 SOWAHCQ53LP3 525 aaPredicted RBP11.08□□□□□ -0.64
HPS4-214ENST00000485842 VWA5B1Q5TIE3 1220 aa11.08□□□□□ -0.64
HPS4-214ENST00000485842 ATG16L1Q676U5 607 aa11.08□□□□□ -0.64
HPS4-214ENST00000485842 PLAG1Q6DJT9 500 aa11.08□□□□□ -0.64
HPS4-214ENST00000485842 TCTN3Q6NUS6 607 aa11.08□□□□□ -0.64
HPS4-214ENST00000485842 Q6ZSR9 355 aa11.08□□□□□ -0.64
HPS4-214ENST00000485842 ASB18Q6ZVZ8 466 aa11.08□□□□□ -0.64
HPS4-214ENST00000485842 TRIM42Q8IWZ5 723 aa11.08□□□□□ -0.64
HPS4-214ENST00000485842 HOMEZQ8IX15 550 aa11.08□□□□□ -0.64
HPS4-214ENST00000485842 LSM14AQ8ND56 463 aaKnown RBP11.08□□□□□ -0.64
HPS4-214ENST00000485842 C16orf78Q8WTQ4 265 aa11.08□□□□□ -0.64
HPS4-214ENST00000485842 DYDC1Q8WWB3 177 aa11.08□□□□□ -0.64
HPS4-214ENST00000485842 TM4SF18Q96CE8 201 aa11.08□□□□□ -0.64
HPS4-214ENST00000485842 PPP1R36Q96LQ0 422 aa11.08□□□□□ -0.64
HPS4-214ENST00000485842 DGAT2Q96PD7 388 aa11.08□□□□□ -0.64
HPS4-214ENST00000485842 FAIM2Q9BWQ8 316 aa11.08□□□□□ -0.64
HPS4-214ENST00000485842 C20orf27Q9GZN8 174 aa11.08□□□□□ -0.64
HPS4-214ENST00000485842 ILKAPQ9H0C8 392 aaPredicted RBP11.08□□□□□ -0.64
HPS4-214ENST00000485842 SLC25A18Q9H1K4 315 aa11.08□□□□□ -0.64
HPS4-214ENST00000485842 ZNF552Q9H707 407 aaPredicted RBP11.08□□□□□ -0.64
HPS4-214ENST00000485842 KCNK13Q9HB14 408 aa11.08□□□□□ -0.64
HPS4-214ENST00000485842 C1orf109Q9NX04 203 aa11.08□□□□□ -0.64
HPS4-214ENST00000485842 PTGFRNQ9P2B2 879 aa11.08□□□□□ -0.64
HPS4-214ENST00000485842 GIMAP2Q9UG22 337 aa11.08□□□□□ -0.64
HPS4-214ENST00000485842 DLGAP4Q9Y2H0 992 aa11.08□□□□□ -0.64
HPS4-214ENST00000485842 CCL27Q9Y4X3 112 aa11.08□□□□□ -0.64
HPS4-214ENST00000485842 PCDHA9Q9Y5H5 950 aa11.08□□□□□ -0.64
HPS4-214ENST00000485842 CHD6Q8TD26 2715 aa11.07□□□□□ -0.64
HPS4-214ENST00000485842 ATP6AP2A0A1C7CYW4 349 aa11.07□□□□□ -0.64
HPS4-214ENST00000485842 A0A1W2PS29 197 aa11.07□□□□□ -0.64
HPS4-214ENST00000485842 C1orf226A1L170 272 aa11.07□□□□□ -0.64
HPS4-214ENST00000485842 SYNDIG1LA6NDD5 238 aa11.07□□□□□ -0.64
HPS4-214ENST00000485842 LSM1O15116 133 aaKnown RBP11.07□□□□□ -0.64
HPS4-214ENST00000485842 OR10H2O60403 315 aa11.07□□□□□ -0.64
HPS4-214ENST00000485842 KLHL41O60662 606 aa11.07□□□□□ -0.64
HPS4-214ENST00000485842 ERAL1O75616 437 aaKnown RBP11.07□□□□□ -0.64
HPS4-214ENST00000485842 ATP6AP2O75787 350 aa11.07□□□□□ -0.64
HPS4-214ENST00000485842 SNUPNO95149 360 aaKnown RBP11.07□□□□□ -0.64
HPS4-214ENST00000485842 GPR75O95800 540 aa11.07□□□□□ -0.64
HPS4-214ENST00000485842 JUNP05412 331 aaKnown RBP11.07□□□□□ -0.64
HPS4-214ENST00000485842 COX7A2P14406 83 aa11.07□□□□□ -0.64
HPS4-214ENST00000485842 ALOX15P16050 662 aaPredicted RBP11.07□□□□□ -0.64
HPS4-214ENST00000485842 PIK3R1P27986 724 aa11.07□□□□□ -0.64
HPS4-214ENST00000485842 RPL14P50914 215 aaKnown RBP11.07□□□□□ -0.64
HPS4-214ENST00000485842 SOX8P57073 446 aa11.07□□□□□ -0.64
HPS4-214ENST00000485842 IGLV3-21P80748 117 aaPredicted RBP11.07□□□□□ -0.64
HPS4-214ENST00000485842 ZNF763Q0D2J5 394 aa11.07□□□□□ -0.64
HPS4-214ENST00000485842 NFATC3Q12968 1075 aa11.07□□□□□ -0.64
HPS4-214ENST00000485842 XKR7Q5GH72 579 aa11.07□□□□□ -0.64
HPS4-214ENST00000485842 AGAP7PQ5VUJ5 663 aa11.07□□□□□ -0.64
HPS4-214ENST00000485842 NOXRED1Q6NXP6 359 aa11.07□□□□□ -0.64
HPS4-214ENST00000485842 SLC48A1Q6P1K1 146 aa11.07□□□□□ -0.64
HPS4-214ENST00000485842 GALNT18Q6P9A2 607 aa11.07□□□□□ -0.64
HPS4-214ENST00000485842 LINC00696Q6ZRV3 163 aa11.07□□□□□ -0.64
HPS4-214ENST00000485842 RNF165Q6ZSG1 346 aa11.07□□□□□ -0.64
HPS4-214ENST00000485842 TMEM132CQ8N3T6 1108 aa11.07□□□□□ -0.64
HPS4-214ENST00000485842 KIF2BQ8N4N8 673 aa11.07□□□□□ -0.64
HPS4-214ENST00000485842 DNAJB14Q8TBM8 379 aa11.07□□□□□ -0.64
HPS4-214ENST00000485842 RAB3IL1Q8TBN0 382 aa11.07□□□□□ -0.64
HPS4-214ENST00000485842 M1APQ8TC57 530 aa11.07□□□□□ -0.64
HPS4-214ENST00000485842 DOK4Q8TEW6 326 aa11.07□□□□□ -0.64
HPS4-214ENST00000485842 PPWD1Q96BP3 646 aaKnown RBP11.07□□□□□ -0.64
HPS4-214ENST00000485842 C19orf60Q96EN9 201 aa11.07□□□□□ -0.64
HPS4-214ENST00000485842 C3orf30Q96M34 536 aa11.07□□□□□ -0.64
HPS4-214ENST00000485842 AGAP4Q96P64 663 aa11.07□□□□□ -0.64
HPS4-214ENST00000485842 MANSC1Q9H8J5 431 aa11.07□□□□□ -0.64
HPS4-214ENST00000485842 PFDN4Q9NQP4 134 aa11.07□□□□□ -0.64
HPS4-214ENST00000485842 PNPOQ9NVS9 261 aa11.07□□□□□ -0.64
HPS4-214ENST00000485842 SIRT5Q9NXA8 310 aa11.07□□□□□ -0.64
HPS4-214ENST00000485842 HEY2Q9UBP5 337 aa11.07□□□□□ -0.64
HPS4-214ENST00000485842 MARCOQ9UEW3 520 aaPredicted RBP11.07□□□□□ -0.64
HPS4-214ENST00000485842 EPB41L3Q9Y2J2 1087 aaPredicted RBP11.07□□□□□ -0.64
HPS4-214ENST00000485842 ZNF451Q9Y4E5 1061 aa11.07□□□□□ -0.64
HPS4-214ENST00000485842 CLCA3PQ9Y6N3 262 aa11.07□□□□□ -0.64
HPS4-214ENST00000485842 TRBV11-1A0A0K0K1C0 115 aa11.06□□□□□ -0.64
HPS4-214ENST00000485842 A8MUI8 341 aa11.06□□□□□ -0.64
HPS4-214ENST00000485842 C17orf105B2RV13 164 aa11.06□□□□□ -0.64
HPS4-214ENST00000485842 PEX11AO75192 247 aa11.06□□□□□ -0.64
HPS4-214ENST00000485842 SNNO75324 88 aaPredicted RBP11.06□□□□□ -0.64
HPS4-214ENST00000485842 PRPH2P23942 346 aa11.06□□□□□ -0.64
HPS4-214ENST00000485842 STT3AP46977 705 aa11.06□□□□□ -0.64
HPS4-214ENST00000485842 TERF2Q15554 542 aa11.06□□□□□ -0.64
HPS4-214ENST00000485842 ZNF750Q32MQ0 723 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms